Guide to the Human Genome
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Search of human proteins with 191252797

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|191252797 dephospho-CoA kinase domain containing [Homo
sapiens]
         (231 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|191252797 dephospho-CoA kinase domain containing [Homo sapiens]    457   e-129
gi|191252795 dephospho-CoA kinase domain containing [Homo sapiens]    457   e-129
gi|205277394 coenzyme A synthase isoform c [Homo sapiens]              99   2e-21
gi|110227607 coenzyme A synthase isoform b [Homo sapiens]              99   2e-21
gi|110227605 coenzyme A synthase isoform a [Homo sapiens]              99   2e-21
gi|110227601 coenzyme A synthase isoform a [Homo sapiens]              99   2e-21
gi|110227603 coenzyme A synthase isoform a [Homo sapiens]              99   2e-21
gi|38373677 guanine nucleotide-releasing factor 2 isoform b [Hom...    32   0.46 
gi|38373675 guanine nucleotide-releasing factor 2 isoform a [Hom...    32   0.46 
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa...    32   0.60 
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s...    32   0.60 
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s...    32   0.60 
gi|18699734 uridine-cytidine kinase 2 [Homo sapiens]                   31   1.0  
gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens]        30   2.3  
gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens]         30   2.3  
gi|41281996 HEAT repeat containing 3 [Homo sapiens]                    29   3.0  
gi|63054822 calneuron 1 isoform 2 [Homo sapiens]                       28   6.6  
gi|157743275 calneuron 1 isoform 1 [Homo sapiens]                      28   6.6  
gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens]           28   6.6  
gi|239755481 PREDICTED: similar to Putative uncharacterized prot...    28   8.7  
gi|239744358 PREDICTED: hypothetical protein XP_002343105 [Homo ...    28   8.7  
gi|108796056 TROVE domain family, member 2 isoform 1 [Homo sapiens]    28   8.7  
gi|31377800 TROVE domain family, member 2 isoform 2 [Homo sapiens]     28   8.7  

>gi|191252797 dephospho-CoA kinase domain containing [Homo sapiens]
          Length = 231

 Score =  457 bits (1175), Expect = e-129
 Identities = 231/231 (100%), Positives = 231/231 (100%)

Query: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
           MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE
Sbjct: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60

Query: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
           NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET
Sbjct: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120

Query: 121 KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG 180
           KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG
Sbjct: 121 KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG 180

Query: 181 EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA 231
           EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA
Sbjct: 181 EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA 231


>gi|191252795 dephospho-CoA kinase domain containing [Homo sapiens]
          Length = 231

 Score =  457 bits (1175), Expect = e-129
 Identities = 231/231 (100%), Positives = 231/231 (100%)

Query: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
           MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE
Sbjct: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60

Query: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
           NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET
Sbjct: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120

Query: 121 KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG 180
           KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG
Sbjct: 121 KKLLKYMKHTVVVYCDRDTQLARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNSG 180

Query: 181 EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA 231
           EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA
Sbjct: 181 EWSVTKRQVILLHTELERSLEYLPLRFGVLTGLAAIASLLYLLTHYLLPYA 231


>gi|205277394 coenzyme A synthase isoform c [Homo sapiens]
          Length = 593

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)

Query: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
           ++++GLTG   SGKSS+ Q  + LG  VID D +      PG PA++ +VE FGT++L +
Sbjct: 387 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 446

Query: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
           +G INRKVLG  +F    + ++L  I  P I K   +E  +    G R  ++D  +L E 
Sbjct: 447 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 506

Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
               + + H V      +T+ + R++ R+ L+   A++R+ +Q+        +  VL   
Sbjct: 507 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 564

Query: 180 GEWSVTKRQV 189
            E  +T+RQV
Sbjct: 565 WEPHITQRQV 574


>gi|110227607 coenzyme A synthase isoform b [Homo sapiens]
          Length = 269

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)

Query: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
           ++++GLTG   SGKSS+ Q  + LG  VID D +      PG PA++ +VE FGT++L +
Sbjct: 63  LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 122

Query: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
           +G INRKVLG  +F    + ++L  I  P I K   +E  +    G R  ++D  +L E 
Sbjct: 123 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 182

Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
               + + H V      +T+ + R++ R+ L+   A++R+ +Q+        +  VL   
Sbjct: 183 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 240

Query: 180 GEWSVTKRQV 189
            E  +T+RQV
Sbjct: 241 WEPHITQRQV 250


>gi|110227605 coenzyme A synthase isoform a [Homo sapiens]
          Length = 564

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)

Query: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
           ++++GLTG   SGKSS+ Q  + LG  VID D +      PG PA++ +VE FGT++L +
Sbjct: 358 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 417

Query: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
           +G INRKVLG  +F    + ++L  I  P I K   +E  +    G R  ++D  +L E 
Sbjct: 418 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 477

Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
               + + H V      +T+ + R++ R+ L+   A++R+ +Q+        +  VL   
Sbjct: 478 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535

Query: 180 GEWSVTKRQV 189
            E  +T+RQV
Sbjct: 536 WEPHITQRQV 545


>gi|110227601 coenzyme A synthase isoform a [Homo sapiens]
          Length = 564

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)

Query: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
           ++++GLTG   SGKSS+ Q  + LG  VID D +      PG PA++ +VE FGT++L +
Sbjct: 358 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 417

Query: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
           +G INRKVLG  +F    + ++L  I  P I K   +E  +    G R  ++D  +L E 
Sbjct: 418 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 477

Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
               + + H V      +T+ + R++ R+ L+   A++R+ +Q+        +  VL   
Sbjct: 478 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535

Query: 180 GEWSVTKRQV 189
            E  +T+RQV
Sbjct: 536 WEPHITQRQV 545


>gi|110227603 coenzyme A synthase isoform a [Homo sapiens]
          Length = 564

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 3/190 (1%)

Query: 1   MFLVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLE 60
           ++++GLTG   SGKSS+ Q  + LG  VID D +      PG PA++ +VE FGT++L +
Sbjct: 358 LYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHK 417

Query: 61  NGDINRKVLGDLIFNQPDRRQLLNAITHPEIRKEMMKETFKYFLRGYRYVILDIPLLFET 120
           +G INRKVLG  +F    + ++L  I  P I K   +E  +    G R  ++D  +L E 
Sbjct: 418 DGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEA 477

Query: 121 KKLLKYMKHTVVVYCDRDTQ-LARLMRRNSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
               + + H V      +T+ + R++ R+ L+   A++R+ +Q+        +  VL   
Sbjct: 478 G--WQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTL 535

Query: 180 GEWSVTKRQV 189
            E  +T+RQV
Sbjct: 536 WEPHITQRQV 545


>gi|38373677 guanine nucleotide-releasing factor 2 isoform b [Homo
           sapiens]
          Length = 1095

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 8/114 (7%)

Query: 92  RKEMMKETFKYFLRGYRYVILDIPLLFETKKLLKYMKHTVV-VYCDRDTQLARLMRRNSL 150
           +K + K TF   +R    V+ ++ L+  T+++LK +   V  + C+ +  LAR++R+N L
Sbjct: 769 KKRVSKNTFFVLVR----VVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNIL 824

Query: 151 NRKDAEARI---NAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLE 201
           ++ D +  +    +  PL  +   AR    +         Q+ LL  EL   +E
Sbjct: 825 DKVDQKKLLRCATSSQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIE 878


>gi|38373675 guanine nucleotide-releasing factor 2 isoform a [Homo
           sapiens]
          Length = 1077

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 8/114 (7%)

Query: 92  RKEMMKETFKYFLRGYRYVILDIPLLFETKKLLKYMKHTVV-VYCDRDTQLARLMRRNSL 150
           +K + K TF   +R    V+ ++ L+  T+++LK +   V  + C+ +  LAR++R+N L
Sbjct: 751 KKRVSKNTFFVLVR----VVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNIL 806

Query: 151 NRKDAEARI---NAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLE 201
           ++ D +  +    +  PL  +   AR    +         Q+ LL  EL   +E
Sbjct: 807 DKVDQKKLLRCATSSQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIE 860


>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
           sapiens]
          Length = 395

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 148 NSLNRKDAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLEYLPLRF 207
           +SL +K+ + + + QL +  KA+      D  G+  + ++ +  LH EL  SLE L   F
Sbjct: 34  DSLEQKETQEQTSGQLVMLRKAQEFFQTCDAEGKGFIARKDMQRLHKELPLSLEELEDVF 93

Query: 208 GVL 210
             L
Sbjct: 94  DAL 96


>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
           sapiens]
          Length = 462

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 148 NSLNRKDAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLEYLPLRF 207
           +SL +K+ + + + QL +  KA+      D  G+  + ++ +  LH EL  SLE L   F
Sbjct: 34  DSLEQKETQEQTSGQLVMLRKAQEFFQTCDAEGKGFIARKDMQRLHKELPLSLEELEDVF 93

Query: 208 GVL 210
             L
Sbjct: 94  DAL 96


>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
           sapiens]
          Length = 731

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 148 NSLNRKDAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELERSLEYLPLRF 207
           +SL +K+ + + + QL +  KA+      D  G+  + ++ +  LH EL  SLE L   F
Sbjct: 34  DSLEQKETQEQTSGQLVMLRKAQEFFQTCDAEGKGFIARKDMQRLHKELPLSLEELEDVF 93

Query: 208 GVL 210
             L
Sbjct: 94  DAL 96


>gi|18699734 uridine-cytidine kinase 2 [Homo sapiens]
          Length = 261

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)

Query: 2  FLVGLTGGIASGKSSV-IQVFQQLGCAVID 30
          FL+G++GG ASGKSSV  ++ Q LG   +D
Sbjct: 21 FLIGVSGGTASGKSSVCAKIVQLLGQNEVD 50


>gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens]
          Length = 201

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 12/23 (52%), Positives = 18/23 (78%)

Query: 2  FLVGLTGGIASGKSSVIQVFQQL 24
          FL+G++GG ASGKS+V +   +L
Sbjct: 24 FLIGVSGGTASGKSTVCEKIMEL 46


>gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens]
          Length = 277

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 12/23 (52%), Positives = 18/23 (78%)

Query: 2  FLVGLTGGIASGKSSVIQVFQQL 24
          FL+G++GG ASGKS+V +   +L
Sbjct: 24 FLIGVSGGTASGKSTVCEKIMEL 46


>gi|41281996 HEAT repeat containing 3 [Homo sapiens]
          Length = 680

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 3   LVGLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVFGTEVLLENG 62
           ++G+TG + + +   ++  + +GC +++V      +V  G  A   + +VF      E  
Sbjct: 562 ILGITGSVLAKEDGTLETLKNIGCFLLEVTTKDPSLVVAG-EALDALFDVFADGKEAERA 620

Query: 63  DINRKVLGDLIFNQP 77
            I  K+L  L   QP
Sbjct: 621 SIQIKLLSALKEFQP 635


>gi|63054822 calneuron 1 isoform 2 [Homo sapiens]
          Length = 219

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)

Query: 144 LMRRNSLNRK-----DAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELER 198
           L + N LNR      D+E   N  +   D+ R A  VLD  G   ++K+++ +      R
Sbjct: 11  LYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGM----AMR 66

Query: 199 SLEYLP 204
           SL Y+P
Sbjct: 67  SLGYMP 72


>gi|157743275 calneuron 1 isoform 1 [Homo sapiens]
          Length = 261

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)

Query: 144 LMRRNSLNRK-----DAEARINAQLPLTDKARMARHVLDNSGEWSVTKRQVILLHTELER 198
           L + N LNR      D+E   N  +   D+ R A  VLD  G   ++K+++ +      R
Sbjct: 53  LYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGM----AMR 108

Query: 199 SLEYLP 204
           SL Y+P
Sbjct: 109 SLGYMP 114


>gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens]
          Length = 894

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 175 VLDNSGEWSVTKRQVILLHTELERS----LEYLPLRFGVLTGLAAIASLLYLLTHY 226
           ++++  EWS+ K+ + L   ++ +S    L Y  + FG+  G A +    +   HY
Sbjct: 789 IMESDEEWSMNKKLIDLSSKDIRKSVPRGLPYFSVDFGLHGGFAHVIEDQHKFPHY 844


>gi|239755481 PREDICTED: similar to Putative uncharacterized protein
           ENSP00000334305 [Homo sapiens]
          Length = 771

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 5   GLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAH 46
           G  GG+ + +   +QV  +L C   +   + R V+ PGYP H
Sbjct: 569 GFQGGVLTARLFKMQVSLELFCGHQE-HYLTRPVLAPGYPVH 609


>gi|239744358 PREDICTED: hypothetical protein XP_002343105 [Homo
           sapiens]
          Length = 767

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 5   GLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAH 46
           G  GG+ + +   +QV  +L C   +   + R V+ PGYP H
Sbjct: 565 GFQGGVLTARLFKMQVSLELFCGHQE-HYLTRPVLAPGYPVH 605


>gi|108796056 TROVE domain family, member 2 isoform 1 [Homo sapiens]
          Length = 525

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)

Query: 86  ITHPEIRKEMMKETFKYFLRGYRYV---ILDIPLLFETKKLLKYMKHTVVVYCDRD---- 138
           ++H +   E +    KY  +G++ V     +  L  ET+KLLKY++    V   RD    
Sbjct: 185 LSHLKPSSEGLAIVTKYITKGWKEVHELYKEKALSVETEKLLKYLEAVEKVKRTRDELEV 244

Query: 139 ---TQLARLMRR----NSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
               +  RL+R     N L  K+    +  ++PLT   R    +  NS
Sbjct: 245 IHLIEEHRLVREHLLTNHLKSKEVWKALLQEMPLTALLRNLGKMTANS 292


>gi|31377800 TROVE domain family, member 2 isoform 2 [Homo sapiens]
          Length = 538

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)

Query: 86  ITHPEIRKEMMKETFKYFLRGYRYV---ILDIPLLFETKKLLKYMKHTVVVYCDRD---- 138
           ++H +   E +    KY  +G++ V     +  L  ET+KLLKY++    V   RD    
Sbjct: 185 LSHLKPSSEGLAIVTKYITKGWKEVHELYKEKALSVETEKLLKYLEAVEKVKRTRDELEV 244

Query: 139 ---TQLARLMRR----NSLNRKDAEARINAQLPLTDKARMARHVLDNS 179
               +  RL+R     N L  K+    +  ++PLT   R    +  NS
Sbjct: 245 IHLIEEHRLVREHLLTNHLKSKEVWKALLQEMPLTALLRNLGKMTANS 292


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.141    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,507,965
Number of Sequences: 37866
Number of extensions: 287305
Number of successful extensions: 885
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 872
Number of HSP's gapped (non-prelim): 23
length of query: 231
length of database: 18,247,518
effective HSP length: 99
effective length of query: 132
effective length of database: 14,498,784
effective search space: 1913839488
effective search space used: 1913839488
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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