LOC100289063 17040

Name: LOC100289063	Sequence: fasta or formatted (130aa)		NCBI GI: 239741928
Description: PREDICTED: hypothetical protein XP_002342354		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.1 4 1 C cysteine 0.8 1 1 D aspartate 2.3 3 1 E glutamate 8.5 11 1 F phenylalanine 0.0 0 0 G glycine 16.9 22 2 H histidine 3.8 5 1 I isoleucine 0.0 0 0 K lysine 5.4 7 1 L leucine 10.8 14 1 M methionine 1.5 2 1 N asparagine 1.5 2 1 P proline 13.1 17 2 Q glutamine 4.6 6 1 R arginine 6.9 9 1 S serine 6.2 8 2 T threonine 7.7 10 2 V valine 3.8 5 1 W tryptophan 3.1 4 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342354 LOC100290786 0.740 PREDICTED: hypothetical protein XP_002346497 LOC100289094 0.585 PREDICTED: hypothetical protein XP_002342355 LOC100292479 0.570 PREDICTED: hypothetical protein ESX1 0.027 extraembryonic, spermatogenesis, homeobox 1-like [Ho... PRB1 0.027 proline-rich protein BstNI subfamily 1 isoform 3 pre... COL4A3 0.023 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.023 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.023 alpha 3 type IV collagen isoform 1 precursor PCNXL3 0.023 pecanex-like 3 LOC100292858 0.019 PREDICTED: similar to hCG2029977 LOC100289944 0.019 PREDICTED: hypothetical protein XP_002347520 COL8A2 0.019 collagen, type VIII, alpha 2 PRB1 0.019 proline-rich protein BstNI subfamily 1 isoform 2 pre... COL5A2 0.019 alpha 2 type V collagen preproprotein COL11A2 0.019 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.019 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.019 collagen, type XI, alpha 2 isoform 1 preproprotein ... C16orf11 0.019 hypothetical protein LOC146325 ZNF687 0.019 zinc finger protein 687 COL7A1 0.019 alpha 1 type VII collagen precursor NEU4 0.019 sialidase 4 ARHGAP30 0.019 Rho GTPase activating protein 30 isoform 1 COL9A2 0.016 alpha 2 type IX collagen RAD17 0.016 RAD17 homolog isoform 1 RAD17 0.016 RAD17 homolog isoform 1 RAD17 0.016 RAD17 homolog isoform 1 RAD17 0.016 RAD17 homolog isoform 4 RAD17 0.016 RAD17 homolog isoform 3 RAD17 0.016 RAD17 homolog isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.