Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PRPSAP2 Sequence: fasta or formatted (369aa) NCBI GI: 4506133
Description:

phosphoribosyl pyrophosphate synthetase-associated protein 2

Referenced in:

Pentose Phosphate Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         27           3
 C cysteine            1.9          7           1
 D aspartate           5.1         19           2
 E glutamate           6.8         25           2
 F phenylalanine       3.0         11           2
 G glycine             5.1         19           2
 H histidine           2.2          8           1
 I isoleucine         10.3         38           2
 K lysine              6.5         24           2
 L leucine             7.6         28           2
 M methionine          4.1         15           2
 N asparagine          3.0         11           1
 P proline             5.1         19           2
 Q glutamine           3.8         14           1
 R arginine            5.4         20           2
 S serine              7.9         29           2
 T threonine           4.3         16           2
 V valine              8.4         31           3
 W tryptophan          0.0          0           0
 Y tyrosine            2.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoribosyl pyrophosphate synthetase-associated pr... 
PRPSAP1               0.777   phosphoribosyl pyrophosphate synthetase-associated ...
PRPS2                 0.367   phosphoribosyl pyrophosphate synthetase 2 isoform 2 [...
PRPS1L1               0.367   phosphoribosyl pyrophosphate synthetase 1-like 1 [Ho...
PRPS2                 0.365   phosphoribosyl pyrophosphate synthetase 2 isoform 1 ...
PRPS1                 0.363   phosphoribosyl pyrophosphate synthetase 1 
LOC100130673          0.033   PREDICTED: similar to hCG1804306 
LOC100130673          0.033   PREDICTED: similar to hCG1804306 
LOC100130673          0.033   PREDICTED: similar to hCG1804306 
LOC100130673          0.033   PREDICTED: similar to hCG1804306 
CEP170                0.006   centrosomal protein 170kDa isoform beta 
CEP170                0.006   centrosomal protein 170kDa isoform alpha 
CEP170                0.006   centrosomal protein 170kDa isoform gamma 
CCT4                  0.006   chaperonin containing TCP1, subunit 4 (delta) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press