Search of human proteins with 19718788

Search of human proteins with 19718788

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19718788 RAD17 homolog isoform 3 [Homo sapiens]
         (505 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19718796 RAD17 homolog isoform 1 [Homo sapiens]                   1013   0.0  
gi|19718794 RAD17 homolog isoform 1 [Homo sapiens]                   1013   0.0  
gi|19718792 RAD17 homolog isoform 1 [Homo sapiens]                   1013   0.0  
gi|19718790 RAD17 homolog isoform 4 [Homo sapiens]                   1013   0.0  
gi|19718788 RAD17 homolog isoform 3 [Homo sapiens]                   1013   0.0  
gi|19718784 RAD17 homolog isoform 1 [Homo sapiens]                   1013   0.0  
gi|4506383 RAD17 homolog isoform 1 [Homo sapiens]                    1013   0.0  
gi|19718786 RAD17 homolog isoform 2 [Homo sapiens]                   1013   0.0  
gi|27501458 CTF18, chromosome transmission fidelity factor 18 ho...    33   0.61 
gi|22027480 pogo transposable element with KRAB domain [Homo sap...    30   3.9  
gi|41399285 chaperonin [Homo sapiens]                                  30   6.7  
gi|31542947 chaperonin [Homo sapiens]                                  30   6.7  
gi|239753468 PREDICTED: hypothetical protein [Homo sapiens]            29   8.8  
gi|239748036 PREDICTED: hypothetical protein XP_002346497 [Homo ...    29   8.8  
gi|239741930 PREDICTED: hypothetical protein XP_002342355 [Homo ...    29   8.8  
gi|239741928 PREDICTED: hypothetical protein XP_002342354 [Homo ...    29   8.8  
gi|167555127 CD180 molecule [Homo sapiens]                             29   8.8  
gi|17402909 tripartite motif protein TRIM29 [Homo sapiens]             29   8.8  

>gi|19718796 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 166 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 225

Query: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 226 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 285

Query: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 286 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 345

Query: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 346 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 405

Query: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 406 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 465

Query: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 466 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 525

Query: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 526 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 585

Query: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 586 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 645

Query: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 646 QPQPFSAQGDMEENIIIEDYESDGT 670


>gi|19718794 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 166 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 225

Query: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 226 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 285

Query: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 286 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 345

Query: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 346 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 405

Query: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 406 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 465

Query: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 466 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 525

Query: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 526 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 585

Query: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 586 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 645

Query: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 646 QPQPFSAQGDMEENIIIEDYESDGT 670


>gi|19718792 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 166 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 225

Query: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 226 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 285

Query: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 286 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 345

Query: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 346 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 405

Query: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 406 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 465

Query: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 466 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 525

Query: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 526 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 585

Query: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 586 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 645

Query: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 646 QPQPFSAQGDMEENIIIEDYESDGT 670


>gi|19718790 RAD17 homolog isoform 4 [Homo sapiens]
          Length = 584

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 80  MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 139

Query: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 140 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 199

Query: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 200 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 259

Query: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 260 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 319

Query: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 320 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 379

Query: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 380 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 439

Query: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 440 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 499

Query: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 500 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 559

Query: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 560 QPQPFSAQGDMEENIIIEDYESDGT 584


>gi|19718788 RAD17 homolog isoform 3 [Homo sapiens]
          Length = 505

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60

Query: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120

Query: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180

Query: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240

Query: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300

Query: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360

Query: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420

Query: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480

Query: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 481 QPQPFSAQGDMEENIIIEDYESDGT 505


>gi|19718784 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 166 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 225

Query: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 226 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 285

Query: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 286 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 345

Query: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 346 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 405

Query: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 406 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 465

Query: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 466 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 525

Query: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 526 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 585

Query: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 586 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 645

Query: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 646 QPQPFSAQGDMEENIIIEDYESDGT 670


>gi|4506383 RAD17 homolog isoform 1 [Homo sapiens]
          Length = 670

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 166 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 225

Query: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 226 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 285

Query: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 286 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 345

Query: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 346 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 405

Query: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 406 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 465

Query: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 466 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 525

Query: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 526 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 585

Query: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 586 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 645

Query: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 646 QPQPFSAQGDMEENIIIEDYESDGT 670


>gi|19718786 RAD17 homolog isoform 2 [Homo sapiens]
          Length = 681

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 505/505 (100%), Positives = 505/505 (100%)

Query: 1   MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 60
           MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS
Sbjct: 177 MFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDS 236

Query: 61  HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 120
           HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM
Sbjct: 237 HTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMM 296

Query: 121 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 180
           KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK
Sbjct: 297 KFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKK 356

Query: 181 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 240
           GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS
Sbjct: 357 GMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDS 416

Query: 241 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 300
           PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF
Sbjct: 417 PRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSF 476

Query: 301 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 360
           ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY
Sbjct: 477 ADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKY 536

Query: 361 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 420
           RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL
Sbjct: 537 RENCLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRL 596

Query: 421 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 480
           KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS
Sbjct: 597 KMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPAS 656

Query: 481 QPQPFSAQGDMEENIIIEDYESDGT 505
           QPQPFSAQGDMEENIIIEDYESDGT
Sbjct: 657 QPQPFSAQGDMEENIIIEDYESDGT 681


>gi|27501458 CTF18, chromosome transmission fidelity factor 18
           homolog [Homo sapiens]
          Length = 975

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)

Query: 116 PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNL 175
           PT+  + + R+  +   +        D   L  LC+    DIR+ IN+LQF  S+G+  L
Sbjct: 512 PTLPSRLVQRLQEVSLRQG----MRADPGVLAALCEKTDNDIRACINTLQFLYSRGQREL 567

Query: 176 RPR 178
             R
Sbjct: 568 SVR 570


>gi|22027480 pogo transposable element with KRAB domain [Homo
           sapiens]
          Length = 609

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 428 REHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPFSA 487
           R  G  +  + DE QL GG SAE    +      P  W  P+  N+ S+ P  QPQ F +
Sbjct: 98  RLEGEEESQNSDEWQLQGGTSAENEESD----VKPPDWPNPM--NATSQFP--QPQHFDS 149

Query: 488 QG 489
            G
Sbjct: 150 FG 151


>gi|41399285 chaperonin [Homo sapiens]
          Length = 573

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 5/63 (7%)

Query: 169 SKGENNLRPRKKGMSLKSDAVLSKSKRRKK----PDRVFENQEVQAIGGKDVSLFLFRAL 224
           SKG N +  R+ G+ L  DAV+++ K++ K    P+ + +   + A G K++   +  A+
Sbjct: 132 SKGANPVEIRR-GVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKEIGNIISDAM 190

Query: 225 GKI 227
            K+
Sbjct: 191 KKV 193


>gi|31542947 chaperonin [Homo sapiens]
          Length = 573

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 5/63 (7%)

Query: 169 SKGENNLRPRKKGMSLKSDAVLSKSKRRKK----PDRVFENQEVQAIGGKDVSLFLFRAL 224
           SKG N +  R+ G+ L  DAV+++ K++ K    P+ + +   + A G K++   +  A+
Sbjct: 132 SKGANPVEIRR-GVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKEIGNIISDAM 190

Query: 225 GKI 227
            K+
Sbjct: 191 KKV 193


>gi|239753468 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 86

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 427 DREHGMIDPDSGDEAQLNGGHSAEESL-GEPTQATVPETWSLPL 469
           DRE   +DP +G+     G H +  SL G   +   P+ W+LPL
Sbjct: 32  DREPTRVDPPAGEVQGGPGTHKSGPSLWGSSGRTGNPQEWTLPL 75


>gi|239748036 PREDICTED: hypothetical protein XP_002346497 [Homo
           sapiens]
          Length = 123

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 427 DREHGMIDPDSGDEAQLNGGHSAEESL-GEPTQATVPETWSLPL 469
           DRE   +DP +G+     G H +  SL G   +   P+ W+LPL
Sbjct: 69  DREPTRVDPPAGEVQGGPGTHKSGPSLWGSSGRTGNPQEWTLPL 112


>gi|239741930 PREDICTED: hypothetical protein XP_002342355 [Homo
           sapiens]
          Length = 86

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 427 DREHGMIDPDSGDEAQLNGGHSAEESL-GEPTQATVPETWSLPL 469
           DRE   +DP +G+     G H +  SL G   +   P+ W+LPL
Sbjct: 32  DREPTRVDPPAGEVQGGPGTHKSGPSLWGSSGRTGNPQEWTLPL 75


>gi|239741928 PREDICTED: hypothetical protein XP_002342354 [Homo
           sapiens]
          Length = 130

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 427 DREHGMIDPDSGDEAQLNGGHSAEESL-GEPTQATVPETWSLPL 469
           DRE   +DP +G+     G H +  SL G   +   P+ W+LPL
Sbjct: 76  DREPTRVDPPAGEVQGGPGTHKSGPSLWGSSGRTGNPQEWTLPL 119


>gi|167555127 CD180 molecule [Homo sapiens]
          Length = 661

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 54  NQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNP 113
           N  + D+   H  L   V  G  PLIF+   SL+G  + + LF      +  ISN+ F P
Sbjct: 90  NWIHEDTFQSHHQLSTLVLTGN-PLIFMAETSLNGPKSLKHLF----LIQTGISNLEFIP 144

Query: 114 V 114
           V
Sbjct: 145 V 145


>gi|17402909 tripartite motif protein TRIM29 [Homo sapiens]
          Length = 588

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 9/76 (11%)

Query: 145 SLELLCQGCSGDIRSAINS-LQFSSSKGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVF 203
           S E+LC  C G+ + A+ S L   +S  E +L+P  +G + +   +L       +P R F
Sbjct: 168 SEEVLCDSCIGNKQKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLL-------EPIRDF 220

Query: 204 ENQEVQAIGGKDVSLF 219
           E ++   + GK + LF
Sbjct: 221 EARKC-PVHGKTMELF 235


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,649,476
Number of Sequences: 37866
Number of extensions: 826269
Number of successful extensions: 2417
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2402
Number of HSP's gapped (non-prelim): 24
length of query: 505
length of database: 18,247,518
effective HSP length: 107
effective length of query: 398
effective length of database: 14,195,856
effective search space: 5649950688
effective search space used: 5649950688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.