Guide to the Human Genome
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Name: PNLIP Sequence: fasta or formatted (465aa) NCBI GI: 10835000
Description:

pancreatic lipase precursor

Referenced in:

Lipid Metabolism
Pancreas and Insulin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         25           2
 C cysteine            3.0         14           1
 D aspartate           5.6         26           2
 E glutamate           4.5         21           2
 F phenylalanine       6.0         28           2
 G glycine             9.7         45           2
 H histidine           2.4         11           1
 I isoleucine          5.4         25           2
 K lysine              5.4         25           2
 L leucine             6.9         32           3
 M methionine          1.1          5           1
 N asparagine          6.7         31           2
 P proline             5.6         26           1
 Q glutamine           2.6         12           1
 R arginine            3.9         18           2
 S serine              7.3         34           3
 T threonine           5.8         27           1
 V valine              8.0         37           2
 W tryptophan          1.7          8           1
 Y tyrosine            3.2         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pancreatic lipase precursor 
PNLIPRP1              0.684   pancreatic lipase-related protein 1 
PNLIPRP2              0.655   pancreatic lipase-related protein 2 
PNLIPRP3              0.421   pancreatic lipase-related protein 3 
LIPH                  0.185   lipase, member H precursor 
LIPG                  0.181   endothelial lipase precursor 
LPL                   0.179   lipoprotein lipase precursor 
LIPC                  0.168   lipase C precursor 
LIPI                  0.167   lipase, member I 
PLA1A                 0.146   phospholipase A1 member A 
MGAT3                 0.005   mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetyl...
MGAT3                 0.005   mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetyl...
MICAL2                0.005   microtubule associated monoxygenase, calponin and LIM...
MYST4                 0.005   MYST histone acetyltransferase (monocytic leukemia)...
ZNF417                0.005   zinc finger protein 417 
RASEF                 0.004   RAS and EF-hand domain containing 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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