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Search of human proteins with 194328689
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194328689 storkhead box 1 isoform c [Homo sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194328689 storkhead box 1 isoform c [Homo sapiens] 344 2e-95
gi|194328687 storkhead box 1 isoform b [Homo sapiens] 312 8e-86
gi|194328691 storkhead box 1 isoform a [Homo sapiens] 312 8e-86
gi|63025200 storkhead box 1 isoform a [Homo sapiens] 312 8e-86
gi|194328693 storkhead box 1 isoform d [Homo sapiens] 94 4e-20
gi|55742730 storkhead box 2 [Homo sapiens] 70 9e-13
gi|29171705 melanoma antigen family D, 2 [Homo sapiens] 34 0.068
gi|19387846 melanoma antigen family D, 2 [Homo sapiens] 34 0.068
gi|41350320 melanoma antigen family D, 2 [Homo sapiens] 34 0.068
gi|110611172 amnionless protein precursor [Homo sapiens] 32 0.26
gi|239755540 PREDICTED: hypothetical protein [Homo sapiens] 28 2.9
gi|239755457 PREDICTED: similar to patatin-like phospholipase do... 28 2.9
gi|239749992 PREDICTED: hypothetical protein [Homo sapiens] 28 2.9
gi|239744303 PREDICTED: hypothetical protein XP_002343093 [Homo ... 28 2.9
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 28 3.8
gi|32698724 patatin-like phospholipase domain containing 2 [Homo... 28 3.8
gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo... 28 3.8
gi|33519450 NLR family, pyrin domain containing 9 [Homo sapiens] 27 6.4
gi|31542747 catechol-O-methyltransferase domain containing 1 [Ho... 27 6.4
gi|169213727 PREDICTED: hypothetical protein [Homo sapiens] 27 8.4
>gi|194328689 storkhead box 1 isoform c [Homo sapiens]
Length = 169
Score = 344 bits (883), Expect = 2e-95
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL
Sbjct: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
Query: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV
Sbjct: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGHRVWDLIIQSFWMD 169
PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGHRVWDLIIQSFWMD
Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGHRVWDLIIQSFWMD 169
>gi|194328687 storkhead box 1 isoform b [Homo sapiens]
Length = 227
Score = 312 bits (800), Expect = 8e-86
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL
Sbjct: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
Query: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV
Sbjct: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG
Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
>gi|194328691 storkhead box 1 isoform a [Homo sapiens]
Length = 989
Score = 312 bits (800), Expect = 8e-86
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL
Sbjct: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
Query: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV
Sbjct: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG
Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
>gi|63025200 storkhead box 1 isoform a [Homo sapiens]
Length = 989
Score = 312 bits (800), Expect = 8e-86
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL
Sbjct: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
Query: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV
Sbjct: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG
Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
>gi|194328693 storkhead box 1 isoform d [Homo sapiens]
Length = 879
Score = 94.4 bits (233), Expect = 4e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Query: 111 MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG
Sbjct: 1 MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 45
>gi|55742730 storkhead box 2 [Homo sapiens]
Length = 926
Score = 70.1 bits (170), Expect = 9e-13
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 104 GDVFPVQMNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
GDV P+ M+PI+QSQF+PLGE+LC AIS MN+A+ VTQE+L+E L +PG
Sbjct: 56 GDVSPISMSPISQSQFIPLGEILCLAISAMNSARKPVTQEALMEHLTTCFPG 107
>gi|29171705 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 33.9 bits (76), Expect = 0.068
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 27 AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79
A+ GGR V +A + AR FW AR ASR W RR +L +R+P A
Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250
Query: 80 LQVLRDAWRRRALR 93
R RRRA +
Sbjct: 251 ---RRGKARRRAAK 261
>gi|19387846 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 33.9 bits (76), Expect = 0.068
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 27 AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79
A+ GGR V +A + AR FW AR ASR W RR +L +R+P A
Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250
Query: 80 LQVLRDAWRRRALR 93
R RRRA +
Sbjct: 251 ---RRGKARRRAAK 261
>gi|41350320 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 33.9 bits (76), Expect = 0.068
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 27 AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79
A+ GGR V +A + AR FW AR ASR W RR +L +R+P A
Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250
Query: 80 LQVLRDAWRRRALR 93
R RRRA +
Sbjct: 251 ---RRGKARRRAAK 261
>gi|110611172 amnionless protein precursor [Homo sapiens]
Length = 453
Score = 32.0 bits (71), Expect = 0.26
Identities = 33/105 (31%), Positives = 40/105 (38%), Gaps = 6/105 (5%)
Query: 18 RLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRLAFQGWLRRGVLLVRAPP 77
RL A AE V A R + W + A A +A L VLLV APP
Sbjct: 323 RLARALLADVAENGEALGVLEATMRESGAHVWGSSAAGLAGGVAAAVLLALLVLLV-APP 381
Query: 78 ACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFVPL 122
+ R WRR P G + VF V T S+ +PL
Sbjct: 382 LLRRAGRLRWRRHEAAAPAGAPLGFRNPVFDV-----TASEELPL 421
>gi|239755540 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 28.5 bits (62), Expect = 2.9
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 78 ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132
ACL + +AW R R P+ G RAV P+ M P Q P G A +
Sbjct: 76 ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135
Query: 133 MNTAQIVVTQESLLERLMK 151
+ V Q SL+ +++
Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154
>gi|239755457 PREDICTED: similar to patatin-like phospholipase
domain containing 2 [Homo sapiens]
Length = 226
Score = 28.5 bits (62), Expect = 2.9
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 53 LARAASRLAFQGWLRR----GVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFP 108
L+ AA R A GW+R G L + Q+L + PP R+RA D P
Sbjct: 132 LSCAAYREALPGWMRNNLSLGDALAKWEECQRQLLLGLFCTNVAFPPEALRMRAPADPAP 191
Query: 109 VQMNPITQSQFVPLG 123
+P Q P G
Sbjct: 192 APADP-ASPQHQPAG 205
>gi|239749992 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 28.5 bits (62), Expect = 2.9
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 78 ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132
ACL + +AW R R P+ G RAV P+ M P Q P G A +
Sbjct: 76 ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135
Query: 133 MNTAQIVVTQESLLERLMK 151
+ V Q SL+ +++
Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154
>gi|239744303 PREDICTED: hypothetical protein XP_002343093 [Homo
sapiens]
Length = 170
Score = 28.5 bits (62), Expect = 2.9
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 78 ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132
ACL + +AW R R P+ G RAV P+ M P Q P G A +
Sbjct: 76 ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135
Query: 133 MNTAQIVVTQESLLERLMK 151
+ V Q SL+ +++
Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 28.1 bits (61), Expect = 3.8
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 18 RLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRLAFQGWLRRGVLLVRA-- 75
+L G A GR V R R A + RAASR A +G RR + A
Sbjct: 796 KLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASR-ARKGESRRPLPANSAGR 854
Query: 76 ----PPACLQVLRDAWRRRALRPPR 96
PA + R +W RA RP R
Sbjct: 855 PALPSPAAARSARGSWGLRASRPSR 879
>gi|32698724 patatin-like phospholipase domain containing 2 [Homo
sapiens]
Length = 504
Score = 28.1 bits (61), Expect = 3.8
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 53 LARAASRLAFQGWLRR----GVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFP 108
L+ AA R A GW+R G L + Q+L + PP R+RA D P
Sbjct: 410 LSCAAYREALPGWMRNNLSLGDALAKWEECQRQLLLGLFCTNVAFPPEALRMRAPADPAP 469
Query: 109 VQMNP 113
+P
Sbjct: 470 APADP 474
>gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo
sapiens]
Length = 335
Score = 28.1 bits (61), Expect = 3.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 86 AWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAI 130
AWRR P R R++ VG V + + P+ + VP+ E C A+
Sbjct: 39 AWRRAW--PRRRRRLQQVGTVAKLWIYPVKSCKGVPVSEAECTAM 81
>gi|33519450 NLR family, pyrin domain containing 9 [Homo sapiens]
Length = 991
Score = 27.3 bits (59), Expect = 6.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 141 TQESLLERLMKHYPGHRVWDLIIQSF 166
++E + + L KHYPG + W++ + F
Sbjct: 51 SKEDVAKLLDKHYPGKQAWEVTLNLF 76
>gi|31542747 catechol-O-methyltransferase domain containing 1 [Homo
sapiens]
Length = 262
Score = 27.3 bits (59), Expect = 6.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 76 PPACLQVLRDAWRRRALRPPRG 97
P L VLR WR + L+PP+G
Sbjct: 204 PGGILAVLRVLWRGKVLQPPKG 225
>gi|169213727 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 26.9 bits (58), Expect = 8.4
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 2 ARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGR---AVFRAFRRANAR-CFWNARLARAA 57
AR Q A + L L A + AG A GG A FRR R C ARL +A
Sbjct: 27 ARGPQKATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGKAP 86
Query: 58 SRLAFQGWLR 67
S A G R
Sbjct: 87 SACAGGGCRR 96
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.330 0.139 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,487,961
Number of Sequences: 37866
Number of extensions: 240349
Number of successful extensions: 785
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 772
Number of HSP's gapped (non-prelim): 20
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.