Guide to the Human Genome
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Name: PEX26 Sequence: fasta or formatted (305aa) NCBI GI: 189083737
Description:

peroxisome biogenesis factor 26

Referenced in:

Peroxisomes

Other entries for this name:
alt mRNA [305aa] peroxisome biogenesis factor 26
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         35           2
 C cysteine            2.0          6           1
 D aspartate           3.6         11           1
 E glutamate           7.9         24           2
 F phenylalanine       3.6         11           2
 G glycine             4.3         13           2
 H histidine           2.6          8           1
 I isoleucine          2.0          6           1
 K lysine              3.9         12           2
 L leucine            16.1         49           2
 M methionine          1.3          4           1
 N asparagine          1.3          4           1
 P proline             5.9         18           2
 Q glutamine           5.9         18           3
 R arginine            5.9         18           2
 S serine              8.5         26           2
 T threonine           1.3          4           1
 V valine              8.5         26           2
 W tryptophan          2.0          6           1
 Y tyrosine            2.0          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peroxisome biogenesis factor 26 
PEX26                 1.000   peroxisome biogenesis factor 26 
RAB3GAP2              0.010   rab3 GTPase-activating protein, non-catalytic subuni...
TRPM1                 0.010   transient receptor potential cation channel, subfami...
TRIM46                0.009   tripartite motif-containing 46 
DHX36                 0.009   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX36                 0.009   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
MAPK4                 0.009   mitogen-activated protein kinase 4 
TMEM38A               0.009   transmembrane protein 38A 
HAT1                  0.007   histone acetyltransferase 1 
TRPM3                 0.007   transient receptor potential cation channel, subfam...
TRPM3                 0.007   transient receptor potential cation channel, subfam...
TRPM3                 0.007   transient receptor potential cation channel, subfam...
TRPM3                 0.007   transient receptor potential cation channel, subfam...
TRPM3                 0.007   transient receptor potential cation channel, subfam...
TRPM3                 0.007   transient receptor potential cation channel, subfam...
TRPM3                 0.007   transient receptor potential cation channel, subfam...
ZIM3                  0.007   zinc finger, imprinted 3 
KDM5B                 0.007   jumonji, AT rich interactive domain 1B 
CEP70                 0.007   centrosomal protein 70 kDa 
DENND1A               0.007   DENN/MADD domain containing 1A isoform 1 
FANCI                 0.005   Fanconi anemia, complementation group I isoform 1 [...
FANCI                 0.005   Fanconi anemia, complementation group I isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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