Search of human proteins with 20336752

Search of human proteins with 20336752

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20336752 histone cluster 1, H2bd [Homo sapiens]
         (126 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|10800138 histone cluster 1, H2bd [Homo sapiens]                    246   3e-66
gi|20336752 histone cluster 1, H2bd [Homo sapiens]                    246   3e-66
gi|4504261 histone cluster 1, H2bn [Homo sapiens]                     245   7e-66
gi|21396484 histone cluster 1, H2be [Homo sapiens]                    244   1e-65
gi|4504265 histone cluster 1, H2bf [Homo sapiens]                     244   1e-65
gi|4504257 histone cluster 1, H2bg [Homo sapiens]                     244   1e-65
gi|21166389 histone cluster 1, H2bc [Homo sapiens]                    244   1e-65
gi|4504271 histone cluster 1, H2bi [Homo sapiens]                     244   1e-65
gi|4504277 histone cluster 2, H2be [Homo sapiens]                     244   1e-65
gi|10800140 histone cluster 1, H2bb [Homo sapiens]                    244   1e-65
gi|18105048 histone cluster 1, H2bk [Homo sapiens]                    243   2e-65
gi|4504269 histone cluster 1, H2bh [Homo sapiens]                     243   2e-65
gi|20336754 histone cluster 1, H2bj [Homo sapiens]                    243   3e-65
gi|16306566 histone cluster 1, H2bo [Homo sapiens]                    243   3e-65
gi|238624110 histone cluster 2, H2bf isoform b [Homo sapiens]         242   6e-65
gi|66912162 histone cluster 2, H2bf isoform a [Homo sapiens]          242   6e-65
gi|4504263 histone cluster 1, H2bm [Homo sapiens]                     241   1e-64
gi|28173554 histone cluster 3, H2bb [Homo sapiens]                    239   4e-64
gi|4504259 histone cluster 1, H2bl [Homo sapiens]                     238   7e-64
gi|24586679 histone cluster 1, H2ba [Homo sapiens]                    208   1e-54
gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]    99   1e-21
gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]    99   1e-21
gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]    99   1e-21
gi|50897288 H2B histone family, member W, testis-specific [Homo ...    94   3e-20
gi|169217181 PREDICTED: similar to RAB40A, member RAS oncogene f...    39   0.001
gi|169216368 PREDICTED: similar to RAB40A, member RAS oncogene f...    39   0.001
gi|169216631 PREDICTED: similar to RAB40A, member RAS oncogene f...    39   0.001
gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]    34   0.026
gi|166706917 hypothetical protein LOC199920 [Homo sapiens]             30   0.64 
gi|76781480 vascular endothelial growth factor A isoform a precu...    29   0.83 

>gi|10800138 histone cluster 1, H2bd [Homo sapiens]
          Length = 126

 Score =  246 bits (629), Expect = 3e-66
 Identities = 126/126 (100%), Positives = 126/126 (100%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|20336752 histone cluster 1, H2bd [Homo sapiens]
          Length = 126

 Score =  246 bits (629), Expect = 3e-66
 Identities = 126/126 (100%), Positives = 126/126 (100%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504261 histone cluster 1, H2bn [Homo sapiens]
          Length = 126

 Score =  245 bits (625), Expect = 7e-66
 Identities = 125/126 (99%), Positives = 126/126 (100%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP+KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPSKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|21396484 histone cluster 1, H2be [Homo sapiens]
          Length = 126

 Score =  244 bits (624), Expect = 1e-65
 Identities = 125/126 (99%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504265 histone cluster 1, H2bf [Homo sapiens]
          Length = 126

 Score =  244 bits (624), Expect = 1e-65
 Identities = 125/126 (99%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504257 histone cluster 1, H2bg [Homo sapiens]
          Length = 126

 Score =  244 bits (624), Expect = 1e-65
 Identities = 125/126 (99%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|21166389 histone cluster 1, H2bc [Homo sapiens]
          Length = 126

 Score =  244 bits (624), Expect = 1e-65
 Identities = 125/126 (99%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504271 histone cluster 1, H2bi [Homo sapiens]
          Length = 126

 Score =  244 bits (624), Expect = 1e-65
 Identities = 125/126 (99%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504277 histone cluster 2, H2be [Homo sapiens]
          Length = 126

 Score =  244 bits (623), Expect = 1e-65
 Identities = 124/126 (98%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|10800140 histone cluster 1, H2bb [Homo sapiens]
          Length = 126

 Score =  244 bits (623), Expect = 1e-65
 Identities = 123/126 (97%), Positives = 126/126 (100%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP+KSAPAPKKGSKKA+TKAQKKDGKKRKRSRKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPSKSAPAPKKGSKKAITKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|18105048 histone cluster 1, H2bk [Homo sapiens]
          Length = 126

 Score =  243 bits (621), Expect = 2e-65
 Identities = 124/126 (98%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTS+K
Sbjct: 121 KYTSAK 126


>gi|4504269 histone cluster 1, H2bh [Homo sapiens]
          Length = 126

 Score =  243 bits (621), Expect = 2e-65
 Identities = 124/126 (98%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|20336754 histone cluster 1, H2bj [Homo sapiens]
          Length = 126

 Score =  243 bits (620), Expect = 3e-65
 Identities = 123/126 (97%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTS+K
Sbjct: 121 KYTSAK 126


>gi|16306566 histone cluster 1, H2bo [Homo sapiens]
          Length = 126

 Score =  243 bits (620), Expect = 3e-65
 Identities = 123/126 (97%), Positives = 125/126 (99%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|238624110 histone cluster 2, H2bf isoform b [Homo sapiens]
          Length = 134

 Score =  242 bits (617), Expect = 6e-65
 Identities = 123/126 (97%), Positives = 124/126 (98%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAPAPKKGSKKAVTK QKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|66912162 histone cluster 2, H2bf isoform a [Homo sapiens]
          Length = 126

 Score =  242 bits (617), Expect = 6e-65
 Identities = 123/126 (97%), Positives = 124/126 (98%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P KSAPAPKKGSKKAVTK QKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504263 histone cluster 1, H2bm [Homo sapiens]
          Length = 126

 Score =  241 bits (614), Expect = 1e-64
 Identities = 122/126 (96%), Positives = 123/126 (97%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPEP KSAP PKKGSKKA+ KAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|28173554 histone cluster 3, H2bb [Homo sapiens]
          Length = 126

 Score =  239 bits (610), Expect = 4e-64
 Identities = 120/126 (95%), Positives = 124/126 (98%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MP+P+KSAPAPKKGSKKAVTKAQKKDGKKRKR RKESYS+YVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIA EASRLAHYNKRSTITSRE+QTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|4504259 histone cluster 1, H2bl [Homo sapiens]
          Length = 126

 Score =  238 bits (608), Expect = 7e-64
 Identities = 123/126 (97%), Positives = 123/126 (97%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60
           MPE  KSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
Sbjct: 1   MPELAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM 60

Query: 61  GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120
           GIMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
Sbjct: 61  GIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT 120

Query: 121 KYTSSK 126
           KYTSSK
Sbjct: 121 KYTSSK 126


>gi|24586679 histone cluster 1, H2ba [Homo sapiens]
          Length = 127

 Score =  208 bits (529), Expect = 1e-54
 Identities = 108/127 (85%), Positives = 115/127 (90%), Gaps = 1/127 (0%)

Query: 1   MPE-PTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKA 59
           MPE  +K A   KKG KKAV K QKK+GKKRKR+RKESYS+Y+YKVLKQVHPDTGISSKA
Sbjct: 1   MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA 60

Query: 60  MGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAV 119
           M IMNSFV DIFERIA EASRLAHY+KRSTI+SREIQTAVRLLLPGELAKHAVSEGTKAV
Sbjct: 61  MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV 120

Query: 120 TKYTSSK 126
           TKYTSSK
Sbjct: 121 TKYTSSK 127


>gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 248

 Score = 98.6 bits (244), Expect = 1e-21
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 2   PEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMG 61
           P+   S  A K+  ++    ++++   +R  S  +S++ Y  +VLKQVH    +S +A+ 
Sbjct: 119 PKEANSTKAQKQ-KRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHXGLSLSQEAVS 177

Query: 62  IMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121
           +M+S ++DI +RIA EA +LAHY KR TITSR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 178 VMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 237


>gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 98.6 bits (244), Expect = 1e-21
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 2   PEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMG 61
           P+   S  A K+  ++    ++++   +R  S  +S++ Y  +VLKQVH    +S +A+ 
Sbjct: 128 PKEANSTKAQKQ-KRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVS 186

Query: 62  IMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121
           +M+S ++DI +RIA EA +LAHY KR TITSR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 187 VMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246


>gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 98.6 bits (244), Expect = 1e-21
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 2   PEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMG 61
           P+   S  A K+  ++    ++++   +R  S  +S++ Y  +VLKQVH    +S +A+ 
Sbjct: 128 PKEANSTKAQKQ-KRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVS 186

Query: 62  IMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121
           +M+S ++DI +RIA EA +LAHY KR TITSR+IQ AVRLLLPG++ K A ++GT A  +
Sbjct: 187 VMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246


>gi|50897288 H2B histone family, member W, testis-specific [Homo
           sapiens]
          Length = 175

 Score = 94.0 bits (232), Expect = 3e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107

Query: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164


>gi|169217181 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 45 VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEA 78
          VLKQ HPD   +   +GIMN F+ DIFE I  +A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|169216368 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 45 VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEA 78
          VLKQ HPD   +   +GIMN F+ DIFE I  +A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|169216631 PREDICTED: similar to RAB40A, member RAS oncogene
          family [Homo sapiens]
          Length = 224

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 45 VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEA 78
          VLKQ HPD   +   +GIMN F+ DIFE I  +A
Sbjct: 31 VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKA 64


>gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]
          Length = 1104

 Score = 34.3 bits (77), Expect = 0.026
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 54  GISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVS 113
           G+   A+  +++ V+    RIA EA RL+   + +  T  EIQ+A+ ++L   LA H  +
Sbjct: 123 GLPKDALAKLSTLVSRALVRIAKEAQRLSL--RFAKCTKYEIQSAMEIVLSWGLAAHCTA 180

Query: 114 EGTKAVTKYTSS 125
               A++ Y  S
Sbjct: 181 AALAALSLYNMS 192


>gi|166706917 hypothetical protein LOC199920 [Homo sapiens]
          Length = 728

 Score = 29.6 bits (65), Expect = 0.64
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 1   MPEPTKSAPAPKKGSKKAVTKAQKKDG--KKRKRSRKESYSVYVYKV---------LKQV 49
           + +P K+ P P+  +K    K ++K     K K + KE YS +V+KV         ++  
Sbjct: 364 LQKPGKNFPYPEPSAKHEDKKMKEKQPCELKPKNTEKEPYSNHVFKVDACEGTPEKIQMT 423

Query: 50  HPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNK 86
           +  TG  +   G   + ++ I      E  +LA +++
Sbjct: 424 NVHTGRRNMLAGKQEAMIDIIQTNPCPEGPKLARHSQ 460


>gi|76781480 vascular endothelial growth factor A isoform a
           precursor [Homo sapiens]
          Length = 412

 Score = 29.3 bits (64), Expect = 0.83
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 4   PTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYV 42
           P K     +K S +   K QK+   KRK+SR +S+SVYV
Sbjct: 312 PKKDRARQEKKSVRGKGKGQKR---KRKKSRYKSWSVYV 347


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.123    0.328 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,202,615
Number of Sequences: 37866
Number of extensions: 146888
Number of successful extensions: 933
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 822
Number of HSP's gapped (non-prelim): 116
length of query: 126
length of database: 18,247,518
effective HSP length: 90
effective length of query: 36
effective length of database: 14,839,578
effective search space: 534224808
effective search space used: 534224808
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.