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Search of human proteins with 191252797
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|191252797 dephospho-CoA kinase domain containing [Homo
sapiens]
(231 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|191252797 dephospho-CoA kinase domain containing [Homo sapiens] 457 e-129
gi|191252795 dephospho-CoA kinase domain containing [Homo sapiens] 457 e-129
gi|205277394 coenzyme A synthase isoform c [Homo sapiens] 99 2e-21
gi|110227607 coenzyme A synthase isoform b [Homo sapiens] 99 2e-21
gi|110227605 coenzyme A synthase isoform a [Homo sapiens] 99 2e-21
gi|110227601 coenzyme A synthase isoform a [Homo sapiens] 99 2e-21
gi|110227603 coenzyme A synthase isoform a [Homo sapiens] 99 2e-21
gi|38373677 guanine nucleotide-releasing factor 2 isoform b [Hom... 32 0.46
gi|38373675 guanine nucleotide-releasing factor 2 isoform a [Hom... 32 0.46
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa... 32 0.60
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s... 32 0.60
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s... 32 0.60
gi|18699734 uridine-cytidine kinase 2 [Homo sapiens] 31 1.0
gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens] 30 2.3
gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens] 30 2.3
gi|41281996 HEAT repeat containing 3 [Homo sapiens] 29 3.0
gi|63054822 calneuron 1 isoform 2 [Homo sapiens] 28 6.6
gi|157743275 calneuron 1 isoform 1 [Homo sapiens] 28 6.6
gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens] 28 6.6
gi|239755481 PREDICTED: similar to Putative uncharacterized prot... 28 8.7
gi|239744358 PREDICTED: hypothetical protein XP_002343105 [Homo ... 28 8.7
gi|108796056 TROVE domain family, member 2 isoform 1 [Homo sapiens] 28 8.7
gi|31377800 TROVE domain family, member 2 isoform 2 [Homo sapiens] 28 8.7
>gi|191252797 dephospho-CoA kinase domain containing [Homo sapiens]
Length = 231
Score = 457 bits (1175), Expect = e-129
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE
Sbjct: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
Query: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET
Sbjct: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
Query: 121 KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG 180
KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG
Sbjct: 121 KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG 180
Query: 181 EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA 231
EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA
Sbjct: 181 EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA 231
>gi|191252795 dephospho-CoA kinase domain containing [Homo sapiens]
Length = 231
Score = 457 bits (1175), Expect = e-129
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE
Sbjct: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
Query: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET
Sbjct: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
Query: 121 KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG 180
KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG
Sbjct: 121 KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG 180
Query: 181 EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA 231
EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA
Sbjct: 181 EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA 231
>gi|205277394 coenzyme A synthase isoform c [Homo sapiens]
Length = 593
Score = 99.4 bits (246), Expect = 2e-21
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
++++GLTG SGKSS+ Q + LG VID D + PG PA++ +VE FGT++L +
Sbjct: 387 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 446
Query: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
+G INRKVLG +F + ++L I P I K +E + G R ++D +L E
Sbjct: 447 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 506
Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
+ + H V +T+ + R++ R+ L+ A++R+ +Q+ + VL
Sbjct: 507 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 564
Query: 180 GEWSVTKRQV 189
E +T+RQV
Sbjct: 565 WEPHITQRQV 574
>gi|110227607 coenzyme A synthase isoform b [Homo sapiens]
Length = 269
Score = 99.4 bits (246), Expect = 2e-21
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
++++GLTG SGKSS+ Q + LG VID D + PG PA++ +VE FGT++L +
Sbjct: 63 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 122
Query: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
+G INRKVLG +F + ++L I P I K +E + G R ++D +L E
Sbjct: 123 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 182
Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
+ + H V +T+ + R++ R+ L+ A++R+ +Q+ + VL
Sbjct: 183 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 240
Query: 180 GEWSVTKRQV 189
E +T+RQV
Sbjct: 241 WEPHITQRQV 250
>gi|110227605 coenzyme A synthase isoform a [Homo sapiens]
Length = 564
Score = 99.4 bits (246), Expect = 2e-21
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
++++GLTG SGKSS+ Q + LG VID D + PG PA++ +VE FGT++L +
Sbjct: 358 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 417
Query: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
+G INRKVLG +F + ++L I P I K +E + G R ++D +L E
Sbjct: 418 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 477
Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
+ + H V +T+ + R++ R+ L+ A++R+ +Q+ + VL
Sbjct: 478 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535
Query: 180 GEWSVTKRQV 189
E +T+RQV
Sbjct: 536 WEPHITQRQV 545
>gi|110227601 coenzyme A synthase isoform a [Homo sapiens]
Length = 564
Score = 99.4 bits (246), Expect = 2e-21
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
++++GLTG SGKSS+ Q + LG VID D + PG PA++ +VE FGT++L +
Sbjct: 358 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 417
Query: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
+G INRKVLG +F + ++L I P I K +E + G R ++D +L E
Sbjct: 418 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 477
Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
+ + H V +T+ + R++ R+ L+ A++R+ +Q+ + VL
Sbjct: 478 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535
Query: 180 GEWSVTKRQV 189
E +T+RQV
Sbjct: 536 WEPHITQRQV 545
>gi|110227603 coenzyme A synthase isoform a [Homo sapiens]
Length = 564
Score = 99.4 bits (246), Expect = 2e-21
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 1 MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
++++GLTG SGKSS+ Q + LG VID D + PG PA++ +VE FGT++L +
Sbjct: 358 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 417
Query: 61 NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
+G INRKVLG +F + ++L I P I K +E + G R ++D +L E
Sbjct: 418 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 477
Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
+ + H V +T+ + R++ R+ L+ A++R+ +Q+ + VL
Sbjct: 478 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535
Query: 180 GEWSVTKRQV 189
E +T+RQV
Sbjct: 536 WEPHITQRQV 545
>gi|38373677 guanine nucleotide-releasing factor 2 isoform b [Homo
sapiens]
Length = 1095
Score = 32.0 bits (71), Expect = 0.46
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 92 RKEMMKETFKYFLRGYRYVILDIPLLFETKKLLKYMKHTVV-VYCDRDTQLARLMRRNSL 150
+K + K TF +R V+ ++ L+ T+++LK + V + C+ + LAR++R+N L
Sbjct: 769 KKRVSKNTFFVLVR----VVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNIL 824
Query: 151 NRKDAEARI---NAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLE 201
++ D + + + PL + AR + Q+ LL EL +E
Sbjct: 825 DKVDQKKLLRCATSSQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIE 878
>gi|38373675 guanine nucleotide-releasing factor 2 isoform a [Homo
sapiens]
Length = 1077
Score = 32.0 bits (71), Expect = 0.46
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 92 RKEMMKETFKYFLRGYRYVILDIPLLFETKKLLKYMKHTVV-VYCDRDTQLARLMRRNSL 150
+K + K TF +R V+ ++ L+ T+++LK + V + C+ + LAR++R+N L
Sbjct: 751 KKRVSKNTFFVLVR----VVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNIL 806
Query: 151 NRKDAEARI---NAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLE 201
++ D + + + PL + AR + Q+ LL EL +E
Sbjct: 807 DKVDQKKLLRCATSSQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIE 860
>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
sapiens]
Length = 395
Score = 31.6 bits (70), Expect = 0.60
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 148 NSLNRKDAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLEYLPLRF 207
+SL +K+ + + + QL + KA+ D G+ + ++ + LH EL SLE L F
Sbjct: 34 DSLEQKETQEQTSGQLVMLRKAQEFFQTCDAEGKGFIARKDMQRLHKELPLSLEELEDVF 93
Query: 208 GVL 210
L
Sbjct: 94 DAL 96
>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
sapiens]
Length = 462
Score = 31.6 bits (70), Expect = 0.60
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 148 NSLNRKDAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLEYLPLRF 207
+SL +K+ + + + QL + KA+ D G+ + ++ + LH EL SLE L F
Sbjct: 34 DSLEQKETQEQTSGQLVMLRKAQEFFQTCDAEGKGFIARKDMQRLHKELPLSLEELEDVF 93
Query: 208 GVL 210
L
Sbjct: 94 DAL 96
>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
sapiens]
Length = 731
Score = 31.6 bits (70), Expect = 0.60
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 148 NSLNRKDAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLEYLPLRF 207
+SL +K+ + + + QL + KA+ D G+ + ++ + LH EL SLE L F
Sbjct: 34 DSLEQKETQEQTSGQLVMLRKAQEFFQTCDAEGKGFIARKDMQRLHKELPLSLEELEDVF 93
Query: 208 GVL 210
L
Sbjct: 94 DAL 96
>gi|18699734 uridine-cytidine kinase 2 [Homo sapiens]
Length = 261
Score = 30.8 bits (68), Expect = 1.0
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 2 FLVGLTGGIASGKSSV-IQVFQQLGCAVID 30
FL+G++GG ASGKSSV ++ Q LG +D
Sbjct: 21 FLIGVSGGTASGKSSVCAKIVQLLGQNEVD 50
>gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens]
Length = 201
Score = 29.6 bits (65), Expect = 2.3
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 2 FLVGLTGGIASGKSSVIQVFQQL 24
FL+G++GG ASGKS+V + +L
Sbjct: 24 FLIGVSGGTASGKSTVCEKIMEL 46
>gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens]
Length = 277
Score = 29.6 bits (65), Expect = 2.3
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 2 FLVGLTGGIASGKSSVIQVFQQL 24
FL+G++GG ASGKS+V + +L
Sbjct: 24 FLIGVSGGTASGKSTVCEKIMEL 46
>gi|41281996 HEAT repeat containing 3 [Homo sapiens]
Length = 680
Score = 29.3 bits (64), Expect = 3.0
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 3 LVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLENG 62
++G+TG + + + ++ + +GC +++V +V G A + +VF E
Sbjct: 562 ILGITGSVLAKEDGTLETLKNIGCFLLEVTTKDPSLVVAG-EALDALFDVFADGKEAERA 620
Query: 63 DINRKVLGDLIFNQP 77
I K+L L QP
Sbjct: 621 SIQIKLLSALKEFQP 635
>gi|63054822 calneuron 1 isoform 2 [Homo sapiens]
Length = 219
Score = 28.1 bits (61), Expect = 6.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 144 LMRRNSLNRK-----DAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELER 198
L + N LNR D+E N + D+ R A VLD G ++K+++ + R
Sbjct: 11 LYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGM----AMR 66
Query: 199 SLEYLP 204
SL Y+P
Sbjct: 67 SLGYMP 72
>gi|157743275 calneuron 1 isoform 1 [Homo sapiens]
Length = 261
Score = 28.1 bits (61), Expect = 6.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 144 LMRRNSLNRK-----DAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELER 198
L + N LNR D+E N + D+ R A VLD G ++K+++ + R
Sbjct: 53 LYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGM----AMR 108
Query: 199 SLEYLP 204
SL Y+P
Sbjct: 109 SLGYMP 114
>gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens]
Length = 894
Score = 28.1 bits (61), Expect = 6.6
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 175 VLDNSGEWSVTKRQVILLHTELERS----LEYLPLRFGVLTGLAAIASLLYLLTHY 226
++++ EWS+ K+ + L ++ +S L Y + FG+ G A + + HY
Sbjct: 789 IMESDEEWSMNKKLIDLSSKDIRKSVPRGLPYFSVDFGLHGGFAHVIEDQHKFPHY 844
>gi|239755481 PREDICTED: similar to Putative uncharacterized protein
ENSP00000334305 [Homo sapiens]
Length = 771
Score = 27.7 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 5 GLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAH 46
G GG+ + + +QV +L C + + R V+ PGYP H
Sbjct: 569 GFQGGVLTARLFKMQVSLELFCGHQE-HYLTRPVLAPGYPVH 609
>gi|239744358 PREDICTED: hypothetical protein XP_002343105 [Homo
sapiens]
Length = 767
Score = 27.7 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 5 GLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAH 46
G GG+ + + +QV +L C + + R V+ PGYP H
Sbjct: 565 GFQGGVLTARLFKMQVSLELFCGHQE-HYLTRPVLAPGYPVH 605
>gi|108796056 TROVE domain family, member 2 isoform 1 [Homo sapiens]
Length = 525
Score = 27.7 bits (60), Expect = 8.7
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 86 ITHPEIRKEMMKETFKYFLRGYRYV---ILDIPLLFETKKLLKYMKHTVVVYCDRD---- 138
++H + E + KY +G++ V + L ET+KLLKY++ V RD
Sbjct: 185 LSHLKPSSEGLAIVTKYITKGWKEVHELYKEKALSVETEKLLKYLEAVEKVKRTRDELEV 244
Query: 139 ---TQLARLMRR----NSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
+ RL+R N L K+ + ++PLT R + NS
Sbjct: 245 IHLIEEHRLVREHLLTNHLKSKEVWKALLQEMPLTALLRNLGKMTANS 292
>gi|31377800 TROVE domain family, member 2 isoform 2 [Homo sapiens]
Length = 538
Score = 27.7 bits (60), Expect = 8.7
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 86 ITHPEIRKEMMKETFKYFLRGYRYV---ILDIPLLFETKKLLKYMKHTVVVYCDRD---- 138
++H + E + KY +G++ V + L ET+KLLKY++ V RD
Sbjct: 185 LSHLKPSSEGLAIVTKYITKGWKEVHELYKEKALSVETEKLLKYLEAVEKVKRTRDELEV 244
Query: 139 ---TQLARLMRR----NSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
+ RL+R N L K+ + ++PLT R + NS
Sbjct: 245 IHLIEEHRLVREHLLTNHLKSKEVWKALLQEMPLTALLRNLGKMTANS 292
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.141 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,507,965
Number of Sequences: 37866
Number of extensions: 287305
Number of successful extensions: 885
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 872
Number of HSP's gapped (non-prelim): 23
length of query: 231
length of database: 18,247,518
effective HSP length: 99
effective length of query: 132
effective length of database: 14,498,784
effective search space: 1913839488
effective search space used: 1913839488
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.