Search of human proteins with 203098650

Search of human proteins with 203098650

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|203098650 ELMO/CED-12 domain containing 3 isoform b [Homo
sapiens]
         (381 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|203098650 ELMO/CED-12 domain containing 3 isoform b [Homo sap...   767   0.0  
gi|203098539 ELMO/CED-12 domain containing 3 isoform b [Homo sap...   767   0.0  
gi|203098474 ELMO/CED-12 domain containing 3 isoform b [Homo sap...   767   0.0  
gi|21362032 ELMO/CED-12 domain containing 3 isoform a [Homo sapi...   636   0.0  
gi|24308456 ELMO/CED-12 domain containing 2 [Homo sapiens]             60   3e-09
gi|194097484 ELMO/CED-12 domain containing 1 isoform 2 [Homo sap...    52   9e-07
gi|112181294 ELMO/CED-12 domain containing 1 isoform 1 [Homo sap...    51   2e-06
gi|87298935 engulfment and cell motility 3 [Homo sapiens]              39   0.010
gi|154426331 early undifferentiated retina and lens isoform 1 [H...    32   0.73 
gi|110347463 human immunodeficiency virus type I enhancer bindin...    32   0.95 
gi|18765700 engulfment and cell motility 1 isoform 1 [Homo sapiens]    31   1.6  
gi|116517321 olfactory receptor, family 52, subfamily R, member ...    30   3.6  
gi|169173146 PREDICTED: hypothetical protein [Homo sapiens]            30   4.7  
gi|113419909 PREDICTED: hypothetical protein [Homo sapiens]            30   4.7  
gi|23592220 G protein-coupled receptor 26 [Homo sapiens]               29   8.0  

>gi|203098650 ELMO/CED-12 domain containing 3 isoform b [Homo
           sapiens]
          Length = 381

 Score =  767 bits (1981), Expect = 0.0
 Identities = 381/381 (100%), Positives = 381/381 (100%)

Query: 1   MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA 60
           MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA
Sbjct: 1   MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA 60

Query: 61  YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK 120
           YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK
Sbjct: 61  YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK 120

Query: 121 KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK 180
           KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK
Sbjct: 121 KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK 180

Query: 181 KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL 240
           KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL
Sbjct: 181 KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL 240

Query: 241 SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR 300
           SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR
Sbjct: 241 SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR 300

Query: 301 TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK 360
           TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK
Sbjct: 301 TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK 360

Query: 361 DLTFTGESDLQSHSSEGVWLI 381
           DLTFTGESDLQSHSSEGVWLI
Sbjct: 361 DLTFTGESDLQSHSSEGVWLI 381


>gi|203098539 ELMO/CED-12 domain containing 3 isoform b [Homo
           sapiens]
          Length = 381

 Score =  767 bits (1981), Expect = 0.0
 Identities = 381/381 (100%), Positives = 381/381 (100%)

Query: 1   MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA 60
           MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA
Sbjct: 1   MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA 60

Query: 61  YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK 120
           YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK
Sbjct: 61  YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK 120

Query: 121 KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK 180
           KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK
Sbjct: 121 KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK 180

Query: 181 KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL 240
           KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL
Sbjct: 181 KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL 240

Query: 241 SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR 300
           SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR
Sbjct: 241 SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR 300

Query: 301 TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK 360
           TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK
Sbjct: 301 TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK 360

Query: 361 DLTFTGESDLQSHSSEGVWLI 381
           DLTFTGESDLQSHSSEGVWLI
Sbjct: 361 DLTFTGESDLQSHSSEGVWLI 381


>gi|203098474 ELMO/CED-12 domain containing 3 isoform b [Homo
           sapiens]
          Length = 381

 Score =  767 bits (1981), Expect = 0.0
 Identities = 381/381 (100%), Positives = 381/381 (100%)

Query: 1   MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA 60
           MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA
Sbjct: 1   MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA 60

Query: 61  YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK 120
           YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK
Sbjct: 61  YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK 120

Query: 121 KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK 180
           KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK
Sbjct: 121 KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK 180

Query: 181 KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL 240
           KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL
Sbjct: 181 KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL 240

Query: 241 SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR 300
           SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR
Sbjct: 241 SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR 300

Query: 301 TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK 360
           TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK
Sbjct: 301 TQRKTISDSGFVLKELEVLAKKSPRRLLKTLELYLARVSKGQASLLGAQKCYGPEAPPFK 360

Query: 361 DLTFTGESDLQSHSSEGVWLI 381
           DLTFTGESDLQSHSSEGVWLI
Sbjct: 361 DLTFTGESDLQSHSSEGVWLI 381


>gi|21362032 ELMO/CED-12 domain containing 3 isoform a [Homo
           sapiens]
          Length = 391

 Score =  636 bits (1640), Expect = 0.0
 Identities = 314/314 (100%), Positives = 314/314 (100%)

Query: 1   MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA 60
           MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA
Sbjct: 1   MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPISELKNHGILQALTTEA 60

Query: 61  YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK 120
           YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK
Sbjct: 61  YEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQTVDLSPFK 120

Query: 121 KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK 180
           KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK
Sbjct: 121 KRIQPTIRRTGLAALRHYLFGPPKLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYK 180

Query: 181 KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL 240
           KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL
Sbjct: 181 KLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMAQEIFRL 240

Query: 241 SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR 300
           SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR
Sbjct: 241 SRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWR 300

Query: 301 TQRKTISDSGFVLK 314
           TQRKTISDSGFVLK
Sbjct: 301 TQRKTISDSGFVLK 314


>gi|24308456 ELMO/CED-12 domain containing 2 [Homo sapiens]
          Length = 293

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224
           DS +  H  +L  ++  L  +K   A     W ++GFQG +P TD RG G L L++L+Y 
Sbjct: 121 DSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY- 179

Query: 225 VMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVV 284
                    A +I   S H    + + ++ +N+T +A   L+ E L          IP +
Sbjct: 180 -FSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTM 238

Query: 285 NSFY 288
             F+
Sbjct: 239 EHFH 242


>gi|194097484 ELMO/CED-12 domain containing 1 isoform 2 [Homo
           sapiens]
          Length = 326

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 22/185 (11%)

Query: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224
           DS +P H  +L  ++K L  +    +     W ++GFQG +P TD RG G L L +L Y 
Sbjct: 128 DSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYF 187

Query: 225 VMDSKTLPMAQEIFRLSRH-----------------HIQQFPFCLMSVNITHIAIQALRE 267
                T   AQ++   S H                     + F ++ +NIT +A   L  
Sbjct: 188 AERDAT--AAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVS 245

Query: 268 ECLSRECNRQQKVIPVVNSFYAATFLHLAHVWRTQRKTISDSGFVLKELEVLAKKSPRRL 327
             L           P + S +  TF +L H +   +  I +    + E   + +K  +R+
Sbjct: 246 GALKTHFYNIAPEAPTL-SHFQQTFCYLMHEF--HKFWIEEDPMDIMEFNRVREKFRKRI 302

Query: 328 LKTLE 332
           +K L+
Sbjct: 303 IKQLQ 307


>gi|112181294 ELMO/CED-12 domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 334

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 26/191 (13%)

Query: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224
           DS +P H  +L  ++K L  +    +     W ++GFQG +P TD RG G L L +L Y 
Sbjct: 128 DSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYF 187

Query: 225 VMDSKTLPM---------------AQEIFRLSRHHIQQ--------FPFCLMSVNITHIA 261
                T                   +EI + S+   ++        + F ++ +NIT +A
Sbjct: 188 AERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVGINITDLA 247

Query: 262 IQALREECLSRECNRQQKVIPVVNSFYAATFLHLAHVWRTQRKTISDSGFVLKELEVLAK 321
              L    L           P + S +  TF +L H +   +  I +    + E   + +
Sbjct: 248 YNLLVSGALKTHFYNIAPEAPTL-SHFQQTFCYLMHEF--HKFWIEEDPMDIMEFNRVRE 304

Query: 322 KSPRRLLKTLE 332
           K  +R++K L+
Sbjct: 305 KFRKRIIKQLQ 315


>gi|87298935 engulfment and cell motility 3 [Homo sapiens]
          Length = 773

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 21/200 (10%)

Query: 150 REERDLVLTIAQCGLDSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATD 209
           +E+R+ +  + Q   + +    G  L    ++        +L    +  LGF  +NPA D
Sbjct: 359 QEQREQLQVLRQAAFEVEGESSGAGLSADRRR--------SLCAREFRKLGFSNSNPAQD 410

Query: 210 LRGA--GFLALLHLLYLVMDSKTLPMAQEIFRL---SRHHIQQFPFCLMSVNITHIAIQA 264
           L     G LAL ++LY    S+  P A   F L   SR    + PF   S+ +T +  + 
Sbjct: 411 LERVPPGLLALDNMLYF---SRNAPSAYSRFVLENSSREDKHECPFARGSIQLTVLLCEL 467

Query: 265 LR--EECLSRECNRQQKVIPVVNSF---YAATFLHLAHVWRTQRKTISDSGFVLKELEVL 319
           LR  E C     +          SF   +      L   W+  R T  D   V++ +   
Sbjct: 468 LRVGEPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDFDKVMQVVREQ 527

Query: 320 AKKSPRRLLKTLELYLARVS 339
             ++      +LEL+  +V+
Sbjct: 528 LARTLALKPTSLELFRTKVN 547


>gi|154426331 early undifferentiated retina and lens isoform 1 [Homo
           sapiens]
          Length = 297

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 13/49 (26%), Positives = 25/49 (51%)

Query: 226 MDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSREC 274
           +++K L   QE+F    H +Q+       +++ H+AI+ L + C    C
Sbjct: 233 LNAKLLQQIQEVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNCSKLPC 281


>gi|110347463 human immunodeficiency virus type I enhancer binding
           protein 2 [Homo sapiens]
          Length = 2446

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 54  QALTTEAYEWEPRVVSTEVVRAQEEWEAVDTIQPETGSQASSEQPGQLISFSEALQHFQT 113
           Q +  ++Y  +PR+V    ++  E     +  +PE   +A S++P + +   +  Q  +T
Sbjct: 867 QQVQQQSYHTQPRLVRQHNIQVPEIRVTEEPDKPEKEKEAQSKEPEKPVEEFQWPQRSET 926

Query: 114 VDLSPFKKRIQPTIRRTGLAALRH 137
           +   P +K + P  +R  LA + H
Sbjct: 927 LSQLPAEK-LPPKKKRLRLADMEH 949


>gi|18765700 engulfment and cell motility 1 isoform 1 [Homo sapiens]
          Length = 727

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 20/195 (10%)

Query: 144 KLHQRLREERDLVLTIAQCGLDSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGF-Q 202
           K+  + + +RD++  + +   D++   +        +K        +++   ++ LGF  
Sbjct: 312 KMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRK--------SMYTRDYKKLGFIN 363

Query: 203 GANPATDLRGA--GFLALLHLLYLVMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHI 260
             NPA D      G LAL ++LY     +   +   +   SR    + PF   S+ +T +
Sbjct: 364 HVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKM 423

Query: 261 AIQALR-EECLSRECNRQQKVI----PVVNSFYAATFLHLAHVWRTQRKTISDSGFVLKE 315
             + L+  E  S  CN    +          F+      L   W+  R T  D   V++ 
Sbjct: 424 LCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQ- 482

Query: 316 LEVLAKKSPRRLLKT 330
              + K+   R L T
Sbjct: 483 ---VVKEQVMRALTT 494


>gi|116517321 olfactory receptor, family 52, subfamily R, member 1
           [Homo sapiens]
          Length = 394

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 215 FLALLHLLYLVMDSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITH 259
           FLA+L +  LV+ S T P    IF    H I Q+  CL+ V   H
Sbjct: 144 FLAMLAITDLVLSSSTQPKMLAIFWFHAHEI-QYHACLIQVFFIH 187


>gi|169173146 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 40  RGIPISELKNHGILQALTTEAYEWEPRVVS 69
           R +P +  K HG+LQA+ T+A +  P V S
Sbjct: 238 REVPQAASKTHGLLQAVRTQAQDKRPAVTS 267


>gi|113419909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 40  RGIPISELKNHGILQALTTEAYEWEPRVVS 69
           R +P +  K HG+LQA+ T+A +  P V S
Sbjct: 238 REVPQAASKTHGLLQAVRTQAQDKRPAVTS 267


>gi|23592220 G protein-coupled receptor 26 [Homo sapiens]
          Length = 337

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 206 PATDLRGAGFLALLHLLYLVMDSKTLPMAQ-EIFRLSRHHIQQFPFCLMSVNITHIAIQ- 263
           P   LR A F    H L  ++    L     ++ +++R H ++     M   +  + +  
Sbjct: 163 PDERLRFAVFTGAFHALSFLLSFVVLCCTYLKVLKVARFHCKRIDVITMQTLVLLVDLHP 222

Query: 264 ALREECLSRECNRQQKVIPVVNSFYAATFL 293
           ++RE CL  +  R+Q+    +++F   TFL
Sbjct: 223 SVRERCLEEQKRRRQRATKKISTF-IGTFL 251


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,889,697
Number of Sequences: 37866
Number of extensions: 629519
Number of successful extensions: 1508
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1496
Number of HSP's gapped (non-prelim): 15
length of query: 381
length of database: 18,247,518
effective HSP length: 104
effective length of query: 277
effective length of database: 14,309,454
effective search space: 3963718758
effective search space used: 3963718758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.