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Search of human proteins with 20149633
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20149633 evolutionarily conserved signaling intermediate in
Toll pathway isoform 1 [Homo sapiens]
(431 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20149633 evolutionarily conserved signaling intermediate in T... 889 0.0
gi|215599065 evolutionarily conserved signaling intermediate in ... 547 e-156
gi|215599070 evolutionarily conserved signaling intermediate in ... 392 e-109
gi|25952134 dispatched A [Homo sapiens] 34 0.22
gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo ... 30 3.2
gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo ... 30 3.2
gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo ... 30 3.2
gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo ... 30 3.2
gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo ... 30 3.2
gi|224586844 sorbin and SH3 domain containing 2 isoform 3 [Homo ... 30 3.2
gi|239752966 PREDICTED: hypothetical protein [Homo sapiens] 30 3.2
gi|109826564 neurofibromin isoform 1 [Homo sapiens] 30 3.2
gi|4557793 neurofibromin isoform 2 [Homo sapiens] 30 3.2
gi|8922699 CNDP dipeptidase 2 [Homo sapiens] 30 3.2
gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo s... 30 3.2
gi|194733749 sorbin and SH3 domain containing 2 isoform 1 [Homo ... 30 3.2
gi|169171308 PREDICTED: hypothetical protein [Homo sapiens] 30 5.5
gi|89025853 PREDICTED: hypothetical protein [Homo sapiens] 30 5.5
gi|42657886 PREDICTED: hypothetical protein [Homo sapiens] 30 5.5
gi|42658266 PREDICTED: hypothetical protein [Homo sapiens] 30 5.5
gi|156938257 leucine rich repeat containing 16B [Homo sapiens] 29 7.2
gi|24308227 zinc finger protein 687 [Homo sapiens] 29 7.2
gi|108773787 retinoblastoma 1 [Homo sapiens] 29 9.4
gi|157671951 solute carrier family 4, anion exchanger, member 3 ... 29 9.4
gi|157671953 solute carrier family 4, anion exchanger, member 3 ... 29 9.4
gi|22749483 hypothetical protein LOC253868 [Homo sapiens] 29 9.4
>gi|20149633 evolutionarily conserved signaling intermediate in Toll
pathway isoform 1 [Homo sapiens]
Length = 431
Score = 889 bits (2297), Expect = 0.0
Identities = 431/431 (100%), Positives = 431/431 (100%)
Query: 1 MSWVQATLLARGLCRAWGGTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPE 60
MSWVQATLLARGLCRAWGGTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPE
Sbjct: 1 MSWVQATLLARGLCRAWGGTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPE 60
Query: 61 PRQRPTKALVPFEDLFGQAPGGERDKASFLQTVQKFAEHSVRKRGHIDFIYLALRKMREY 120
PRQRPTKALVPFEDLFGQAPGGERDKASFLQTVQKFAEHSVRKRGHIDFIYLALRKMREY
Sbjct: 61 PRQRPTKALVPFEDLFGQAPGGERDKASFLQTVQKFAEHSVRKRGHIDFIYLALRKMREY 120
Query: 121 GVERDLAVYNQLLNIFPKEVFRPRNIIQRIFVHYPRQQECGIAVLEQMENHGVMPNKETE 180
GVERDLAVYNQLLNIFPKEVFRPRNIIQRIFVHYPRQQECGIAVLEQMENHGVMPNKETE
Sbjct: 121 GVERDLAVYNQLLNIFPKEVFRPRNIIQRIFVHYPRQQECGIAVLEQMENHGVMPNKETE 180
Query: 181 FLLIQIFGRKSYPMLKLVRLKLWFPRFMNVNPFPVPRDLPQDPVELAMFGLRHMEPDLSA 240
FLLIQIFGRKSYPMLKLVRLKLWFPRFMNVNPFPVPRDLPQDPVELAMFGLRHMEPDLSA
Sbjct: 181 FLLIQIFGRKSYPMLKLVRLKLWFPRFMNVNPFPVPRDLPQDPVELAMFGLRHMEPDLSA 240
Query: 241 RVTIYQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVFVEGPFSLWLRNKCV 300
RVTIYQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVFVEGPFSLWLRNKCV
Sbjct: 241 RVTIYQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVFVEGPFSLWLRNKCV 300
Query: 301 YYHILRADLLPPEEREVEETPEEWNLYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMC 360
YYHILRADLLPPEEREVEETPEEWNLYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMC
Sbjct: 301 YYHILRADLLPPEEREVEETPEEWNLYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMC 360
Query: 361 MAGAHDQATMAKWIQGLQETNPTLAQIPVVFRLAGSTRELQTSSAGLEEPPLPEDHQEED 420
MAGAHDQATMAKWIQGLQETNPTLAQIPVVFRLAGSTRELQTSSAGLEEPPLPEDHQEED
Sbjct: 361 MAGAHDQATMAKWIQGLQETNPTLAQIPVVFRLAGSTRELQTSSAGLEEPPLPEDHQEED 420
Query: 421 DNLQRQQQGQS 431
DNLQRQQQGQS
Sbjct: 421 DNLQRQQQGQS 431
>gi|215599065 evolutionarily conserved signaling intermediate in
Toll pathway isoform 2 [Homo sapiens]
Length = 296
Score = 547 bits (1409), Expect = e-156
Identities = 266/266 (100%), Positives = 266/266 (100%)
Query: 1 MSWVQATLLARGLCRAWGGTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPE 60
MSWVQATLLARGLCRAWGGTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPE
Sbjct: 1 MSWVQATLLARGLCRAWGGTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPE 60
Query: 61 PRQRPTKALVPFEDLFGQAPGGERDKASFLQTVQKFAEHSVRKRGHIDFIYLALRKMREY 120
PRQRPTKALVPFEDLFGQAPGGERDKASFLQTVQKFAEHSVRKRGHIDFIYLALRKMREY
Sbjct: 61 PRQRPTKALVPFEDLFGQAPGGERDKASFLQTVQKFAEHSVRKRGHIDFIYLALRKMREY 120
Query: 121 GVERDLAVYNQLLNIFPKEVFRPRNIIQRIFVHYPRQQECGIAVLEQMENHGVMPNKETE 180
GVERDLAVYNQLLNIFPKEVFRPRNIIQRIFVHYPRQQECGIAVLEQMENHGVMPNKETE
Sbjct: 121 GVERDLAVYNQLLNIFPKEVFRPRNIIQRIFVHYPRQQECGIAVLEQMENHGVMPNKETE 180
Query: 181 FLLIQIFGRKSYPMLKLVRLKLWFPRFMNVNPFPVPRDLPQDPVELAMFGLRHMEPDLSA 240
FLLIQIFGRKSYPMLKLVRLKLWFPRFMNVNPFPVPRDLPQDPVELAMFGLRHMEPDLSA
Sbjct: 181 FLLIQIFGRKSYPMLKLVRLKLWFPRFMNVNPFPVPRDLPQDPVELAMFGLRHMEPDLSA 240
Query: 241 RVTIYQVPLPKDSTGAADPPQPHIVG 266
RVTIYQVPLPKDSTGAADPPQPHIVG
Sbjct: 241 RVTIYQVPLPKDSTGAADPPQPHIVG 266
>gi|215599070 evolutionarily conserved signaling intermediate in
Toll pathway isoform 3 [Homo sapiens]
Length = 217
Score = 392 bits (1006), Expect = e-109
Identities = 187/189 (98%), Positives = 188/189 (99%)
Query: 243 TIYQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVFVEGPFSLWLRNKCVYY 302
+I QVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVFVEGPFSLWLRNKCVYY
Sbjct: 29 SISQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVFVEGPFSLWLRNKCVYY 88
Query: 303 HILRADLLPPEEREVEETPEEWNLYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMCMA 362
HILRADLLPPEEREVEETPEEWNLYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMCMA
Sbjct: 89 HILRADLLPPEEREVEETPEEWNLYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMCMA 148
Query: 363 GAHDQATMAKWIQGLQETNPTLAQIPVVFRLAGSTRELQTSSAGLEEPPLPEDHQEEDDN 422
GAHDQATMAKWIQGLQETNPTLAQIPVVFRLAGSTRELQTSSAGLEEPPLPEDHQEEDDN
Sbjct: 149 GAHDQATMAKWIQGLQETNPTLAQIPVVFRLAGSTRELQTSSAGLEEPPLPEDHQEEDDN 208
Query: 423 LQRQQQGQS 431
LQRQQQGQS
Sbjct: 209 LQRQQQGQS 217
Score = 75.1 bits (183), Expect = 1e-13
Identities = 43/80 (53%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 1 MSWVQATLLARGLCRAWGGTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPE 60
MSWVQATLLARGLCRAWGGTCGAALTGTSISQVP LP+ + AA + +V
Sbjct: 1 MSWVQATLLARGLCRAWGGTCGAALTGTSISQVP--LPK--DSTGAADPPQPHIVGIQSP 56
Query: 61 PRQRPTKALVPFEDLFGQAP 80
+Q P +F + P
Sbjct: 57 DQQAALARHNPARPVFVEGP 76
>gi|25952134 dispatched A [Homo sapiens]
Length = 1524
Score = 34.3 bits (77), Expect = 0.22
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 17/71 (23%)
Query: 1 MSWVQATLLARGLCRAWG--GTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSP 58
+SW AT + +CR G GTCG Q+P LP+ L CSA +H +L SP
Sbjct: 1118 ISWAFATFFFQCMCRCLGPQGTCG---------QIP--LPKKLQCSAFSH----ALSTSP 1162
Query: 59 PEPRQRPTKAL 69
+ Q T +
Sbjct: 1163 SDKGQSKTHTI 1173
>gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo
sapiens]
Length = 492
Score = 30.4 bits (67), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 YQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVF 286
Y + K++ GA D P P I S D+ +L+ + P RPVF
Sbjct: 385 YVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVF 426
>gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo
sapiens]
Length = 1004
Score = 30.4 bits (67), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 YQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVF 286
Y + K++ GA D P P I S D+ +L+ + P RPVF
Sbjct: 897 YVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVF 938
>gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo
sapiens]
Length = 824
Score = 30.4 bits (67), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 YQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVF 286
Y + K++ GA D P P I S D+ +L+ + P RPVF
Sbjct: 717 YVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVF 758
>gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo
sapiens]
Length = 661
Score = 30.4 bits (67), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 YQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVF 286
Y + K++ GA D P P I S D+ +L+ + P RPVF
Sbjct: 554 YVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVF 595
>gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo
sapiens]
Length = 731
Score = 30.4 bits (67), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 YQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVF 286
Y + K++ GA D P P I S D+ +L+ + P RPVF
Sbjct: 624 YVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVF 665
>gi|224586844 sorbin and SH3 domain containing 2 isoform 3 [Homo
sapiens]
Length = 644
Score = 30.4 bits (67), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 YQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVF 286
Y + K++ GA D P P I S D+ +L+ + P RPVF
Sbjct: 537 YVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVF 578
>gi|239752966 PREDICTED: hypothetical protein [Homo sapiens]
Length = 117
Score = 30.4 bits (67), Expect = 3.2
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 11 RGLCRAWGGTCGAALTGTSISQVPRR--------LPRGLHCSAAAHSSEQSLVPSPPEPR 62
R CR W T G + G+S V + LPRG C + + +P PE
Sbjct: 5 RWFCRRWNCTPGESCPGSSPLSVGEKVLHSCGGSLPRGPSCKSKRDRRQLPSLPLCPEGE 64
Query: 63 Q--RPTKALVPFEDLFGQAPGGE 83
+ P AL G+ GGE
Sbjct: 65 KGSPPPPALCSSPKASGEGVGGE 87
>gi|109826564 neurofibromin isoform 1 [Homo sapiens]
Length = 2839
Score = 30.4 bits (67), Expect = 3.2
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 72 FEDLFGQAPGGERDKASFLQTVQKFAEHSVRKRGHIDFIYLALRKMREYGVERDLAVYNQ 131
FE+ + E+++ L+T+ F + K G+ F Y+A R+ + + DL +Y+
Sbjct: 1569 FEEFMTRHQVHEKEEFKALKTLSIFYQAGTSKAGNPIFYYVA-RRFKTGQINGDLLIYHV 1627
Query: 132 LLNIFP 137
LL + P
Sbjct: 1628 LLTLKP 1633
>gi|4557793 neurofibromin isoform 2 [Homo sapiens]
Length = 2818
Score = 30.4 bits (67), Expect = 3.2
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 72 FEDLFGQAPGGERDKASFLQTVQKFAEHSVRKRGHIDFIYLALRKMREYGVERDLAVYNQ 131
FE+ + E+++ L+T+ F + K G+ F Y+A R+ + + DL +Y+
Sbjct: 1548 FEEFMTRHQVHEKEEFKALKTLSIFYQAGTSKAGNPIFYYVA-RRFKTGQINGDLLIYHV 1606
Query: 132 LLNIFP 137
LL + P
Sbjct: 1607 LLTLKP 1612
>gi|8922699 CNDP dipeptidase 2 [Homo sapiens]
Length = 475
Score = 30.4 bits (67), Expect = 3.2
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 326 LYYPMQLDLEYVRSGWDNYEFDINEVEEGPVFAMCMAGAHDQATMAKWIQGLQETNPTLA 385
+Y + + + GWD+ F + E +G ++ D+ +A WI L+ T
Sbjct: 96 IYGHLDVQPAALEDGWDSEPFTLVE-RDGKLYGG--GSTDDKGPVAGWINALEAYQKTGQ 152
Query: 386 QIPVVFRLAGSTRELQTSSAGLEE 409
+IPV R E ++ S GL+E
Sbjct: 153 EIPVNVRFCLEGME-ESGSEGLDE 175
>gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo
sapiens]
Length = 1100
Score = 30.4 bits (67), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 YQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVF 286
Y + K++ GA D P P I S D+ +L+ + P RPVF
Sbjct: 993 YVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVF 1034
>gi|194733749 sorbin and SH3 domain containing 2 isoform 1 [Homo
sapiens]
Length = 666
Score = 30.4 bits (67), Expect = 3.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 YQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARPVF 286
Y + K++ GA D P P I S D+ +L+ + P RPVF
Sbjct: 559 YVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVF 600
>gi|169171308 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 29.6 bits (65), Expect = 5.5
Identities = 25/71 (35%), Positives = 26/71 (36%), Gaps = 20/71 (28%)
Query: 20 TCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPEPRQR----------PTKAL 69
TC AL G P R A SSE S SPP P QR PT+AL
Sbjct: 26 TCSPALAGPPPPSFPER----------AASSEGSPTHSPPHPPQRLQPPVRVVPKPTRAL 75
Query: 70 VPFEDLFGQAP 80
L Q P
Sbjct: 76 STLRQLHVQPP 86
>gi|89025853 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 29.6 bits (65), Expect = 5.5
Identities = 25/71 (35%), Positives = 26/71 (36%), Gaps = 20/71 (28%)
Query: 20 TCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPEPRQR----------PTKAL 69
TC AL G P R A SSE S SPP P QR PT+AL
Sbjct: 26 TCSPALAGPPPPSFPER----------AASSEGSPTHSPPHPPQRLQPPVRVVPKPTRAL 75
Query: 70 VPFEDLFGQAP 80
L Q P
Sbjct: 76 STLRQLHVQPP 86
>gi|42657886 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 29.6 bits (65), Expect = 5.5
Identities = 25/71 (35%), Positives = 26/71 (36%), Gaps = 20/71 (28%)
Query: 20 TCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPEPRQR----------PTKAL 69
TC AL G P R A SSE S SPP P QR PT+AL
Sbjct: 26 TCSPALAGPPPPSFPER----------AASSEGSPTHSPPHPPQRLQPPVRVVPKPTRAL 75
Query: 70 VPFEDLFGQAP 80
L Q P
Sbjct: 76 STLRQLHVQPP 86
>gi|42658266 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 29.6 bits (65), Expect = 5.5
Identities = 25/71 (35%), Positives = 26/71 (36%), Gaps = 20/71 (28%)
Query: 20 TCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPEPRQR----------PTKAL 69
TC AL G P R A SSE S SPP P QR PT+AL
Sbjct: 26 TCSPALAGPPPPSFPER----------AASSEGSPTHSPPHPPQRLQPPVRVVPKPTRAL 75
Query: 70 VPFEDLFGQAP 80
L Q P
Sbjct: 76 STLRQLHVQPP 86
>gi|156938257 leucine rich repeat containing 16B [Homo sapiens]
Length = 1372
Score = 29.3 bits (64), Expect = 7.2
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 330 MQLDLEYVRSGWDNYEF---DINEVEEGPVFAMCMAGAHDQATMAKWIQGLQETNPTLAQ 386
+Q D++ + DN EF D + +E + M A A++Q + + L+ + L Q
Sbjct: 175 VQWDVDTIYHAEDNREFNLLDFSHLESRDLALMVAALAYNQWFTKLYCKDLRLGSEVLEQ 234
Query: 387 IPVVFRLAGSTRELQTSSAGLE 408
+ +GS EL +AGL+
Sbjct: 235 VLHTLSKSGSLEELVLDNAGLK 256
>gi|24308227 zinc finger protein 687 [Homo sapiens]
Length = 1237
Score = 29.3 bits (64), Expect = 7.2
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 236 PDLSARVTIYQVPLPKDSTGAADPPQPHIVGIQSPDQQAALARHNPARP 284
PD+ A I+ P + G P+P VG +S D AA A P P
Sbjct: 19 PDIDANEAIHSGPEENEGPGGPGKPEPG-VGSESEDTAAASAGDGPGVP 66
>gi|108773787 retinoblastoma 1 [Homo sapiens]
Length = 928
Score = 28.9 bits (63), Expect = 9.4
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 33 VPRRLPRGLHCSAAAHSSEQSLVPSPPEPRQRPTKALVPFEDL 75
+P + PR +AAA ++E P PP P + P + P EDL
Sbjct: 1 MPPKTPRKTAATAAAAAAEPPAPPPPPPPEEDPEQDSGP-EDL 42
>gi|157671951 solute carrier family 4, anion exchanger, member 3
isoform 1 [Homo sapiens]
Length = 1232
Score = 28.9 bits (63), Expect = 9.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 395 GSTRELQTSSAGLEEPPLPEDHQEEDDNL 423
G L LEEPPL D +EEDD+L
Sbjct: 10 GGASPLPQVRVPLEEPPLSPDVEEEDDDL 38
>gi|157671953 solute carrier family 4, anion exchanger, member 3
isoform 2 [Homo sapiens]
Length = 1259
Score = 28.9 bits (63), Expect = 9.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 395 GSTRELQTSSAGLEEPPLPEDHQEEDDNL 423
G L LEEPPL D +EEDD+L
Sbjct: 10 GGASPLPQVRVPLEEPPLSPDVEEEDDDL 38
>gi|22749483 hypothetical protein LOC253868 [Homo sapiens]
Length = 134
Score = 28.9 bits (63), Expect = 9.4
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 12 GLCRAWGGTCGAALTGTSISQVPRRLPRGLHCSAAAHSSEQSLVPSPPEPRQRPTKALVP 71
G A GG GA S P L RGLHC S+ P P P P+ L P
Sbjct: 29 GFSEAKGGH-GAPRHSASHGATPSGLRRGLHCREG--PSDSGFQPHPGPPLSVPSGPLAP 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,942,573
Number of Sequences: 37866
Number of extensions: 950542
Number of successful extensions: 3404
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3386
Number of HSP's gapped (non-prelim): 33
length of query: 431
length of database: 18,247,518
effective HSP length: 105
effective length of query: 326
effective length of database: 14,271,588
effective search space: 4652537688
effective search space used: 4652537688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.