Search of human proteins with 193211395

Search of human proteins with 193211395

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|193211395 calcium homeostasis modulator 3 [Homo sapiens]
         (344 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|193211395 calcium homeostasis modulator 3 [Homo sapiens]           700   0.0  
gi|194440685 calcium homeostasis modulator 1 [Homo sapiens]           310   9e-85
gi|21361521 calcium homeostasis modulator 2 [Homo sapiens]            130   2e-30
gi|62988336 hypothetical protein LOC441168 [Homo sapiens]             102   4e-22
gi|24308454 hypothetical protein LOC254228 [Homo sapiens]              87   3e-17
gi|23308563 hypothetical protein LOC221301 [Homo sapiens]              43   5e-04
gi|160948610 E3 ubiquitin-protein ligase UBR3 [Homo sapiens]           31   1.8  
gi|46397377 chromosome 14 open reading frame 68 [Homo sapiens]         31   1.8  
gi|166235173 solute carrier family 44, member 3 isoform 1 [Homo ...    30   3.2  
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    30   3.2  
gi|166235171 solute carrier family 44, member 3 isoform 2 [Homo ...    30   3.2  
gi|30425506 transmembrane protein 52 [Homo sapiens]                    28   9.2  
gi|111160385 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...    28   9.2  

>gi|193211395 calcium homeostasis modulator 3 [Homo sapiens]
          Length = 344

 Score =  700 bits (1807), Expect = 0.0
 Identities = 344/344 (100%), Positives = 344/344 (100%)

Query: 1   MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPP 60
           MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPP
Sbjct: 1   MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPP 60

Query: 61  LALFLCGLLANRQSVVMVEEWRRPAGHRRKDPGIIRYMCSSVLQRALAAPLVWILLALLD 120
           LALFLCGLLANRQSVVMVEEWRRPAGHRRKDPGIIRYMCSSVLQRALAAPLVWILLALLD
Sbjct: 61  LALFLCGLLANRQSVVMVEEWRRPAGHRRKDPGIIRYMCSSVLQRALAAPLVWILLALLD 120

Query: 121 GKCFVCAFSSSVDPEKFLDFANMTPSQVQLFLAKVPCKEDELVRDSPARKAVSRYLRCLS 180
           GKCFVCAFSSSVDPEKFLDFANMTPSQVQLFLAKVPCKEDELVRDSPARKAVSRYLRCLS
Sbjct: 121 GKCFVCAFSSSVDPEKFLDFANMTPSQVQLFLAKVPCKEDELVRDSPARKAVSRYLRCLS 180

Query: 181 QAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFDETCCEHARDFAH 240
           QAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFDETCCEHARDFAH
Sbjct: 181 QAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFDETCCEHARDFAH 240

Query: 241 RCVLHFFASMRSELQARGLRRGNAGRRLELPAVPEPPEGLDSGSGKAHLRAISSREQVDR 300
           RCVLHFFASMRSELQARGLRRGNAGRRLELPAVPEPPEGLDSGSGKAHLRAISSREQVDR
Sbjct: 241 RCVLHFFASMRSELQARGLRRGNAGRRLELPAVPEPPEGLDSGSGKAHLRAISSREQVDR 300

Query: 301 LLSTWYSSKPPLDLAASPGLCGGGLSHRAPTLALGTRLSQHTDV 344
           LLSTWYSSKPPLDLAASPGLCGGGLSHRAPTLALGTRLSQHTDV
Sbjct: 301 LLSTWYSSKPPLDLAASPGLCGGGLSHRAPTLALGTRLSQHTDV 344


>gi|194440685 calcium homeostasis modulator 1 [Homo sapiens]
          Length = 346

 Score =  310 bits (795), Expect = 9e-85
 Identities = 160/339 (47%), Positives = 215/339 (63%), Gaps = 17/339 (5%)

Query: 1   MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPP 60
           MDKFRM+FQ  QS+ ES MNGIC ++A  + ++YS+FDFNCPCL  YNA Y  G+LL PP
Sbjct: 2   MDKFRMIFQFLQSNQESFMNGICGIMALASAQMYSAFDFNCPCLPGYNAAYSAGILLAPP 61

Query: 61  LALFLCGLLANRQSVVMVEEWRRPAGHRRKDPGIIRYMCSSVLQRALAAPLVWILLALLD 120
           L LFL GL+ N    ++ EEW+RP G R KDP ++RYM  S+ QRAL AP+VW+ + LLD
Sbjct: 62  LVLFLLGLVMNNNVSMLAEEWKRPLGRRAKDPAVLRYMFCSMAQRALIAPVVWVAVTLLD 121

Query: 121 GKCFVCAFSSSVDPEKFLDFANMTPS----QVQLFLAKVPCKE----DELVRDSPARKAV 172
           GKCF+CAF ++V P   L   ++ P     ++   LA+VPC E    D L+    AR+  
Sbjct: 122 GKCFLCAFCTAV-PVSALGNGSLAPGLPAPELARLLARVPCPEIYDGDWLL----AREVA 176

Query: 173 SRYLRCLSQAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFDETCC 232
            RYLRC+SQA+GWS  LL  + AF+ R +RPCF Q  FL+ +YWS+Y+D+E+KLFDETC 
Sbjct: 177 VRYLRCISQALGWSFVLLTTLLAFVVRSVRPCFTQAAFLKSKYWSHYIDIERKLFDETCT 236

Query: 233 EHARDFAHRCVLHFFASMRSELQARGLRRGNAGRRLELPAVPEPPEGLDSGSGKAHLRAI 292
           EHA+ FA  C+  FF +M  +L+  G   G         A P  P+G +    K  LR I
Sbjct: 237 EHAKAFAKVCIQQFFEAMNHDLEL-GHTHGTLATAPASAAAPTTPDGAEEEREK--LRGI 293

Query: 293 SSREQVDRLLSTWYSSKPPLDLA-ASPGLCGGGLSHRAP 330
           + +  ++RLL++W+  KPPL L    P L G G +   P
Sbjct: 294 TDQGTMNRLLTSWHKCKPPLRLGQEEPPLMGNGWAGGGP 332


>gi|21361521 calcium homeostasis modulator 2 [Homo sapiens]
          Length = 323

 Score =  130 bits (327), Expect = 2e-30
 Identities = 88/252 (34%), Positives = 122/252 (48%), Gaps = 13/252 (5%)

Query: 2   DKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPPL 61
           + FR L   F+S    + NG+  L    + +L+S   F+CPC    N LYGL  +  P L
Sbjct: 7   ENFRFLSLFFKSKDVMIFNGLVALGTVGSQELFSVVAFHCPCSPARNYLYGLAAIGVPAL 66

Query: 62  ALFLCGLLANRQSVVMVEEWRRPAGHRRK---DPGIIRYMCSSVLQRALAAPLVWILLAL 118
            LF+ G++ N  +  +V E +    HRR           + SS+L RA  AP+ W +++L
Sbjct: 67  VLFIIGIILNNHTWNLVAECQ----HRRTKNCSAAPTFLLLSSILGRAAVAPVTWSVISL 122

Query: 119 LDGKCFVCAFSSSVDPEKFLDFANMTPS-QVQLFLAKVPCKE--DELVRDSPARKAVSRY 175
           L G+ +VCA S  VDP          PS      LA+ PCKE  D L   S  R+ VSR 
Sbjct: 123 LRGEAYVCALSEFVDPSSLTAREEHFPSAHATEILARFPCKENPDNL---SDFREEVSRR 179

Query: 176 LRCLSQAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFDETCCEHA 235
           LR  SQ  GW +  ++ I  FL +CL+       + Q  YW+ Y   E +LF  T   H+
Sbjct: 180 LRYESQLFGWLLIGVVAILVFLTKCLKHYCSPLSYRQEAYWAQYRANEDQLFQRTAEVHS 239

Query: 236 RDFAHRCVLHFF 247
           R  A   V  FF
Sbjct: 240 RVLAANNVRRFF 251


>gi|62988336 hypothetical protein LOC441168 [Homo sapiens]
          Length = 315

 Score =  102 bits (255), Expect = 4e-22
 Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 22/255 (8%)

Query: 1   MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPP 60
           M+KFR +         ++  G+  LL A   +++S+  F CPC   +N  YGL  LL P 
Sbjct: 1   MEKFRAVLDLHVKHHSALGYGLVTLLTAGGERIFSAVAFQCPCSAAWNLPYGLVFLLVPA 60

Query: 61  LALFLCGLLANRQSVVMVEEWRRPAG----HRRKDPGIIR--YMCSSVLQRALAAPLVWI 114
           LALFL G       V+    WR   G     R      +R   +C+ +   A  APL W+
Sbjct: 61  LALFLLGY------VLSARTWRLLTGCCSSARASCGSALRGSLVCTQISAAAALAPLTWV 114

Query: 115 LLALLDGKCFVCAFSSSVDPEKFLDFANMTPSQVQLFLAKVPCKEDEL--VRDSPARKAV 172
            +ALL G  + CA + S    + L          +L L  VPC + +   V+D      +
Sbjct: 115 AVALLGGAFYECAATGSAAFAQRLCLGRNRSCAAELPL--VPCNQAKASDVQD------L 166

Query: 173 SRYLRCLSQAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFDETCC 232
            + L+  SQ +GW +  ++II   +   +  C     FLQ ++W  Y++ EQ++      
Sbjct: 167 LKDLKAQSQVLGWILIAVVIIILLIFTSVTRCLSPVSFLQLKFWKIYLEQEQQILKSKAT 226

Query: 233 EHARDFAHRCVLHFF 247
           EHA + A   +  FF
Sbjct: 227 EHATELAKENIKCFF 241


>gi|24308454 hypothetical protein LOC254228 [Homo sapiens]
          Length = 309

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 1   MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVHYNALYGLGLLLTPP 60
           MD F+ + + F +    +      LL   + +L+S   F CPC    N  YGL  L  P 
Sbjct: 1   MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTE-NMTYGLVFLFAPA 59

Query: 61  LALFLCGLLANRQSVVMVEEWRR------------PAGHRRKDPGIIRYMCSSVLQRALA 108
             L + G   N +S      WR             P GH  +      Y+   +   +L 
Sbjct: 60  WVLLILGFFLNNRS------WRLFTGCCVNPRKIFPRGHSCR----FFYVLGQITLSSLV 109

Query: 109 APLVWILLALLDGKCFVCAFSSSVDPEKFLDFANMTPSQVQLFLAKVPCKEDELVRDSPA 168
           AP++W+ +ALL+G  + CA S +             P +    L KV C +  ++     
Sbjct: 110 APVMWLSVALLNGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSML--PTV 167

Query: 169 RKAVSRYLRCLSQAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFD 228
            + +   L+  SQ +GW +       + L  C   C  +  +LQ  +W  Y   E++  +
Sbjct: 168 NEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLE 227

Query: 229 ETCCEHARDFAHRCVLHFFASMRSE 253
            T  ++A   + R +  FF + R +
Sbjct: 228 NTFLDYANKLSERNLKCFFENKRPD 252


>gi|23308563 hypothetical protein LOC221301 [Homo sapiens]
          Length = 128

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 17/54 (31%), Positives = 32/54 (59%)

Query: 183 IGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSNYVDLEQKLFDETCCEHAR 236
           +GW +  L  IAA ++ C+  C      LQ  YW++++  E++LF++   +H+R
Sbjct: 2   LGWILITLATIAALVSCCVAKCCSPLTSLQHCYWTSHLQNERELFEQAAEQHSR 55


>gi|160948610 E3 ubiquitin-protein ligase UBR3 [Homo sapiens]
          Length = 1888

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 10/70 (14%)

Query: 265 GRRLELPAVPEPPEGLDSGSGKAHLRAISSR-------EQVDRLLSTWYSSKPPLDLAA- 316
           G++   P +P P   LD  +  AHL+A  SR       E++  LL    S++ PL  AA 
Sbjct: 11  GQQPSQPELPAPGLALDKAATAAHLKAALSRPDNRAGAEELQALLERVLSAERPLAAAAG 70

Query: 317 --SPGLCGGG 324
                  GGG
Sbjct: 71  GEDAAAAGGG 80


>gi|46397377 chromosome 14 open reading frame 68 [Homo sapiens]
          Length = 308

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 74  SVVMVEEWRRPAGHRRKD-PGI-IRYMCSSVLQRALAAPL 111
           S  ++ EW  PAGH R D PG+ +   C+ VL  A+A P+
Sbjct: 199 SYAVLCEWLSPAGHSRPDVPGVLVAGGCAGVLAWAVATPM 238


>gi|166235173 solute carrier family 44, member 3 isoform 1 [Homo
           sapiens]
          Length = 653

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 9/70 (12%)

Query: 1   MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVH-YNALYGLGLLLTP 59
           +D    +     S  ++++ G+C+L  A+++ +  +F F    LVH + +L  LGL    
Sbjct: 198 VDTLHRILSGIMSGRDTIL-GLCILALALSLAMMFTFRFITTLLVHIFISLVILGL---- 252

Query: 60  PLALFLCGLL 69
              LF+CG+L
Sbjct: 253 ---LFVCGVL 259


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 5/65 (7%)

Query: 274  PEPPEGLDSGSGKAHLRAISSREQVDRLLSTWYSSKPPLDLAASPGLCGGGLSHRAPTLA 333
            P+PP G DSG     +  + SR   D  L T  S+     L+A  G   GG       +A
Sbjct: 1665 PDPPPGTDSG-----IEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGAGAGVA 1719

Query: 334  LGTRL 338
             G  L
Sbjct: 1720 SGPEL 1724


>gi|166235171 solute carrier family 44, member 3 isoform 2 [Homo
           sapiens]
          Length = 605

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 9/70 (12%)

Query: 1   MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCLVH-YNALYGLGLLLTP 59
           +D    +     S  ++++ G+C+L  A+++ +  +F F    LVH + +L  LGL    
Sbjct: 150 VDTLHRILSGIMSGRDTIL-GLCILALALSLAMMFTFRFITTLLVHIFISLVILGL---- 204

Query: 60  PLALFLCGLL 69
              LF+CG+L
Sbjct: 205 ---LFVCGVL 211


>gi|30425506 transmembrane protein 52 [Homo sapiens]
          Length = 209

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 41 CPCLVHYNALYGLGLLLTPPLALFLCGLLA 70
          CP    +++L+ +GL+L   L L LCG+ A
Sbjct: 44 CPPQARWSSLWHVGLILLAVLLLLLCGVTA 73


>gi|111160385 UDP-GlcNAc:betaGal
           beta-1,3-N-acetylglucosaminyltransferase 9 [Homo
           sapiens]
          Length = 402

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 263 NAGRRLELPAVPEPPEGLDSGSGKAHLRAISSREQVDRLLSTWYSSKPPLDLAASPGLCG 322
           N G  LE  A  +P + L +G    H R I +R       S +Y  +    L A P   G
Sbjct: 235 NVGNLLEFLAPRDPAQDLLAGDVIVHARPIRTR------ASKYYIPEAVYGLPAYPAYAG 288

Query: 323 GG 324
           GG
Sbjct: 289 GG 290


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.139    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,920,952
Number of Sequences: 37866
Number of extensions: 626017
Number of successful extensions: 1969
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1954
Number of HSP's gapped (non-prelim): 13
length of query: 344
length of database: 18,247,518
effective HSP length: 103
effective length of query: 241
effective length of database: 14,347,320
effective search space: 3457704120
effective search space used: 3457704120
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.