Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LIPC Sequence: fasta or formatted (499aa) NCBI GI: 194097335
Description:

lipase C precursor

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         26           2
 C cysteine            2.4         12           1
 D aspartate           3.4         17           2
 E glutamate           4.4         22           2
 F phenylalanine       5.0         25           1
 G glycine             7.6         38           2
 H histidine           4.2         21           1
 I isoleucine          7.4         37           2
 K lysine              5.8         29           2
 L leucine             9.6         48           3
 M methionine          2.2         11           1
 N asparagine          3.6         18           1
 P proline             4.2         21           1
 Q glutamine           5.4         27           2
 R arginine            4.8         24           2
 S serine              8.0         40           2
 T threonine           7.2         36           2
 V valine              5.6         28           1
 W tryptophan          1.8          9           1
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipase C precursor 
LIPG                  0.382   endothelial lipase precursor 
LPL                   0.373   lipoprotein lipase precursor 
PNLIPRP3              0.172   pancreatic lipase-related protein 3 
PLA1A                 0.163   phospholipase A1 member A 
PNLIP                 0.161   pancreatic lipase precursor 
PNLIPRP1              0.159   pancreatic lipase-related protein 1 
PNLIPRP2              0.154   pancreatic lipase-related protein 2 
LIPI                  0.146   lipase, member I 
LIPH                  0.144   lipase, member H precursor 
ABHD6                 0.008   abhydrolase domain containing 6 
CPM                   0.005   carboxypeptidase M precursor 
CPM                   0.005   carboxypeptidase M precursor 
CPM                   0.005   carboxypeptidase M precursor 
ALOX15B               0.004   arachidonate 15-lipoxygenase, second type isoform b ...
ALOX15B               0.004   arachidonate 15-lipoxygenase, second type isoform a ...
ALOX15B               0.004   arachidonate 15-lipoxygenase, second type isoform d ...
DNAH3                 0.004   dynein, axonemal, heavy chain 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press