Guide to the Human Genome
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Name: PNLIPRP3 Sequence: fasta or formatted (467aa) NCBI GI: 190341077
Description:

pancreatic lipase-related protein 3

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         29           2
 C cysteine            2.8         13           1
 D aspartate           4.5         21           1
 E glutamate           4.5         21           1
 F phenylalanine       7.1         33           2
 G glycine             9.0         42           2
 H histidine           3.2         15           1
 I isoleucine          6.4         30           1
 K lysine              6.2         29           2
 L leucine             8.1         38           2
 M methionine          2.1         10           1
 N asparagine          6.2         29           2
 P proline             4.3         20           1
 Q glutamine           2.1         10           1
 R arginine            4.1         19           1
 S serine              6.6         31           2
 T threonine           5.8         27           1
 V valine              5.4         25           2
 W tryptophan          1.7          8           1
 Y tyrosine            3.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pancreatic lipase-related protein 3 
PNLIPRP2              0.442   pancreatic lipase-related protein 2 
PNLIPRP1              0.441   pancreatic lipase-related protein 1 
PNLIP                 0.420   pancreatic lipase precursor 
LIPC                  0.180   lipase C precursor 
LIPH                  0.167   lipase, member H precursor 
LIPG                  0.166   endothelial lipase precursor 
LPL                   0.150   lipoprotein lipase precursor 
LIPI                  0.150   lipase, member I 
PLA1A                 0.130   phospholipase A1 member A 
MAPKBP1               0.007   mitogen-activated protein kinase binding protein 1 ...
MAPKBP1               0.007   mitogen-activated protein kinase binding protein 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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