Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 20373171
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20373171 vang-like 1 [Homo sapiens]
(524 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20373171 vang-like 1 [Homo sapiens] 1037 0.0
gi|62955805 vang-like 2 [Homo sapiens] 762 0.0
gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens] 36 0.098
gi|21361337 eukaryotic translation initiation factor 5 [Homo sap... 34 0.37
gi|37537716 eukaryotic translation initiation factor 5 [Homo sap... 34 0.37
gi|239756568 PREDICTED: similar to BCL2-associated transcription... 33 0.83
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 33 0.83
gi|52426743 cisplatin resistance-associated overexpressed protei... 32 1.1
gi|19923485 cisplatin resistance-associated overexpressed protei... 32 1.1
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora... 32 1.4
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 32 1.4
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora... 32 1.4
gi|148746195 trichohyalin [Homo sapiens] 32 1.4
gi|151101449 solute carrier family 4, sodium bicarbonate cotrans... 32 1.4
gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens] 32 1.4
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 32 1.9
gi|197927160 solute carrier family 4, sodium bicarbonate cotrans... 31 2.4
gi|4507025 solute carrier family 4, sodium bicarbonate cotranspo... 31 2.4
gi|148596928 solute carrier family 4, sodium bicarbonate cotrans... 31 2.4
gi|4502399 filensin isoform 1 [Homo sapiens] 31 3.2
gi|239787151 filensin isoform 2 [Homo sapiens] 31 3.2
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 31 3.2
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 31 3.2
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 31 3.2
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 31 3.2
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 31 3.2
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 31 3.2
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 31 3.2
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 31 3.2
gi|26190614 rhotekin 2 [Homo sapiens] 31 3.2
>gi|20373171 vang-like 1 [Homo sapiens]
Length = 524
Score = 1037 bits (2681), Expect = 0.0
Identities = 524/524 (100%), Positives = 524/524 (100%)
Query: 1 MDTESTYSGYSYYSSHSKKSHRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGND 60
MDTESTYSGYSYYSSHSKKSHRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGND
Sbjct: 1 MDTESTYSGYSYYSSHSKKSHRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGND 60
Query: 61 STRTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLG 120
STRTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLG
Sbjct: 61 STRTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLG 120
Query: 121 LLVFLTPIAFILLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMP 180
LLVFLTPIAFILLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMP
Sbjct: 121 LLVFLTPIAFILLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMP 180
Query: 181 RVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYAVSLVDALLFIHYLAIVL 240
RVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYAVSLVDALLFIHYLAIVL
Sbjct: 181 RVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYAVSLVDALLFIHYLAIVL 240
Query: 241 LELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYKDFTIYNPNLLTASKF 300
LELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYKDFTIYNPNLLTASKF
Sbjct: 241 LELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYKDFTIYNPNLLTASKF 300
Query: 301 RAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKAR 360
RAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKAR
Sbjct: 301 RAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKAR 360
Query: 361 LVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSM 420
LVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSM
Sbjct: 361 LVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSM 420
Query: 421 ESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRWLSTQWRLVSDEAVTNGLRDGIV 480
ESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRWLSTQWRLVSDEAVTNGLRDGIV
Sbjct: 421 ESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRWLSTQWRLVSDEAVTNGLRDGIV 480
Query: 481 FVLKCLDFSLVVNVKKIPFIILSEEFIDPKSHKFVLRLQSETSV 524
FVLKCLDFSLVVNVKKIPFIILSEEFIDPKSHKFVLRLQSETSV
Sbjct: 481 FVLKCLDFSLVVNVKKIPFIILSEEFIDPKSHKFVLRLQSETSV 524
>gi|62955805 vang-like 2 [Homo sapiens]
Length = 521
Score = 762 bits (1968), Expect = 0.0
Identities = 383/526 (72%), Positives = 452/526 (85%), Gaps = 7/526 (1%)
Query: 1 MDTESTYSGYSYYSSHSKKSHRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGND 60
MDTES YSGYSY S HS+ S + +R R+RH+S GRG +KSVTIQ P GEPLL N+
Sbjct: 1 MDTESQYSGYSYKSGHSRSSRKHRDR-RDRHRSKSRDGGRG-DKSVTIQAP-GEPLLDNE 57
Query: 61 STRTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLG 120
STR +E +DDNWGETTT +TGTSEHSIS +D+ RI+KDMEDSV LDC R+LG+ + L
Sbjct: 58 STRGDE-RDDNWGETTTVVTGTSEHSISHDDLTRIAKDMEDSVPLDCSRHLGVAAGATLA 116
Query: 121 LLVFLTPIAFILLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMP 180
LL FLTP+AF+LLPP+LWR+ELEPCGT CEGLFIS+AFKLLILL+G+WALFFR+ +A +P
Sbjct: 117 LLSFLTPLAFLLLPPLLWREELEPCGTACEGLFISVAFKLLILLLGSWALFFRRPKASLP 176
Query: 181 RVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYAVSLVDALLFIHYLAIVL 240
RVFV RALL+VL+FL VVSYWLFYGVRILD+R+R+YQG+VQ+AVSLVDALLF+HYLA+VL
Sbjct: 177 RVFVLRALLMVLVFLLVVSYWLFYGVRILDARERSYQGVVQFAVSLVDALLFVHYLAVVL 236
Query: 241 LELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYKDFTIYNPNLLTASKF 300
LELRQLQP FTL+VVRSTDG SRFY++GHLSIQR A+ +LE YY DF +YNP LL K
Sbjct: 237 LELRQLQPQFTLKVVRSTDGASRFYNVGHLSIQRVAVWILEKYYHDFPVYNPALLNLPKS 296
Query: 301 RAAKHMAGLKVYNV--DGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRK 358
AK ++G KVY++ + +NN+TGQSRA+IAAAARRRD+SHNE YYEEAEHERRV+KR+
Sbjct: 297 VLAKKVSGFKVYSLGEENSTNNSTGQSRAVIAAAARRRDNSHNEYYYEEAEHERRVRKRR 356
Query: 359 ARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYH 418
ARLVVAVEEAF HI+RLQ EE+QK P EVMDPREAAQAIF SMARA+QKYLR T+QQ YH
Sbjct: 357 ARLVVAVEEAFTHIKRLQ-EEEQKNPREVMDPREAAQAIFASMARAMQKYLRTTKQQPYH 415
Query: 419 SMESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRWLSTQWRLVSDEAVTNGLRDG 478
+MESILQHL FCIT+ MTPKAFLERYL+AGPT+QY K+RWL+ QW LVS+E VTNGL+DG
Sbjct: 416 TMESILQHLEFCITHDMTPKAFLERYLAAGPTIQYHKERWLAKQWTLVSEEPVTNGLKDG 475
Query: 479 IVFVLKCLDFSLVVNVKKIPFIILSEEFIDPKSHKFVLRLQSETSV 524
IVF+LK DFSLVV+ KK+PF LSEEF+DPKSHKFV+RLQSETSV
Sbjct: 476 IVFLLKRQDFSLVVSTKKVPFFKLSEEFVDPKSHKFVMRLQSETSV 521
>gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens]
Length = 1430
Score = 35.8 bits (81), Expect = 0.098
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 11 SYYSSHSKKSHRQGERTRERHKSPRNKD--------GRGSEKSVTIQPPTGEPLLGNDST 62
SY SS K S + ER +H +N+ R SEK V P P GN
Sbjct: 523 SYPSSEEKSSEKSLERNHLQHLCAQNRGVSSSFDMPKRASEKPVWKLPHPILPFSGNPEF 582
Query: 63 RTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDS 102
N E +TA+T S+S D+ + +K +DS
Sbjct: 583 LKSVTVSSN-SEPSTALTKPRAKSLSAMDVEKCTKPCKDS 621
>gi|21361337 eukaryotic translation initiation factor 5 [Homo
sapiens]
Length = 431
Score = 33.9 bits (76), Expect = 0.37
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 27 TRERHKSPRNKDGR----GSEKSVTIQPPTGEPLLGNDSTRT-EEVQDDNWGETTT 77
T ++ K +N+ G+ GS S PP P N T EE +DD+WGE TT
Sbjct: 153 TGKKEKEKKNRKGKDKENGSVSSSETPPPPPPPNEINPPPHTMEEEEDDDWGEDTT 208
>gi|37537716 eukaryotic translation initiation factor 5 [Homo
sapiens]
Length = 431
Score = 33.9 bits (76), Expect = 0.37
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 27 TRERHKSPRNKDGR----GSEKSVTIQPPTGEPLLGNDSTRT-EEVQDDNWGETTT 77
T ++ K +N+ G+ GS S PP P N T EE +DD+WGE TT
Sbjct: 153 TGKKEKEKKNRKGKDKENGSVSSSETPPPPPPPNEINPPPHTMEEEEDDDWGEDTT 208
>gi|239756568 PREDICTED: similar to BCL2-associated transcription
factor 1 [Homo sapiens]
Length = 869
Score = 32.7 bits (73), Expect = 0.83
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 21 HRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGNDSTRTEEVQDDNWGETTTAIT 80
HR+ ER++ER S +++ RGS K E D ++ + QD + +++A
Sbjct: 697 HRRKERSKERGDSKGSRESRGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSA-- 754
Query: 81 GTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVAS 117
S S +E ++ ++ E + K Y G S
Sbjct: 755 SPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVS 791
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 32.7 bits (73), Expect = 0.83
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 21 HRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGNDSTRTEEVQDDNWGETTTAIT 80
HR+ ER++ER S +++ RGS K E D ++ + QD + +++A
Sbjct: 697 HRRKERSKERGDSKGSRESRGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSA-- 754
Query: 81 GTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVAS 117
S S +E ++ ++ E + K Y G S
Sbjct: 755 SPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVS 791
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 15 SHSKKS--HRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGNDSTRTEEVQDDNW 72
S +KS HR R RE+ + + K+ RGS+ + +G ++ T TE + D
Sbjct: 355 SRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKS-SVKSGSREKQSEDTNTESKESD-- 411
Query: 73 GETTTAITGTSEHSISQED 91
T + GTSE S+ D
Sbjct: 412 --TKNEVNGTSEDIKSEGD 428
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 15 SHSKKS--HRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGNDSTRTEEVQDDNW 72
S +KS HR R RE+ + + K+ RGS+ + +G ++ T TE + D
Sbjct: 355 SRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKS-SVKSGSREKQSEDTNTESKESD-- 411
Query: 73 GETTTAITGTSEHSISQED 91
T + GTSE S+ D
Sbjct: 412 --TKNEVNGTSEDIKSEGD 428
>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 1 [Homo
sapiens]
Length = 1834
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 317 PSNNATGQSRAMIAAAARRRDSSHNELY-------YEEAEHERRVKKRK 358
PS N G A +AAA RR+ H Y EE E +RR ++RK
Sbjct: 1391 PSANQIGLPSAQVAAAERRKREEHQRWYEKEKARLEEERERKRREQERK 1439
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 317 PSNNATGQSRAMIAAAARRRDSSHNELY-------YEEAEHERRVKKRK 358
PS N G A +AAA RR+ H Y EE E +RR ++RK
Sbjct: 1392 PSANQIGLPSAQVAAAERRKREEHQRWYEKEKARLEEERERKRREQERK 1440
>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 3 [Homo
sapiens]
Length = 1612
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 317 PSNNATGQSRAMIAAAARRRDSSHNELY-------YEEAEHERRVKKRK 358
PS N G A +AAA RR+ H Y EE E +RR ++RK
Sbjct: 1376 PSANQIGLPSAQVAAAERRKREEHQRWYEKEKARLEEERERKRREQERK 1424
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 331 AAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQ--------- 381
A + EL+ EE + R+ ++RK R EE HI+R Q EEQ+
Sbjct: 1852 ATQEKSRREEQELWQEEEQKRRQERERKLR-----EE---HIRRQQKEEQRHRQVGEIKS 1903
Query: 382 ---KAPGEVMDPREAAQAIFPSMARALQKYLRITRQQ 415
K G +++P A P + L +Y++ R Q
Sbjct: 1904 QEGKGHGRLLEPGTHQFASVPVRSSPLYEYIQEQRSQ 1940
>gi|151101449 solute carrier family 4, sodium bicarbonate
cotransporter, member 9 [Homo sapiens]
Length = 959
Score = 32.0 bits (71), Expect = 1.4
Identities = 28/124 (22%), Positives = 50/124 (40%)
Query: 72 WGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLGLLVFLTPIAFI 131
W + T I+ S+ +E A + + +G+ +R GL V G +FL P+
Sbjct: 751 WYVSATVISLAHMDSLRRESRACAPGERPNFLGIREQRLTGLVVFILTGASIFLAPVLKF 810
Query: 132 LLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMPRVFVFRALLLV 191
+ P+L+ L + + KLL++ R + RV +F A+ L
Sbjct: 811 IPMPVLYGIFLYMGVAALSSIQFTNRVKLLLMPAKHQPDLLLLRHVPLTRVHLFTAIQLA 870
Query: 192 LIFL 195
+ L
Sbjct: 871 CLGL 874
>gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens]
Length = 4523
Score = 32.0 bits (71), Expect = 1.4
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 278 VVLENYYKDFTIYNPNLLTASKFRAAKHMAGL-------KVYNVDGPSNNATGQSRAMIA 330
VV E+Y KD +NPNL+ F AA A + +VY P A Q+ +A
Sbjct: 3277 VVNEHYLKD-PEFNPNLIRTKSFAAAGLCAWVINIIKFYEVYCDVEPKRQALAQANLELA 3335
Query: 331 AAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQ 381
AA + ++ +L + + +RL + E+A R Q E Q
Sbjct: 3336 AATEKLEAIRKKLV--------DLDRNLSRLTASFEKATAEKVRCQEEVNQ 3378
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 31.6 bits (70), Expect = 1.9
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 35 RNKDGRGSEKSVTIQPPTGEPLLGNDSTRTEEVQDDNWGETTTAITGTSEH-SISQEDIA 93
R GRG + V P +G G DS+ V D TT IT TS + S S +
Sbjct: 369 RGSPGRGQKTKVCTTPSSGHAASGKDSSSRLAVTDPTRPGATTKITTTSTYISASTLKVN 428
Query: 94 RISKDMEDSV 103
+ +K + D +
Sbjct: 429 KKTKGLIDGL 438
>gi|197927160 solute carrier family 4, sodium bicarbonate
cotransporter, member 4 isoform 3 [Homo sapiens]
Length = 1094
Score = 31.2 bits (69), Expect = 2.4
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 72 WGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLGLLVFLTPIAFI 131
W T I+ S+ E + +G+ +R G V GL VF+ PI
Sbjct: 840 WYVAATVISIAHIDSLKMETETSAPGEQPKFLGVREQRVTGTLVFILTGLSVFMAPILKF 899
Query: 132 LLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMPRVFVFRAL-LL 190
+ P+L+ L G+ KLL++ + F R + RV +F L +L
Sbjct: 900 IPMPVLYGVFLYMGVASLNGVQFMDRLKLLLMPLKHQPDFIYLRHVPLRRVHLFTFLQVL 959
Query: 191 VLIFLFVV 198
L L+++
Sbjct: 960 CLALLWIL 967
>gi|4507025 solute carrier family 4, sodium bicarbonate
cotransporter, member 4 isoform 2 [Homo sapiens]
Length = 1035
Score = 31.2 bits (69), Expect = 2.4
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 72 WGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLGLLVFLTPIAFI 131
W T I+ S+ E + +G+ +R G V GL VF+ PI
Sbjct: 796 WYVAATVISIAHIDSLKMETETSAPGEQPKFLGVREQRVTGTLVFILTGLSVFMAPILKF 855
Query: 132 LLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMPRVFVFRAL-LL 190
+ P+L+ L G+ KLL++ + F R + RV +F L +L
Sbjct: 856 IPMPVLYGVFLYMGVASLNGVQFMDRLKLLLMPLKHQPDFIYLRHVPLRRVHLFTFLQVL 915
Query: 191 VLIFLFVV 198
L L+++
Sbjct: 916 CLALLWIL 923
>gi|148596928 solute carrier family 4, sodium bicarbonate
cotransporter, member 4 isoform 1 [Homo sapiens]
Length = 1079
Score = 31.2 bits (69), Expect = 2.4
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 72 WGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLGLLVFLTPIAFI 131
W T I+ S+ E + +G+ +R G V GL VF+ PI
Sbjct: 840 WYVAATVISIAHIDSLKMETETSAPGEQPKFLGVREQRVTGTLVFILTGLSVFMAPILKF 899
Query: 132 LLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMPRVFVFRAL-LL 190
+ P+L+ L G+ KLL++ + F R + RV +F L +L
Sbjct: 900 IPMPVLYGVFLYMGVASLNGVQFMDRLKLLLMPLKHQPDFIYLRHVPLRRVHLFTFLQVL 959
Query: 191 VLIFLFVV 198
L L+++
Sbjct: 960 CLALLWIL 967
>gi|4502399 filensin isoform 1 [Homo sapiens]
Length = 665
Score = 30.8 bits (68), Expect = 3.2
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Query: 333 ARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPRE 392
A+R Y E E + +K+ RL +EA +H RLQ E Q + D
Sbjct: 116 AQRALDEFRSKYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQ-----FLQDDIS 170
Query: 393 AAQAIFPSMARALQKYLRITRQQNYHSMESILQHLAFCITNGMTPKAFLERYLSAGPTLQ 452
AA+ +Q Y+ I QQ H+ A +T+GM + L A Q
Sbjct: 171 AAKDRHKKNLLEVQTYISIL-QQIIHTTPP-----ASIVTSGMREEKLLTEREVAALRSQ 224
Query: 453 YDKDRWLST--QWRLVSDEAVTNGLRDGIVFVLKCLD 487
++ R + + Q + V +A T L I +C D
Sbjct: 225 LEEGREVLSHLQAQRVELQAQTTTLEQAIKSAHECYD 261
>gi|239787151 filensin isoform 2 [Homo sapiens]
Length = 540
Score = 30.8 bits (68), Expect = 3.2
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 13/147 (8%)
Query: 343 LYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMA 402
+Y E E + +K+ RL +EA +H RLQ E Q + D AA+
Sbjct: 1 MYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQ-----FLQDDISAAKDRHKKNL 55
Query: 403 RALQKYLRITRQQNYHSMESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRWLST- 461
+Q Y+ I QQ H+ A +T+GM + L A Q ++ R + +
Sbjct: 56 LEVQTYISIL-QQIIHTTPP-----ASIVTSGMREEKLLTEREVAALRSQLEEGREVLSH 109
Query: 462 -QWRLVSDEAVTNGLRDGIVFVLKCLD 487
Q + V +A T L I +C D
Sbjct: 110 LQAQRVELQAQTTTLEQAIKSAHECYD 136
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEE--QQ 381
++RA+I R +D++ L EEAE ++V + ARL VA +EA +++L E+ QQ
Sbjct: 2250 ENRALIL---RDKDNTQRFLQ-EEAEKMKQVAEEAARLSVAAQEA-ARLRQLAEEDLAQQ 2304
Query: 382 KAPGEVMDPREAAQAI-----FPSMARALQKYLRITRQQ 415
+A E M +E QA+ + A LQ+ + ++Q
Sbjct: 2305 RALAEKM-LKEKMQAVQEATRLKAEAELLQQQKELAQEQ 2342
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKA------RLVVAVEEAFIHIQRLQA 377
+ R + A RRR + + A E ++RKA RL VEEA +RL+
Sbjct: 1971 RQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA----RRLRE 2026
Query: 378 EEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQ 425
+Q++ ++ +EAAQ +A +K QQ ++ LQ
Sbjct: 2027 RAEQESARQLQLAQEAAQ----KRLQAEEKAHAFAVQQKEQELQQTLQ 2070
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEE--QQ 381
++RA+I R +D++ L EEAE ++V + ARL VA +EA +++L E+ QQ
Sbjct: 2254 ENRALIL---RDKDNTQRFLQ-EEAEKMKQVAEEAARLSVAAQEA-ARLRQLAEEDLAQQ 2308
Query: 382 KAPGEVMDPREAAQAI-----FPSMARALQKYLRITRQQ 415
+A E M +E QA+ + A LQ+ + ++Q
Sbjct: 2309 RALAEKM-LKEKMQAVQEATRLKAEAELLQQQKELAQEQ 2346
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKA------RLVVAVEEAFIHIQRLQA 377
+ R + A RRR + + A E ++RKA RL VEEA +RL+
Sbjct: 1975 RQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA----RRLRE 2030
Query: 378 EEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQ 425
+Q++ ++ +EAAQ +A +K QQ ++ LQ
Sbjct: 2031 RAEQESARQLQLAQEAAQ----KRLQAEEKAHAFAVQQKEQELQQTLQ 2074
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEE--QQ 381
++RA+I R +D++ L EEAE ++V + ARL VA +EA +++L E+ QQ
Sbjct: 2250 ENRALIL---RDKDNTQRFLQ-EEAEKMKQVAEEAARLSVAAQEA-ARLRQLAEEDLAQQ 2304
Query: 382 KAPGEVMDPREAAQAI-----FPSMARALQKYLRITRQQ 415
+A E M +E QA+ + A LQ+ + ++Q
Sbjct: 2305 RALAEKM-LKEKMQAVQEATRLKAEAELLQQQKELAQEQ 2342
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKA------RLVVAVEEAFIHIQRLQA 377
+ R + A RRR + + A E ++RKA RL VEEA +RL+
Sbjct: 1971 RQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA----RRLRE 2026
Query: 378 EEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQ 425
+Q++ ++ +EAAQ +A +K QQ ++ LQ
Sbjct: 2027 RAEQESARQLQLAQEAAQ----KRLQAEEKAHAFAVQQKEQELQQTLQ 2070
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEE--QQ 381
++RA+I R +D++ L EEAE ++V + ARL VA +EA +++L E+ QQ
Sbjct: 2218 ENRALIL---RDKDNTQRFLQ-EEAEKMKQVAEEAARLSVAAQEA-ARLRQLAEEDLAQQ 2272
Query: 382 KAPGEVMDPREAAQAI-----FPSMARALQKYLRITRQQ 415
+A E M +E QA+ + A LQ+ + ++Q
Sbjct: 2273 RALAEKM-LKEKMQAVQEATRLKAEAELLQQQKELAQEQ 2310
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKA------RLVVAVEEAFIHIQRLQA 377
+ R + A RRR + + A E ++RKA RL VEEA +RL+
Sbjct: 1939 RQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA----RRLRE 1994
Query: 378 EEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQ 425
+Q++ ++ +EAAQ +A +K QQ ++ LQ
Sbjct: 1995 RAEQESARQLQLAQEAAQ----KRLQAEEKAHAFAVQQKEQELQQTLQ 2038
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEE--QQ 381
++RA+I R +D++ L EEAE ++V + ARL VA +EA +++L E+ QQ
Sbjct: 2387 ENRALIL---RDKDNTQRFLQ-EEAEKMKQVAEEAARLSVAAQEA-ARLRQLAEEDLAQQ 2441
Query: 382 KAPGEVMDPREAAQAI-----FPSMARALQKYLRITRQQ 415
+A E M +E QA+ + A LQ+ + ++Q
Sbjct: 2442 RALAEKM-LKEKMQAVQEATRLKAEAELLQQQKELAQEQ 2479
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKA------RLVVAVEEAFIHIQRLQA 377
+ R + A RRR + + A E ++RKA RL VEEA +RL+
Sbjct: 2108 RQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA----RRLRE 2163
Query: 378 EEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQ 425
+Q++ ++ +EAAQ +A +K QQ ++ LQ
Sbjct: 2164 RAEQESARQLQLAQEAAQ----KRLQAEEKAHAFAVQQKEQELQQTLQ 2207
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEE--QQ 381
++RA+I R +D++ L EEAE ++V + ARL VA +EA +++L E+ QQ
Sbjct: 2228 ENRALIL---RDKDNTQRFLQ-EEAEKMKQVAEEAARLSVAAQEA-ARLRQLAEEDLAQQ 2282
Query: 382 KAPGEVMDPREAAQAI-----FPSMARALQKYLRITRQQ 415
+A E M +E QA+ + A LQ+ + ++Q
Sbjct: 2283 RALAEKM-LKEKMQAVQEATRLKAEAELLQQQKELAQEQ 2320
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKA------RLVVAVEEAFIHIQRLQA 377
+ R + A RRR + + A E ++RKA RL VEEA +RL+
Sbjct: 1949 RQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA----RRLRE 2004
Query: 378 EEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQ 425
+Q++ ++ +EAAQ +A +K QQ ++ LQ
Sbjct: 2005 RAEQESARQLQLAQEAAQ----KRLQAEEKAHAFAVQQKEQELQQTLQ 2048
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEE--QQ 381
++RA+I R +D++ L EEAE ++V + ARL VA +EA +++L E+ QQ
Sbjct: 2236 ENRALIL---RDKDNTQRFLQ-EEAEKMKQVAEEAARLSVAAQEA-ARLRQLAEEDLAQQ 2290
Query: 382 KAPGEVMDPREAAQAI-----FPSMARALQKYLRITRQQ 415
+A E M +E QA+ + A LQ+ + ++Q
Sbjct: 2291 RALAEKM-LKEKMQAVQEATRLKAEAELLQQQKELAQEQ 2328
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKA------RLVVAVEEAFIHIQRLQA 377
+ R + A RRR + + A E ++RKA RL VEEA +RL+
Sbjct: 1957 RQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA----RRLRE 2012
Query: 378 EEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQ 425
+Q++ ++ +EAAQ +A +K QQ ++ LQ
Sbjct: 2013 RAEQESARQLQLAQEAAQ----KRLQAEEKAHAFAVQQKEQELQQTLQ 2056
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEE--QQ 381
++RA+I R +D++ L EEAE ++V + ARL VA +EA +++L E+ QQ
Sbjct: 2277 ENRALIL---RDKDNTQRFLQ-EEAEKMKQVAEEAARLSVAAQEA-ARLRQLAEEDLAQQ 2331
Query: 382 KAPGEVMDPREAAQAI-----FPSMARALQKYLRITRQQ 415
+A E M +E QA+ + A LQ+ + ++Q
Sbjct: 2332 RALAEKM-LKEKMQAVQEATRLKAEAELLQQQKELAQEQ 2369
Score = 30.4 bits (67), Expect = 4.1
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 324 QSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKA------RLVVAVEEAFIHIQRLQA 377
+ R + A RRR + + A E ++RKA RL VEEA +RL+
Sbjct: 1998 RQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA----RRLRE 2053
Query: 378 EEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQ 425
+Q++ ++ +EAAQ +A +K QQ ++ LQ
Sbjct: 2054 RAEQESARQLQLAQEAAQ----KRLQAEEKAHAFAVQQKEQELQQTLQ 2097
>gi|26190614 rhotekin 2 [Homo sapiens]
Length = 609
Score = 30.8 bits (68), Expect = 3.2
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 38 DGRGSEKSVTIQPPTGEPLLGNDSTRTEEVQDDNWGETTTAITGTSEHSIS 88
D +G ++ + P P + T+++ DNWG+T+ + T + + +S
Sbjct: 496 DEKGKKRQAPLPPSDKLPFSLKSQSNTDQLVKDNWGKTSVSQTSSLDTKLS 546
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,350,312
Number of Sequences: 37866
Number of extensions: 759997
Number of successful extensions: 2828
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 2755
Number of HSP's gapped (non-prelim): 95
length of query: 524
length of database: 18,247,518
effective HSP length: 107
effective length of query: 417
effective length of database: 14,195,856
effective search space: 5919671952
effective search space used: 5919671952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.