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Search of human proteins with 197099936
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197099936 SAP30-like isoform 2 [Homo sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197099936 SAP30-like isoform 2 [Homo sapiens] 287 2e-78
gi|197099958 SAP30-like isoform 3 [Homo sapiens] 271 1e-73
gi|13375862 SAP30-like isoform 1 [Homo sapiens] 267 3e-72
gi|4506783 Sin3A-associated protein, 30kDa [Homo sapiens] 164 3e-41
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 31 0.39
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 30 0.67
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 30 0.88
gi|11545757 nuclear RNA export factor 3 [Homo sapiens] 29 1.5
gi|20149640 dual oxidase 1 precursor [Homo sapiens] 28 2.0
gi|28872751 dual oxidase 1 precursor [Homo sapiens] 28 2.0
gi|132566532 dual oxidase 2 precursor [Homo sapiens] 28 2.6
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 28 2.6
gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Hom... 28 3.3
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens] 27 5.7
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens] 27 5.7
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens] 27 5.7
gi|91825557 kinesin light chain 3 [Homo sapiens] 27 5.7
gi|39725957 DAZ interacting protein 1 isoform 2 [Homo sapiens] 27 5.7
gi|7662436 DAZ interacting protein 1 isoform 1 [Homo sapiens] 27 5.7
gi|122937233 discs, large (Drosophila) homolog-associated protei... 27 7.4
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 27 7.4
gi|153792074 proline rich 12 [Homo sapiens] 27 7.4
gi|126091095 myotonic dystrophy protein kinase isoform 1 [Homo s... 26 9.7
gi|47059024 myotonic dystrophy protein kinase isoform 2 [Homo sa... 26 9.7
>gi|197099936 SAP30-like isoform 2 [Homo sapiens]
Length = 142
Score = 287 bits (734), Expect = 2e-78
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1 MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
Query: 61 KLDIDKSVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF 120
KLDIDKSVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF
Sbjct: 61 KLDIDKSVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF 120
Query: 121 IYMVKSNKSRLDQKSEGGKQLE 142
IYMVKSNKSRLDQKSEGGKQLE
Sbjct: 121 IYMVKSNKSRLDQKSEGGKQLE 142
>gi|197099958 SAP30-like isoform 3 [Homo sapiens]
Length = 137
Score = 271 bits (693), Expect = 1e-73
Identities = 137/142 (96%), Positives = 137/142 (96%), Gaps = 5/142 (3%)
Query: 1 MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1 MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
Query: 61 KLDIDKSVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF 120
KLDIDKS LQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF
Sbjct: 61 KLDIDKS-----LQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF 115
Query: 121 IYMVKSNKSRLDQKSEGGKQLE 142
IYMVKSNKSRLDQKSEGGKQLE
Sbjct: 116 IYMVKSNKSRLDQKSEGGKQLE 137
>gi|13375862 SAP30-like isoform 1 [Homo sapiens]
Length = 183
Score = 267 bits (682), Expect = 3e-72
Identities = 142/183 (77%), Positives = 142/183 (77%), Gaps = 41/183 (22%)
Query: 1 MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1 MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
Query: 61 KLDIDKSV-----------------------------------------DLFQLQVNTLR 79
KLDIDKSV DLFQLQVNTLR
Sbjct: 61 KLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLR 120
Query: 80 RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 139
RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK
Sbjct: 121 RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 180
Query: 140 QLE 142
QLE
Sbjct: 181 QLE 183
>gi|4506783 Sin3A-associated protein, 30kDa [Homo sapiens]
Length = 220
Score = 164 bits (414), Expect = 3e-41
Identities = 91/171 (53%), Positives = 105/171 (61%), Gaps = 45/171 (26%)
Query: 10 SREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDKS-- 67
S GPP A A PG GQ CCL EDGERC R AGNASFSKR+QKSISQKK+K+++DKS
Sbjct: 51 SAAGPPGA---AGPGPGQLCCLREDGERCGRAAGNASFSKRIQKSISQKKVKIELDKSAR 107
Query: 68 ----------------------------------------VDLFQLQVNTLRRYKRHYKL 87
VDL+QLQVNTLRRYKRH+KL
Sbjct: 108 HLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRHFKL 167
Query: 88 QTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGG 138
TRPG NKAQL E V HFR+IPVNEK+TL YFIY VK++K++ D K + G
Sbjct: 168 PTRPGLNKAQLVEIVGCHFRSIPVNEKDTLTYFIYSVKNDKNKSDLKVDSG 218
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 30.8 bits (68), Expect = 0.39
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 27 QSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDK 66
QSC I+ E CV A S KR SI++KK K +K
Sbjct: 545 QSCTTIQHPEHCVTSADQHSAEKRSLSSINKKKGKPQTEK 584
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 30.0 bits (66), Expect = 0.67
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 11 REGPPAAPAAAAPGYGQSCCLIEDGERCVR 40
REGP AAPA A PG G S L +G R
Sbjct: 1380 REGPGAAPAFAGPGGGGSGALEAEGRAGAR 1409
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 29.6 bits (65), Expect = 0.88
Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Query: 13 GPPAAPAAAAPGYGQSCCLIED 34
GPP PAAAA GYG C L+ D
Sbjct: 1526 GPPRGPAAAAAGYG--CPLLSD 1545
>gi|11545757 nuclear RNA export factor 3 [Homo sapiens]
Length = 531
Score = 28.9 bits (63), Expect = 1.5
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 33 EDGERC---VRPAGNASFSKRVQKSISQKKLKLDIDKSVDLFQ--LQVNTLRRYKRHYKL 87
ED E+ V PAG F R KS +++KL +++ D+ Q L + L Y
Sbjct: 176 EDNEKISIFVNPAGIPHFVHRELKSEKVEQIKLAMNQQCDVSQEALDIQRLPFYPDMVNR 235
Query: 88 QTRPGFNKAQ-LAETVSRHFRNIP 110
T+ N + +A ++ H NIP
Sbjct: 236 DTKMASNPRKCMAASLDVHEENIP 259
>gi|20149640 dual oxidase 1 precursor [Homo sapiens]
Length = 1551
Score = 28.5 bits (62), Expect = 2.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 94 NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 131
+KAQLAE V FR +KE L + F +M++ + S L
Sbjct: 892 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHNSEL 931
>gi|28872751 dual oxidase 1 precursor [Homo sapiens]
Length = 1551
Score = 28.5 bits (62), Expect = 2.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 94 NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 131
+KAQLAE V FR +KE L + F +M++ + S L
Sbjct: 892 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHNSEL 931
>gi|132566532 dual oxidase 2 precursor [Homo sapiens]
Length = 1548
Score = 28.1 bits (61), Expect = 2.6
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 94 NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 131
+KAQLAE V FR +KE L + F +M++ + S L
Sbjct: 896 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHDSEL 935
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 28.1 bits (61), Expect = 2.6
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 3 GFSTEEDSREGPPAAPAAAAPG-----YGQSCCLIEDGERCVRP 41
GF+T PP PA A PG +GQ+ GE +RP
Sbjct: 1274 GFTTLATGYPSPPPGPAPAGPGDSLDVFGQTPSPRRTGEELLRP 1317
>gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Homo
sapiens]
Length = 2063
Score = 27.7 bits (60), Expect = 3.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 5 STEEDSREGPPAAPAAAAPGY 25
S+ E+ EGPP P A +P Y
Sbjct: 249 SSSEEEEEGPPQLPGAQSPAY 269
>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 26.9 bits (58), Expect = 5.7
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 54 SISQKKLKLDIDKSVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNE 113
+++ KKL+ ++DL L++ ++ K +Y L+T P K +L E V R R + + E
Sbjct: 75 AVAVKKLEEMRKATIDL--LEIESMELNKLYYLLETLPNSIKRELEECV-RDARRLNLFE 131
Query: 114 KETLAYFIYMVKSNKSRLDQK 134
T+ I ++ L +K
Sbjct: 132 INTIKMRITRTENEIELLKKK 152
>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 26.9 bits (58), Expect = 5.7
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 54 SISQKKLKLDIDKSVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNE 113
+++ KKL+ ++DL L++ ++ K +Y L+T P K +L E V R R + + E
Sbjct: 75 AVAVKKLEEMRKATIDL--LEIESMELNKLYYLLETLPNSIKRELEECV-RDARRLNLFE 131
Query: 114 KETLAYFIYMVKSNKSRLDQK 134
T+ I ++ L +K
Sbjct: 132 INTIKMRITRTENEIELLKKK 152
>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 26.9 bits (58), Expect = 5.7
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 54 SISQKKLKLDIDKSVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNE 113
+++ KKL+ ++DL L++ ++ K +Y L+T P K +L E V R R + + E
Sbjct: 75 AVAVKKLEEMRKATIDL--LEIESMELNKLYYLLETLPNSIKRELEECV-RDARRLNLFE 131
Query: 114 KETLAYFIYMVKSNKSRLDQK 134
T+ I ++ L +K
Sbjct: 132 INTIKMRITRTENEIELLKKK 152
>gi|91825557 kinesin light chain 3 [Homo sapiens]
Length = 504
Score = 26.9 bits (58), Expect = 5.7
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 4 FSTEEDSREGPPAAPAAAA 22
F +EE+ R+GP AA AAAA
Sbjct: 178 FPSEEEERKGPEAAGAAAA 196
>gi|39725957 DAZ interacting protein 1 isoform 2 [Homo sapiens]
Length = 867
Score = 26.9 bits (58), Expect = 5.7
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 12 EGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDK---SV 68
EGP A AAAA G C P F R++ ++ +D+DK +V
Sbjct: 27 EGPDVAVAAAAAGAASMAC--APPSAASGPLPFFQFRPRLESVDWRRLSAIDVDKVAGAV 84
Query: 69 DLFQLQVNTL 78
D+ LQ N +
Sbjct: 85 DVLTLQENIM 94
>gi|7662436 DAZ interacting protein 1 isoform 1 [Homo sapiens]
Length = 848
Score = 26.9 bits (58), Expect = 5.7
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 12 EGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDK---SV 68
EGP A AAAA G C P F R++ ++ +D+DK +V
Sbjct: 27 EGPDVAVAAAAAGAASMAC--APPSAASGPLPFFQFRPRLESVDWRRLSAIDVDKVAGAV 84
Query: 69 DLFQLQVNTL 78
D+ LQ N +
Sbjct: 85 DVLTLQENIM 94
>gi|122937233 discs, large (Drosophila) homolog-associated protein 3
[Homo sapiens]
Length = 979
Score = 26.6 bits (57), Expect = 7.4
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 9 DSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDKSV 68
D GP AP PG G+ IE G R + +G AS R + K L+ +++K
Sbjct: 753 DGSPGPAPAPTPG-PGAGRRDSWIERGSRSLPDSGRASPCPRDGEWFI-KMLRAEVEKLE 810
Query: 69 DLFQLQVNTLRRYKRH----YKLQTRPGFNKAQLAETVSRHFR 107
Q Y+ K+++ G + L++ V + FR
Sbjct: 811 HWCQQMEREAEDYELPEEILEKIRSAVGSTQLLLSQKVQQFFR 853
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 26.6 bits (57), Expect = 7.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 7 EEDSREGPPAAPAAAAPGYGQS 28
EE R+G PA P AA G G+S
Sbjct: 947 EEHGRQGAPAPPPAARAGPGRS 968
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 26.6 bits (57), Expect = 7.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 12 EGPPAAPAAAAPG 24
+GPP APAAA PG
Sbjct: 1420 DGPPLAPAAAVPG 1432
>gi|126091095 myotonic dystrophy protein kinase isoform 1 [Homo
sapiens]
Length = 639
Score = 26.2 bits (56), Expect = 9.7
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 3 GFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGE 36
G T D REG P GY SC + D E
Sbjct: 391 GGETLSDIREGAPLGVHLPFVGYSYSCMALRDSE 424
>gi|47059024 myotonic dystrophy protein kinase isoform 2 [Homo
sapiens]
Length = 629
Score = 26.2 bits (56), Expect = 9.7
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 3 GFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGE 36
G T D REG P GY SC + D E
Sbjct: 381 GGETLSDIREGAPLGVHLPFVGYSYSCMALRDSE 414
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,665,820
Number of Sequences: 37866
Number of extensions: 232565
Number of successful extensions: 988
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 968
Number of HSP's gapped (non-prelim): 29
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.