Guide to the Human Genome
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Name: LIPH Sequence: fasta or formatted (451aa) NCBI GI: 21245106
Description:

lipase, member H precursor

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         22           2
 C cysteine            2.9         13           1
 D aspartate           6.9         31           2
 E glutamate           3.8         17           2
 F phenylalanine       4.9         22           2
 G glycine             7.1         32           2
 H histidine           2.7         12           1
 I isoleucine          4.9         22           2
 K lysine              5.3         24           2
 L leucine            10.9         49           2
 M methionine          2.9         13           1
 N asparagine          4.0         18           1
 P proline             5.1         23           2
 Q glutamine           3.3         15           1
 R arginine            5.3         24           2
 S serine              7.1         32           2
 T threonine           6.7         30           2
 V valine              6.0         27           4
 W tryptophan          1.1          5           1
 Y tyrosine            4.4         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipase, member H precursor 
LIPI                  0.419   lipase, member I 
PLA1A                 0.249   phospholipase A1 member A 
PNLIPRP2              0.198   pancreatic lipase-related protein 2 
PNLIP                 0.194   pancreatic lipase precursor 
PNLIPRP1              0.190   pancreatic lipase-related protein 1 
PNLIPRP3              0.175   pancreatic lipase-related protein 3 
LIPG                  0.172   endothelial lipase precursor 
LIPC                  0.158   lipase C precursor 
LPL                   0.153   lipoprotein lipase precursor 
NODAL                 0.007   nodal precursor 
MYT1L                 0.006   myelin transcription factor 1-like 
PTGS2                 0.006   prostaglandin-endoperoxide synthase 2 precursor [Homo...
SLC7A3                0.004   solute carrier family 7 (cationic amino acid transp...
SLC7A3                0.004   solute carrier family 7 (cationic amino acid transp...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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