BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|189571618 HRAS-like suppressor 3 [Homo sapiens] (162 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|189571621 HRAS-like suppressor 3 [Homo sapiens] 325 1e-89 gi|189571618 HRAS-like suppressor 3 [Homo sapiens] 325 1e-89 gi|8923526 HRAS-like suppressor 2 [Homo sapiens] 223 6e-59 gi|149588791 retinoic acid receptor responder (tazarotene induce... 165 1e-41 gi|9966859 HRAS-like suppressor [Homo sapiens] 148 2e-36 gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Hom... 138 2e-33 gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Ho... 138 2e-33 gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Ho... 108 3e-24 gi|46249410 lecithin retinol acyltransferase [Homo sapiens] 55 3e-08 gi|28557798 family with sequence similarity 84, member B [Homo s... 43 1e-04 gi|21553329 family with sequence similarity 84, member A [Homo s... 34 0.048 gi|7949031 cytochrome P450, family 2, subfamily B, polypeptide 6... 31 0.41 gi|58218986 thymocyte selection pathway associated [Homo sapiens] 30 1.2 gi|217416343 fibrosin-like 1 [Homo sapiens] 27 5.9 gi|166795283 glucagon-like peptide 1 receptor [Homo sapiens] 27 7.7 gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens] 27 7.7 >gi|189571621 HRAS-like suppressor 3 [Homo sapiens] Length = 162 Score = 325 bits (833), Expect = 1e-89 Identities = 162/162 (100%), Positives = 162/162 (100%) Query: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV Sbjct: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60 Query: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL Sbjct: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120 Query: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ Sbjct: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162 >gi|189571618 HRAS-like suppressor 3 [Homo sapiens] Length = 162 Score = 325 bits (833), Expect = 1e-89 Identities = 162/162 (100%), Positives = 162/162 (100%) Query: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV Sbjct: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60 Query: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL Sbjct: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120 Query: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ Sbjct: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162 >gi|8923526 HRAS-like suppressor 2 [Homo sapiens] Length = 162 Score = 223 bits (568), Expect = 6e-59 Identities = 109/157 (69%), Positives = 130/157 (82%) Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65 P P+ GDLIEI R Y HWAIYVGDGYVVHLAP SE+AGAGAASV+SALT+KAIVKKELL Sbjct: 6 PRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVKKELL 65 Query: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125 VAG D Y+VNNKHDD+Y+PLP +KI++RAEELVGQE+ Y LTS+NCEHFVN LRYGV+ Sbjct: 66 SVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLRYGVS 125 Query: 126 RSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162 RSDQV + VA LAA SL+G++ +R+KR++Q Sbjct: 126 RSDQVTGAVTTVGVAAGLLAAASLVGILLARSKRERQ 162 >gi|149588791 retinoic acid receptor responder (tazarotene induced) 3 [Homo sapiens] Length = 164 Score = 165 bits (418), Expect = 1e-41 Identities = 83/162 (51%), Positives = 107/162 (66%), Gaps = 1/162 (0%) Query: 1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60 M +P EPKPGDLIEIFR Y HWA+Y+GDGYV+HLAPPSE GAG++SV S L++ A V Sbjct: 1 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV 60 Query: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120 K+E L DV G Y+VNN D +Y P P II A+E+VGQ++ Y + S NCEHFV +L Sbjct: 61 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL 120 Query: 121 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ 162 RYG +R QV + VA L + + G F+ + QK+ Sbjct: 121 RYGKSRCKQVEKAKVEVGVA-TALGILVVAGCSFAIRRYQKK 161 >gi|9966859 HRAS-like suppressor [Homo sapiens] Length = 168 Score = 148 bits (374), Expect = 2e-36 Identities = 72/154 (46%), Positives = 99/154 (64%), Gaps = 2/154 (1%) Query: 8 PKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYD 67 P PGDLIE+FRP Y+HWA+Y+GDGYV+++AP + A S S + KA+VK +LL D Sbjct: 15 PCPGDLIEVFRPGYQHWALYLGDGYVINIAPVDGIP-ASFTSAKSVFSSKALVKMQLLKD 73 Query: 68 VAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVARS 127 V G+D Y++NNK+D+ Y PLP +II+R+E ++GQEV Y L NCEHFV LRYG S Sbjct: 74 VVGNDTYRINNKYDETYPPLPVEEIIKRSEFVIGQEVAYNLLVNNCEHFVTLLRYGEGVS 133 Query: 128 DQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQK 161 +Q I + S +G +F + +R K Sbjct: 134 EQANRAISTVEFVTAAVGVFSFLG-LFPKGQRAK 166 >gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Homo sapiens] Length = 279 Score = 138 bits (347), Expect = 2e-33 Identities = 75/143 (52%), Positives = 92/143 (64%), Gaps = 3/143 (2%) Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65 P P+PGDLIEIFR Y HWAIYV D VVHLAPPSE G S+ S +++A+VK L Sbjct: 128 PRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRL 185 Query: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125 DV ++VNNK D Y PLP KIIQR +++V + V Y L NCEHFVN LRYGV Sbjct: 186 EDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVP 245 Query: 126 RSDQVRDVII-AASVAGMGLAAM 147 RS QV ++ A AG ++A+ Sbjct: 246 RSQQVEHALMEGAKAAGAVISAV 268 >gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Homo sapiens] Length = 269 Score = 138 bits (347), Expect = 2e-33 Identities = 75/143 (52%), Positives = 92/143 (64%), Gaps = 3/143 (2%) Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65 P P+PGDLIEIFR Y HWAIYV D VVHLAPPSE G S+ S +++A+VK L Sbjct: 118 PRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRL 175 Query: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125 DV ++VNNK D Y PLP KIIQR +++V + V Y L NCEHFVN LRYGV Sbjct: 176 EDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVP 235 Query: 126 RSDQVRDVII-AASVAGMGLAAM 147 RS QV ++ A AG ++A+ Sbjct: 236 RSQQVEHALMEGAKAAGAVISAV 258 >gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Homo sapiens] Length = 253 Score = 108 bits (269), Expect = 3e-24 Identities = 57/108 (52%), Positives = 69/108 (63%), Gaps = 2/108 (1%) Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65 P P+PGDLIEIFR Y HWAIYV D VVHLAPPSE G S+ S +++A+VK L Sbjct: 128 PRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRL 185 Query: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENC 113 DV ++VNNK D Y PLP KIIQR +++V + V Y L NC Sbjct: 186 EDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNC 233 >gi|46249410 lecithin retinol acyltransferase [Homo sapiens] Length = 230 Score = 54.7 bits (130), Expect = 3e-08 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 24/166 (14%) Query: 11 GDLIEIFRPFYRHWAIYVGDGYVVHLAPP-----------SEVAGAGAASVMSALTDKAI 59 GD++E+ R H+ IY+GD V H+ P ++ + ++ + A Sbjct: 48 GDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDMGRTQKVVSNKRLILGVIVKVAS 107 Query: 60 VKKELLYDVAGSDKYQVNNKHDD-KYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVN 118 ++ + + D A VN+ + + L ++ +RAE+L+G Y L NCEHFV Sbjct: 108 IRVDTVEDFAYGANILVNHLDESLQKKALLNEEVARRAEKLLG-FTPYSLLWNNCEHFVT 166 Query: 119 ELRYGVARSDQ-----------VRDVIIAASVAGMGLAAMSLIGVM 153 RYG S Q +RD + A +GLA++ G++ Sbjct: 167 YCRYGTPISPQSDKFCETVKIIIRDQRSVLASAVLGLASIVCTGLV 212 >gi|28557798 family with sequence similarity 84, member B [Homo sapiens] Length = 310 Score = 43.1 bits (100), Expect = 1e-04 Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 22/116 (18%) Query: 9 KPGDLIE-IFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYD 67 KPGDL+E + + Y HWA+YVG+ VVHL + S LTD + Sbjct: 117 KPGDLVEFVSQAQYPHWAVYVGNFQVVHL--------HRLEVINSFLTDAS--------- 159 Query: 68 VAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYG 123 G VN+ + +Y PL S +++ A VG + +L+ N E F RYG Sbjct: 160 -QGRRGRVVNDLY--RYKPLSSSAVVRNALAHVGAKE-RELSWRNSESFAAWCRYG 211 >gi|21553329 family with sequence similarity 84, member A [Homo sapiens] Length = 292 Score = 34.3 bits (77), Expect = 0.048 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 29/123 (23%) Query: 9 KPGDLIEIF--RPFYR------HWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV 60 +PGDL+E+ +P HWA+YVG G ++HL + + Sbjct: 121 EPGDLLELLWLQPAPEPPAPAPHWAVYVGGGQIIHL-------------------HQGEI 161 Query: 61 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL 120 +++ LY+ ++ +V N +Y PL ++Q A +G + ++ N E F Sbjct: 162 RQDSLYEAGAANVGRVVNSW-YRYRPLVAELVVQNACGHLGLK-SEEICWTNSESFAAWC 219 Query: 121 RYG 123 R+G Sbjct: 220 RFG 222 >gi|7949031 cytochrome P450, family 2, subfamily B, polypeptide 6 [Homo sapiens] Length = 491 Score = 31.2 bits (69), Expect = 0.41 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 4 PIPEPKPGDLIE-----IFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKA 58 P P P G+L++ + + F R Y GD + VHL P V G ++ AL DKA Sbjct: 34 PRPLPLLGNLLQMDRRGLLKSFLRFREKY-GDVFTVHLGPRPVVMLCGVEAIREALVDKA 92 >gi|58218986 thymocyte selection pathway associated [Homo sapiens] Length = 641 Score = 29.6 bits (65), Expect = 1.2 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%) Query: 25 AIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSDKYQ----VNNKH 80 ++ VGD ++VH + +EV G V++ L + I+KK Y+ A Y V H Sbjct: 382 SVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKS--YEAALLPLYMEGGFVEVIH 439 Query: 81 DDKYSPL 87 D K P+ Sbjct: 440 DKKQYPI 446 >gi|217416343 fibrosin-like 1 [Homo sapiens] Length = 1045 Score = 27.3 bits (59), Expect = 5.9 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 42 VAGAG-AASVMSALTDKAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELV 100 V+G G + S DKA V E L+ G+DK K + K P+P ++R+ EL Sbjct: 199 VSGRGYSCDSESGPDDKASVGSEKLF-APGTDKGPALEKSEAKAGPVPKVSGLERSRELS 257 Query: 101 GQEVL 105 + L Sbjct: 258 AESFL 262 >gi|166795283 glucagon-like peptide 1 receptor [Homo sapiens] Length = 463 Score = 26.9 bits (58), Expect = 7.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Query: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYV 33 P+ +PG + + P+Y WA V G+V Sbjct: 73 PDGEPGSFVNVSCPWYLPWASSVPQGHV 100 >gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens] Length = 908 Score = 26.9 bits (58), Expect = 7.7 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%) Query: 40 SEVAGAGAASVMSALTD--KAIVKKE--LLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQR 95 S+VA AG +V+ + D I+ K +LY + + + ++ D++ PLP S + + Sbjct: 789 SQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQ 848 Query: 96 AEELVGQ 102 A ++VGQ Sbjct: 849 AVDVVGQ 855 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.135 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,054,243 Number of Sequences: 37866 Number of extensions: 251813 Number of successful extensions: 545 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 526 Number of HSP's gapped (non-prelim): 16 length of query: 162 length of database: 18,247,518 effective HSP length: 94 effective length of query: 68 effective length of database: 14,688,114 effective search space: 998791752 effective search space used: 998791752 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.