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Search of human proteins with 189571621
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|189571621 HRAS-like suppressor 3 [Homo sapiens]
(162 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189571621 HRAS-like suppressor 3 [Homo sapiens] 325 1e-89
gi|189571618 HRAS-like suppressor 3 [Homo sapiens] 325 1e-89
gi|8923526 HRAS-like suppressor 2 [Homo sapiens] 223 6e-59
gi|149588791 retinoic acid receptor responder (tazarotene induce... 165 1e-41
gi|9966859 HRAS-like suppressor [Homo sapiens] 148 2e-36
gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Hom... 138 2e-33
gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Ho... 138 2e-33
gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Ho... 108 3e-24
gi|46249410 lecithin retinol acyltransferase [Homo sapiens] 55 3e-08
gi|28557798 family with sequence similarity 84, member B [Homo s... 43 1e-04
gi|21553329 family with sequence similarity 84, member A [Homo s... 34 0.048
gi|7949031 cytochrome P450, family 2, subfamily B, polypeptide 6... 31 0.41
gi|58218986 thymocyte selection pathway associated [Homo sapiens] 30 1.2
gi|217416343 fibrosin-like 1 [Homo sapiens] 27 5.9
gi|166795283 glucagon-like peptide 1 receptor [Homo sapiens] 27 7.7
gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens] 27 7.7
>gi|189571621 HRAS-like suppressor 3 [Homo sapiens]
Length = 162
Score = 325 bits (833), Expect = 1e-89
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60
MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV
Sbjct: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60
Query: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120
KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL
Sbjct: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120
Query: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162
RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ
Sbjct: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162
>gi|189571618 HRAS-like suppressor 3 [Homo sapiens]
Length = 162
Score = 325 bits (833), Expect = 1e-89
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60
MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV
Sbjct: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60
Query: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120
KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL
Sbjct: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120
Query: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162
RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ
Sbjct: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162
>gi|8923526 HRAS-like suppressor 2 [Homo sapiens]
Length = 162
Score = 223 bits (568), Expect = 6e-59
Identities = 109/157 (69%), Positives = 130/157 (82%)
Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65
P P+ GDLIEI R Y HWAIYVGDGYVVHLAP SE+AGAGAASV+SALT+KAIVKKELL
Sbjct: 6 PRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVKKELL 65
Query: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125
VAG D Y+VNNKHDD+Y+PLP +KI++RAEELVGQE+ Y LTS+NCEHFVN LRYGV+
Sbjct: 66 SVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYGVS 125
Query: 126 RSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162
RSDQV + VA LAA SL+G++ +R+KR++Q
Sbjct: 126 RSDQVTGAVTTVGVAAGLLAAASLVGILLARSKRERQ 162
>gi|149588791 retinoic acid receptor responder (tazarotene induced)
3 [Homo sapiens]
Length = 164
Score = 165 bits (418), Expect = 1e-41
Identities = 83/162 (51%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60
M +P EPKPGDLIEIFR Y HWA+Y+GDGYV+HLAPPSE GAG++SV S L++ A V
Sbjct: 1 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60
Query: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120
K+E L DV G Y+VNN D +Y P P II A+E+VGQ++ Y + S NCEHFV +L
Sbjct: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120
Query: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162
RYG +R QV + VA L + + G F+ + QK+
Sbjct: 121 RYGKSRCKQVEKAKVEVGVA-TALGILVVAGCSFAIRRYQKK 161
>gi|9966859 HRAS-like suppressor [Homo sapiens]
Length = 168
Score = 148 bits (374), Expect = 2e-36
Identities = 72/154 (46%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Query: 8 PKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYD 67
P PGDLIE+FRP Y+HWA+Y+GDGYV+++AP + A S S + KA+VK +LL D
Sbjct: 15 PCPGDLIEVFRPGYQHWALYLGDGYVINIAPVDGIP-ASFTSAKSVFSSKALVKMQLLKD 73
Query: 68 VAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVARS 127
V G+D Y++NNK+D+ Y PLP +II+R+E ++GQEV Y L NCEHFV LRYG S
Sbjct: 74 VVGNDTYRINNKYDETYPPLPVEEIIKRSEFVIGQEVAYNLLVNNCEHFVTLLRYGEGVS 133
Query: 128 DQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQK 161
+Q I + S +G +F + +R K
Sbjct: 134 EQANRAISTVEFVTAAVGVFSFLG-LFPKGQRAK 166
>gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Homo
sapiens]
Length = 279
Score = 138 bits (347), Expect = 2e-33
Identities = 75/143 (52%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65
P P+PGDLIEIFR Y HWAIYV D VVHLAPPSE G S+ S +++A+VK L
Sbjct: 128 PRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRL 185
Query: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125
DV ++VNNK D Y PLP KIIQR +++V + V Y L NCEHFVN LRYGV
Sbjct: 186 EDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVP 245
Query: 126 RSDQVRDVII-AASVAGMGLAAM 147
RS QV ++ A AG ++A+
Sbjct: 246 RSQQVEHALMEGAKAAGAVISAV 268
>gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Homo
sapiens]
Length = 269
Score = 138 bits (347), Expect = 2e-33
Identities = 75/143 (52%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65
P P+PGDLIEIFR Y HWAIYV D VVHLAPPSE G S+ S +++A+VK L
Sbjct: 118 PRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRL 175
Query: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125
DV ++VNNK D Y PLP KIIQR +++V + V Y L NCEHFVN LRYGV
Sbjct: 176 EDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVP 235
Query: 126 RSDQVRDVII-AASVAGMGLAAM 147
RS QV ++ A AG ++A+
Sbjct: 236 RSQQVEHALMEGAKAAGAVISAV 258
>gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Homo
sapiens]
Length = 253
Score = 108 bits (269), Expect = 3e-24
Identities = 57/108 (52%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65
P P+PGDLIEIFR Y HWAIYV D VVHLAPPSE G S+ S +++A+VK L
Sbjct: 128 PRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRL 185
Query: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENC 113
DV ++VNNK D Y PLP KIIQR +++V + V Y L NC
Sbjct: 186 EDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNC 233
>gi|46249410 lecithin retinol acyltransferase [Homo sapiens]
Length = 230
Score = 54.7 bits (130), Expect = 3e-08
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 24/166 (14%)
Query: 11 GDLIEIFRPFYRHWAIYVGDGYVVHLAPP-----------SEVAGAGAASVMSALTDKAI 59
GD++E+ R H+ IY+GD V H+ P ++ + ++ + A
Sbjct: 48 GDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDMGRTQKVVSNKRLILGVIVKVAS 107
Query: 60 VKKELLYDVAGSDKYQVNNKHDD-KYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVN 118
++ + + D A VN+ + + L ++ +RAE+L+G Y L NCEHFV
Sbjct: 108 IRVDTVEDFAYGANILVNHLDESLQKKALLNEEVARRAEKLLG-FTPYSLLWNNCEHFVT 166
Query: 119 ELRYGVARSDQ-----------VRDVIIAASVAGMGLAAMSLIGVM 153
RYG S Q +RD + A +GLA++ G++
Sbjct: 167 YCRYGTPISPQSDKFCETVKIIIRDQRSVLASAVLGLASIVCTGLV 212
>gi|28557798 family with sequence similarity 84, member B [Homo
sapiens]
Length = 310
Score = 43.1 bits (100), Expect = 1e-04
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 9 KPGDLIE-IFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYD 67
KPGDL+E + + Y HWA+YVG+ VVHL + S LTD +
Sbjct: 117 KPGDLVEFVSQAQYPHWAVYVGNFQVVHL--------HRLEVINSFLTDAS--------- 159
Query: 68 VAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYG 123
G VN+ + +Y PL S +++ A VG + +L+ N E F RYG
Sbjct: 160 -QGRRGRVVNDLY--RYKPLSSSAVVRNALAHVGAKE-RELSWRNSESFAAWCRYG 211
>gi|21553329 family with sequence similarity 84, member A [Homo
sapiens]
Length = 292
Score = 34.3 bits (77), Expect = 0.048
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 29/123 (23%)
Query: 9 KPGDLIEIF--RPFYR------HWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60
+PGDL+E+ +P HWA+YVG G ++HL + +
Sbjct: 121 EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHL-------------------HQGEI 161
Query: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120
+++ LY+ ++ +V N +Y PL ++Q A +G + ++ N E F
Sbjct: 162 RQDSLYEAGAANVGRVVNSW-YRYRPLVAELVVQNACGHLGLK-SEEICWTNSESFAAWC 219
Query: 121 RYG 123
R+G
Sbjct: 220 RFG 222
>gi|7949031 cytochrome P450, family 2, subfamily B, polypeptide 6
[Homo sapiens]
Length = 491
Score = 31.2 bits (69), Expect = 0.41
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 4 PIPEPKPGDLIE-----IFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKA 58
P P P G+L++ + + F R Y GD + VHL P V G ++ AL DKA
Sbjct: 34 PRPLPLLGNLLQMDRRGLLKSFLRFREKY-GDVFTVHLGPRPVVMLCGVEAIREALVDKA 92
>gi|58218986 thymocyte selection pathway associated [Homo sapiens]
Length = 641
Score = 29.6 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 25 AIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSDKYQ----VNNKH 80
++ VGD ++VH + +EV G V++ L + I+KK Y+ A Y V H
Sbjct: 382 SVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKS--YEAALLPLYMEGGFVEVIH 439
Query: 81 DDKYSPL 87
D K P+
Sbjct: 440 DKKQYPI 446
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 27.3 bits (59), Expect = 5.9
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 42 VAGAG-AASVMSALTDKAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELV 100
V+G G + S DKA V E L+ G+DK K + K P+P ++R+ EL
Sbjct: 199 VSGRGYSCDSESGPDDKASVGSEKLF-APGTDKGPALEKSEAKAGPVPKVSGLERSRELS 257
Query: 101 GQEVL 105
+ L
Sbjct: 258 AESFL 262
>gi|166795283 glucagon-like peptide 1 receptor [Homo sapiens]
Length = 463
Score = 26.9 bits (58), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYV 33
P+ +PG + + P+Y WA V G+V
Sbjct: 73 PDGEPGSFVNVSCPWYLPWASSVPQGHV 100
>gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens]
Length = 908
Score = 26.9 bits (58), Expect = 7.7
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 40 SEVAGAGAASVMSALTD--KAIVKKE--LLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQR 95
S+VA AG +V+ + D I+ K +LY + + + ++ D++ PLP S + +
Sbjct: 789 SQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQ 848
Query: 96 AEELVGQ 102
A ++VGQ
Sbjct: 849 AVDVVGQ 855
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,054,243
Number of Sequences: 37866
Number of extensions: 251813
Number of successful extensions: 545
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 526
Number of HSP's gapped (non-prelim): 16
length of query: 162
length of database: 18,247,518
effective HSP length: 94
effective length of query: 68
effective length of database: 14,688,114
effective search space: 998791752
effective search space used: 998791752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.