Guide to the Human Genome
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Search of human proteins with 187423904

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|187423904 solute carrier family 3, member 1 [Homo sapiens]
         (685 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|187423904 solute carrier family 3, member 1 [Homo sapiens]        1419   0.0  
gi|61744483 solute carrier family 3, member 2 isoform f [Homo sa...   125   1e-28
gi|61744481 solute carrier family 3, member 2 isoform e [Homo sa...   125   1e-28
gi|61744479 solute carrier family 3, member 2 isoform d [Homo sa...   125   1e-28
gi|65506891 solute carrier family 3, member 2 isoform c [Homo sa...   125   1e-28
gi|61744477 solute carrier family 3, member 2 isoform b [Homo sa...   125   1e-28
gi|61744475 solute carrier family 3, member 2 isoform a [Homo sa...   125   1e-28
gi|189458812 glucan (1,4-alpha-), branching enzyme 1 [Homo sapiens]    32   1.5  
gi|93141214 sodium channel, voltage-gated, type II, alpha isofor...    31   3.3  
gi|93141212 sodium channel, voltage-gated, type II, alpha isofor...    31   3.3  
gi|93141210 sodium channel, voltage-gated, type II, alpha isofor...    31   3.3  
gi|4758250 ephrin B2 [Homo sapiens]                                    30   5.7  
gi|222537714 taxilin beta [Homo sapiens]                               30   7.4  
gi|16418457 solute carrier family 26, member 8 isoform a [Homo s...    30   7.4  
gi|20336285 solute carrier family 26, member 8 isoform b [Homo s...    30   7.4  
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    30   9.7  

>gi|187423904 solute carrier family 3, member 1 [Homo sapiens]
          Length = 685

 Score = 1419 bits (3673), Expect = 0.0
 Identities = 685/685 (100%), Positives = 685/685 (100%)

Query: 1   MAEDKSKRDSIEMSMKGCQTNNGFVHNEDILEQTPDPGSSTDNLKHSTRGILGSQEPDFK 60
           MAEDKSKRDSIEMSMKGCQTNNGFVHNEDILEQTPDPGSSTDNLKHSTRGILGSQEPDFK
Sbjct: 1   MAEDKSKRDSIEMSMKGCQTNNGFVHNEDILEQTPDPGSSTDNLKHSTRGILGSQEPDFK 60

Query: 61  GVQPYAGMPKEVLFQFSGQARYRIPREILFWLTVASVLVLIAATIAIIALSPKCLDWWQE 120
           GVQPYAGMPKEVLFQFSGQARYRIPREILFWLTVASVLVLIAATIAIIALSPKCLDWWQE
Sbjct: 61  GVQPYAGMPKEVLFQFSGQARYRIPREILFWLTVASVLVLIAATIAIIALSPKCLDWWQE 120

Query: 121 GPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDF 180
           GPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDF
Sbjct: 121 GPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDF 180

Query: 181 REVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWFQLSRTRTGKYTDYYIWH 240
           REVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWFQLSRTRTGKYTDYYIWH
Sbjct: 181 REVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWFQLSRTRTGKYTDYYIWH 240

Query: 241 DCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQPDLNFRNPDVQEEIKEIL 300
           DCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQPDLNFRNPDVQEEIKEIL
Sbjct: 241 DCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQPDLNFRNPDVQEEIKEIL 300

Query: 301 RFWLTKGVDGFSLDAVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDI 360
           RFWLTKGVDGFSLDAVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDI
Sbjct: 301 RFWLTKGVDGFSLDAVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDI 360

Query: 361 VRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMYYGLPFIQEADFPFNNYLSMLDTVS 420
           VRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMYYGLPFIQEADFPFNNYLSMLDTVS
Sbjct: 361 VRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMYYGLPFIQEADFPFNNYLSMLDTVS 420

Query: 421 GNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSRLGNQYVNVMNMLLFTLPGTPITYY 480
           GNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSRLGNQYVNVMNMLLFTLPGTPITYY
Sbjct: 421 GNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSRLGNQYVNVMNMLLFTLPGTPITYY 480

Query: 481 GEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSNAGFSEASNTWLPTNSDYHTVNVDV 540
           GEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSNAGFSEASNTWLPTNSDYHTVNVDV
Sbjct: 481 GEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSNAGFSEASNTWLPTNSDYHTVNVDV 540

Query: 541 QKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRNDSHYVVYTRELDGIDRIFIVVLNFG 600
           QKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRNDSHYVVYTRELDGIDRIFIVVLNFG
Sbjct: 541 QKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRNDSHYVVYTRELDGIDRIFIVVLNFG 600

Query: 601 ESTLLNLHNMISGLPAKMRIRLSTNSADKGSKVDTSGIFLDKGEGLIFEHNTKNLLHRQT 660
           ESTLLNLHNMISGLPAKMRIRLSTNSADKGSKVDTSGIFLDKGEGLIFEHNTKNLLHRQT
Sbjct: 601 ESTLLNLHNMISGLPAKMRIRLSTNSADKGSKVDTSGIFLDKGEGLIFEHNTKNLLHRQT 660

Query: 661 AFRDRCFVSNRACYSSVLNILYTSC 685
           AFRDRCFVSNRACYSSVLNILYTSC
Sbjct: 661 AFRDRCFVSNRACYSSVLNILYTSC 685


>gi|61744483 solute carrier family 3, member 2 isoform f [Homo
           sapiens]
          Length = 529

 Score =  125 bits (314), Expect = 1e-28
 Identities = 145/617 (23%), Positives = 238/617 (38%), Gaps = 162/617 (26%)

Query: 52  LGSQEPDFKGVQPYAGMPKEVLFQFSGQ---ARYRIPREILFWLTVASVLVLIAATIAII 108
           +   E +      + G+ KE L + +G     R R    +LFWL     L ++A  + II
Sbjct: 47  VAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL---GWLGMLAGAVVII 103

Query: 109 ALSPKCLD-----WWQEGPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWIT 163
             +P+C +     WW  G +Y+I     +     G G+L G++ +LDY+++L +K + + 
Sbjct: 104 VRAPRCRELPAQKWWHTGALYRI--GDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLG 161

Query: 164 SFYKSSLKDFRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWF 223
             +K+   D      D  ++DP FG+ EDF++L+ +   K +++I+D  PN+        
Sbjct: 162 PIHKNQKDDVAQ--TDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYR------- 212

Query: 224 QLSRTRTGKYTDYYIWHDCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQP 283
                                               G +SW   +V              
Sbjct: 213 ------------------------------------GENSWFSTQVDT------------ 224

Query: 284 DLNFRNPDVQEEIKEILRFWLTKGVDGFSL-------DAVKFLLEAKHLRDEIQVNKTQI 336
                   V  ++K+ L FWL  GVDGF +       DA  FL E +++      ++  I
Sbjct: 225 --------VATKVKDALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLI 276

Query: 337 PDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMY 396
                          T    +  I+       D   T                       
Sbjct: 277 AG-------------TNSSDLQQILSLLESNKDLLLT----------------------- 300

Query: 397 YGLPFIQEADFPFNNYLSMLDTVSGNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSR 456
                        ++YLS   + +G     ++T ++ N    +W +W +    +  LTS 
Sbjct: 301 -------------SSYLSDSGS-TGEHTKSLVTQYL-NATGNRWCSWSLS--QARLLTSF 343

Query: 457 LGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSN 516
           L  Q + +  ++LFTLPGTP+  YG+EIG+    AA   +  +         M WD SS 
Sbjct: 344 LPAQLLRLYQLMLFTLPGTPVFSYGDEIGLD--AAALPGQPMEAPV------MLWDESSF 395

Query: 517 AGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRND 576
                A +           + V  Q   P S L L++ LS   + E  L  G F      
Sbjct: 396 PDIPGAVSA---------NMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAG 446

Query: 577 SHYVVYTRELDGIDRIFIVVLNFGE---STLLNLHNM--ISGLPAKMRIRLSTN-SADKG 630
                Y R  D  +R F+VVLNFG+   S  L   ++   + LPAK  + LST    ++G
Sbjct: 447 PGLFSYIRHWDQNER-FLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEG 505

Query: 631 SKVDTSGIFLDKGEGLI 647
           S ++   + L+  EGL+
Sbjct: 506 SPLELERLKLEPHEGLL 522


>gi|61744481 solute carrier family 3, member 2 isoform e [Homo
           sapiens]
          Length = 568

 Score =  125 bits (314), Expect = 1e-28
 Identities = 145/617 (23%), Positives = 238/617 (38%), Gaps = 162/617 (26%)

Query: 52  LGSQEPDFKGVQPYAGMPKEVLFQFSGQ---ARYRIPREILFWLTVASVLVLIAATIAII 108
           +   E +      + G+ KE L + +G     R R    +LFWL     L ++A  + II
Sbjct: 86  VAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL---GWLGMLAGAVVII 142

Query: 109 ALSPKCLD-----WWQEGPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWIT 163
             +P+C +     WW  G +Y+I     +     G G+L G++ +LDY+++L +K + + 
Sbjct: 143 VRAPRCRELPAQKWWHTGALYRI--GDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLG 200

Query: 164 SFYKSSLKDFRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWF 223
             +K+   D      D  ++DP FG+ EDF++L+ +   K +++I+D  PN+        
Sbjct: 201 PIHKNQKDDVAQ--TDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYR------- 251

Query: 224 QLSRTRTGKYTDYYIWHDCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQP 283
                                               G +SW   +V              
Sbjct: 252 ------------------------------------GENSWFSTQVDT------------ 263

Query: 284 DLNFRNPDVQEEIKEILRFWLTKGVDGFSL-------DAVKFLLEAKHLRDEIQVNKTQI 336
                   V  ++K+ L FWL  GVDGF +       DA  FL E +++      ++  I
Sbjct: 264 --------VATKVKDALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLI 315

Query: 337 PDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMY 396
                          T    +  I+       D   T                       
Sbjct: 316 AG-------------TNSSDLQQILSLLESNKDLLLT----------------------- 339

Query: 397 YGLPFIQEADFPFNNYLSMLDTVSGNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSR 456
                        ++YLS   + +G     ++T ++ N    +W +W +    +  LTS 
Sbjct: 340 -------------SSYLSDSGS-TGEHTKSLVTQYL-NATGNRWCSWSLS--QARLLTSF 382

Query: 457 LGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSN 516
           L  Q + +  ++LFTLPGTP+  YG+EIG+    AA   +  +         M WD SS 
Sbjct: 383 LPAQLLRLYQLMLFTLPGTPVFSYGDEIGLD--AAALPGQPMEAPV------MLWDESSF 434

Query: 517 AGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRND 576
                A +           + V  Q   P S L L++ LS   + E  L  G F      
Sbjct: 435 PDIPGAVSA---------NMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAG 485

Query: 577 SHYVVYTRELDGIDRIFIVVLNFGE---STLLNLHNM--ISGLPAKMRIRLSTN-SADKG 630
                Y R  D  +R F+VVLNFG+   S  L   ++   + LPAK  + LST    ++G
Sbjct: 486 PGLFSYIRHWDQNER-FLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEG 544

Query: 631 SKVDTSGIFLDKGEGLI 647
           S ++   + L+  EGL+
Sbjct: 545 SPLELERLKLEPHEGLL 561


>gi|61744479 solute carrier family 3, member 2 isoform d [Homo
           sapiens]
          Length = 599

 Score =  125 bits (314), Expect = 1e-28
 Identities = 145/617 (23%), Positives = 238/617 (38%), Gaps = 162/617 (26%)

Query: 52  LGSQEPDFKGVQPYAGMPKEVLFQFSGQ---ARYRIPREILFWLTVASVLVLIAATIAII 108
           +   E +      + G+ KE L + +G     R R    +LFWL     L ++A  + II
Sbjct: 117 VAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL---GWLGMLAGAVVII 173

Query: 109 ALSPKCLD-----WWQEGPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWIT 163
             +P+C +     WW  G +Y+I     +     G G+L G++ +LDY+++L +K + + 
Sbjct: 174 VRAPRCRELPAQKWWHTGALYRI--GDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLG 231

Query: 164 SFYKSSLKDFRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWF 223
             +K+   D      D  ++DP FG+ EDF++L+ +   K +++I+D  PN+        
Sbjct: 232 PIHKNQKDDVAQ--TDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYR------- 282

Query: 224 QLSRTRTGKYTDYYIWHDCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQP 283
                                               G +SW   +V              
Sbjct: 283 ------------------------------------GENSWFSTQVDT------------ 294

Query: 284 DLNFRNPDVQEEIKEILRFWLTKGVDGFSL-------DAVKFLLEAKHLRDEIQVNKTQI 336
                   V  ++K+ L FWL  GVDGF +       DA  FL E +++      ++  I
Sbjct: 295 --------VATKVKDALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLI 346

Query: 337 PDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMY 396
                          T    +  I+       D   T                       
Sbjct: 347 AG-------------TNSSDLQQILSLLESNKDLLLT----------------------- 370

Query: 397 YGLPFIQEADFPFNNYLSMLDTVSGNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSR 456
                        ++YLS   + +G     ++T ++ N    +W +W +    +  LTS 
Sbjct: 371 -------------SSYLSDSGS-TGEHTKSLVTQYL-NATGNRWCSWSLS--QARLLTSF 413

Query: 457 LGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSN 516
           L  Q + +  ++LFTLPGTP+  YG+EIG+    AA   +  +         M WD SS 
Sbjct: 414 LPAQLLRLYQLMLFTLPGTPVFSYGDEIGLD--AAALPGQPMEAPV------MLWDESSF 465

Query: 517 AGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRND 576
                A +           + V  Q   P S L L++ LS   + E  L  G F      
Sbjct: 466 PDIPGAVSA---------NMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAG 516

Query: 577 SHYVVYTRELDGIDRIFIVVLNFGE---STLLNLHNM--ISGLPAKMRIRLSTN-SADKG 630
                Y R  D  +R F+VVLNFG+   S  L   ++   + LPAK  + LST    ++G
Sbjct: 517 PGLFSYIRHWDQNER-FLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEG 575

Query: 631 SKVDTSGIFLDKGEGLI 647
           S ++   + L+  EGL+
Sbjct: 576 SPLELERLKLEPHEGLL 592


>gi|65506891 solute carrier family 3, member 2 isoform c [Homo
           sapiens]
          Length = 630

 Score =  125 bits (314), Expect = 1e-28
 Identities = 145/617 (23%), Positives = 238/617 (38%), Gaps = 162/617 (26%)

Query: 52  LGSQEPDFKGVQPYAGMPKEVLFQFSGQ---ARYRIPREILFWLTVASVLVLIAATIAII 108
           +   E +      + G+ KE L + +G     R R    +LFWL     L ++A  + II
Sbjct: 148 VAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL---GWLGMLAGAVVII 204

Query: 109 ALSPKCLD-----WWQEGPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWIT 163
             +P+C +     WW  G +Y+I     +     G G+L G++ +LDY+++L +K + + 
Sbjct: 205 VRAPRCRELPAQKWWHTGALYRI--GDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLG 262

Query: 164 SFYKSSLKDFRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWF 223
             +K+   D      D  ++DP FG+ EDF++L+ +   K +++I+D  PN+        
Sbjct: 263 PIHKNQKDDVAQ--TDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYR------- 313

Query: 224 QLSRTRTGKYTDYYIWHDCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQP 283
                                               G +SW   +V              
Sbjct: 314 ------------------------------------GENSWFSTQVDT------------ 325

Query: 284 DLNFRNPDVQEEIKEILRFWLTKGVDGFSL-------DAVKFLLEAKHLRDEIQVNKTQI 336
                   V  ++K+ L FWL  GVDGF +       DA  FL E +++      ++  I
Sbjct: 326 --------VATKVKDALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLI 377

Query: 337 PDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMY 396
                          T    +  I+       D   T                       
Sbjct: 378 AG-------------TNSSDLQQILSLLESNKDLLLT----------------------- 401

Query: 397 YGLPFIQEADFPFNNYLSMLDTVSGNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSR 456
                        ++YLS   + +G     ++T ++ N    +W +W +    +  LTS 
Sbjct: 402 -------------SSYLSDSGS-TGEHTKSLVTQYL-NATGNRWCSWSLS--QARLLTSF 444

Query: 457 LGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSN 516
           L  Q + +  ++LFTLPGTP+  YG+EIG+    AA   +  +         M WD SS 
Sbjct: 445 LPAQLLRLYQLMLFTLPGTPVFSYGDEIGLD--AAALPGQPMEAPV------MLWDESSF 496

Query: 517 AGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRND 576
                A +           + V  Q   P S L L++ LS   + E  L  G F      
Sbjct: 497 PDIPGAVSA---------NMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAG 547

Query: 577 SHYVVYTRELDGIDRIFIVVLNFGE---STLLNLHNM--ISGLPAKMRIRLSTN-SADKG 630
                Y R  D  +R F+VVLNFG+   S  L   ++   + LPAK  + LST    ++G
Sbjct: 548 PGLFSYIRHWDQNER-FLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEG 606

Query: 631 SKVDTSGIFLDKGEGLI 647
           S ++   + L+  EGL+
Sbjct: 607 SPLELERLKLEPHEGLL 623


>gi|61744477 solute carrier family 3, member 2 isoform b [Homo
           sapiens]
          Length = 631

 Score =  125 bits (314), Expect = 1e-28
 Identities = 145/617 (23%), Positives = 238/617 (38%), Gaps = 162/617 (26%)

Query: 52  LGSQEPDFKGVQPYAGMPKEVLFQFSGQ---ARYRIPREILFWLTVASVLVLIAATIAII 108
           +   E +      + G+ KE L + +G     R R    +LFWL     L ++A  + II
Sbjct: 149 VAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL---GWLGMLAGAVVII 205

Query: 109 ALSPKCLD-----WWQEGPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWIT 163
             +P+C +     WW  G +Y+I     +     G G+L G++ +LDY+++L +K + + 
Sbjct: 206 VRAPRCRELPAQKWWHTGALYRI--GDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLG 263

Query: 164 SFYKSSLKDFRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWF 223
             +K+   D      D  ++DP FG+ EDF++L+ +   K +++I+D  PN+        
Sbjct: 264 PIHKNQKDDVAQ--TDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYR------- 314

Query: 224 QLSRTRTGKYTDYYIWHDCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQP 283
                                               G +SW   +V              
Sbjct: 315 ------------------------------------GENSWFSTQVDT------------ 326

Query: 284 DLNFRNPDVQEEIKEILRFWLTKGVDGFSL-------DAVKFLLEAKHLRDEIQVNKTQI 336
                   V  ++K+ L FWL  GVDGF +       DA  FL E +++      ++  I
Sbjct: 327 --------VATKVKDALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLI 378

Query: 337 PDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMY 396
                          T    +  I+       D   T                       
Sbjct: 379 AG-------------TNSSDLQQILSLLESNKDLLLT----------------------- 402

Query: 397 YGLPFIQEADFPFNNYLSMLDTVSGNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSR 456
                        ++YLS   + +G     ++T ++ N    +W +W +    +  LTS 
Sbjct: 403 -------------SSYLSDSGS-TGEHTKSLVTQYL-NATGNRWCSWSLS--QARLLTSF 445

Query: 457 LGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSN 516
           L  Q + +  ++LFTLPGTP+  YG+EIG+    AA   +  +         M WD SS 
Sbjct: 446 LPAQLLRLYQLMLFTLPGTPVFSYGDEIGLD--AAALPGQPMEAPV------MLWDESSF 497

Query: 517 AGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRND 576
                A +           + V  Q   P S L L++ LS   + E  L  G F      
Sbjct: 498 PDIPGAVSA---------NMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAG 548

Query: 577 SHYVVYTRELDGIDRIFIVVLNFGE---STLLNLHNM--ISGLPAKMRIRLSTN-SADKG 630
                Y R  D  +R F+VVLNFG+   S  L   ++   + LPAK  + LST    ++G
Sbjct: 549 PGLFSYIRHWDQNER-FLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEG 607

Query: 631 SKVDTSGIFLDKGEGLI 647
           S ++   + L+  EGL+
Sbjct: 608 SPLELERLKLEPHEGLL 624


>gi|61744475 solute carrier family 3, member 2 isoform a [Homo
           sapiens]
          Length = 661

 Score =  125 bits (314), Expect = 1e-28
 Identities = 145/617 (23%), Positives = 238/617 (38%), Gaps = 162/617 (26%)

Query: 52  LGSQEPDFKGVQPYAGMPKEVLFQFSGQ---ARYRIPREILFWLTVASVLVLIAATIAII 108
           +   E +      + G+ KE L + +G     R R    +LFWL     L ++A  + II
Sbjct: 179 VAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL---GWLGMLAGAVVII 235

Query: 109 ALSPKCLD-----WWQEGPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWIT 163
             +P+C +     WW  G +Y+I     +     G G+L G++ +LDY+++L +K + + 
Sbjct: 236 VRAPRCRELPAQKWWHTGALYRI--GDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLG 293

Query: 164 SFYKSSLKDFRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWF 223
             +K+   D      D  ++DP FG+ EDF++L+ +   K +++I+D  PN+        
Sbjct: 294 PIHKNQKDDVAQ--TDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYR------- 344

Query: 224 QLSRTRTGKYTDYYIWHDCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQP 283
                                               G +SW   +V              
Sbjct: 345 ------------------------------------GENSWFSTQVDT------------ 356

Query: 284 DLNFRNPDVQEEIKEILRFWLTKGVDGFSL-------DAVKFLLEAKHLRDEIQVNKTQI 336
                   V  ++K+ L FWL  GVDGF +       DA  FL E +++      ++  I
Sbjct: 357 --------VATKVKDALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLI 408

Query: 337 PDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRFMGTEAYAESIDRTVMY 396
                          T    +  I+       D   T                       
Sbjct: 409 AG-------------TNSSDLQQILSLLESNKDLLLT----------------------- 432

Query: 397 YGLPFIQEADFPFNNYLSMLDTVSGNSVYEVITSWMENMPEGKWPNWMIGGPDSSRLTSR 456
                        ++YLS   + +G     ++T ++ N    +W +W +    +  LTS 
Sbjct: 433 -------------SSYLSDSGS-TGEHTKSLVTQYL-NATGNRWCSWSLS--QARLLTSF 475

Query: 457 LGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVAANLNESYDINTLRSKSPMQWDNSSN 516
           L  Q + +  ++LFTLPGTP+  YG+EIG+    AA   +  +         M WD SS 
Sbjct: 476 LPAQLLRLYQLMLFTLPGTPVFSYGDEIGLD--AAALPGQPMEAPV------MLWDESSF 527

Query: 517 AGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRND 576
                A +           + V  Q   P S L L++ LS   + E  L  G F      
Sbjct: 528 PDIPGAVSA---------NMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAG 578

Query: 577 SHYVVYTRELDGIDRIFIVVLNFGE---STLLNLHNM--ISGLPAKMRIRLSTN-SADKG 630
                Y R  D  +R F+VVLNFG+   S  L   ++   + LPAK  + LST    ++G
Sbjct: 579 PGLFSYIRHWDQNER-FLVVLNFGDVGLSAGLQASDLPASASLPAKADLLLSTQPGREEG 637

Query: 631 SKVDTSGIFLDKGEGLI 647
           S ++   + L+  EGL+
Sbjct: 638 SPLELERLKLEPHEGLL 654


>gi|189458812 glucan (1,4-alpha-), branching enzyme 1 [Homo sapiens]
          Length = 702

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 173 FRYGVEDFREVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDK------------H 220
           F Y +  F      +GT E+ + LV   H  G+ +++D + +H S               
Sbjct: 249 FGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDS 308

Query: 221 IWFQLSRTRTGKYTDYYIWHDCTHENGKTIPPNN--WLSVYGNSSWHFDEVRNQCYFH 276
            +F      T    D  ++   + E  + +  N   WL  Y    + FD V +  Y H
Sbjct: 309 CYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHH 366


>gi|93141214 sodium channel, voltage-gated, type II, alpha isoform 2
           [Homo sapiens]
          Length = 2005

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 96  SVLVLIAATIAIIALSPKCLDWWQEGPMYQIYPRSFKDSNKDGNG 140
           SV  LI   + +  L  KCL W  +   ++I   SF +++ DGNG
Sbjct: 260 SVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSLDGNG 304


>gi|93141212 sodium channel, voltage-gated, type II, alpha isoform 1
           [Homo sapiens]
          Length = 2005

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 96  SVLVLIAATIAIIALSPKCLDWWQEGPMYQIYPRSFKDSNKDGNG 140
           SV  LI   + +  L  KCL W  +   ++I   SF +++ DGNG
Sbjct: 260 SVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSLDGNG 304


>gi|93141210 sodium channel, voltage-gated, type II, alpha isoform 1
           [Homo sapiens]
          Length = 2005

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 96  SVLVLIAATIAIIALSPKCLDWWQEGPMYQIYPRSFKDSNKDGNG 140
           SV  LI   + +  L  KCL W  +   ++I   SF +++ DGNG
Sbjct: 260 SVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSLDGNG 304


>gi|4758250 ephrin B2 [Homo sapiens]
          Length = 333

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 11/63 (17%)

Query: 3   EDKSKRDSIEMSMKG-CQTNNGFVHNEDILEQTPDPGSSTD--NLKHSTRGILGSQEPDF 59
           +D ++R  +E    G   T + FV         P+PGSSTD  +  HS   ILGS+   F
Sbjct: 177 KDPTRRPELEAGTNGRSSTTSPFVK--------PNPGSSTDGNSAGHSGNNILGSEVALF 228

Query: 60  KGV 62
            G+
Sbjct: 229 AGI 231


>gi|222537714 taxilin beta [Homo sapiens]
          Length = 684

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 315 AVKFLLEAKHLRDEIQVNKTQIPDTVTQYSELYHDFTTTQVGMHDIVRSFRQTMDQ 370
           A ++ L+AK L+++  V + Q+    T YS  + +F +T    +++  +F+Q MD+
Sbjct: 339 AAEWKLQAKVLKEQETVLQAQL----TLYSGRFEEFQSTLTKSNEVFATFKQEMDK 390


>gi|16418457 solute carrier family 26, member 8 isoform a [Homo
           sapiens]
          Length = 970

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 488 NIVAANLNESYDINTLRSKSPMQWDNSS----NAG--FSEASNTWLPTNSDYHTVN--VD 539
           N++  +  ES + +   S+  + +  SS    N G  + E    WLP NS  ++     D
Sbjct: 640 NLIHCSHFESMNTSQTASEDQVPYTVSSVSQKNQGQQYEEVEEVWLPNNSSRNSSPGLPD 699

Query: 540 VQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRNDSHYVVYTRELDGIDRIFIVVLNF 599
           V ++Q R +L  Y D SLL +   ++      H  +    VV  +  +      I++L  
Sbjct: 700 VAESQGRRSLIPYSDASLLPSVHTIILDFSMVHYVDSRGLVVLRQICNAFQNANILILIA 759

Query: 600 G 600
           G
Sbjct: 760 G 760


>gi|20336285 solute carrier family 26, member 8 isoform b [Homo
           sapiens]
          Length = 865

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 488 NIVAANLNESYDINTLRSKSPMQWDNSS----NAG--FSEASNTWLPTNSDYHTVN--VD 539
           N++  +  ES + +   S+  + +  SS    N G  + E    WLP NS  ++     D
Sbjct: 535 NLIHCSHFESMNTSQTASEDQVPYTVSSVSQKNQGQQYEEVEEVWLPNNSSRNSSPGLPD 594

Query: 540 VQKTQPRSALKLYQDLSLLHANELLLNRGWFCHLRNDSHYVVYTRELDGIDRIFIVVLNF 599
           V ++Q R +L  Y D SLL +   ++      H  +    VV  +  +      I++L  
Sbjct: 595 VAESQGRRSLIPYSDASLLPSVHTIILDFSMVHYVDSRGLVVLRQICNAFQNANILILIA 654

Query: 600 G 600
           G
Sbjct: 655 G 655


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
           [Homo sapiens]
          Length = 2073

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 592 IFIVVLNFGESTLLNLHNMISGLPAKMRIRLSTNSADKGSKVD 634
           IF  + +F  +T L  H M+  L  K+  ++ T S  KGS  D
Sbjct: 613 IFKAIAHFKRTTFLKKHRMLGRLKYKVTPQMGTPSPGKGSLTD 655


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,714,975
Number of Sequences: 37866
Number of extensions: 1149844
Number of successful extensions: 2428
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2396
Number of HSP's gapped (non-prelim): 30
length of query: 685
length of database: 18,247,518
effective HSP length: 109
effective length of query: 576
effective length of database: 14,120,124
effective search space: 8133191424
effective search space used: 8133191424
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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