Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SLC7A7 Sequence: fasta or formatted (511aa) NCBI GI: 186910306
Description:

solute carrier family 7 member 7

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [511aa] solute carrier family 7 member 7
alt mRNA [511aa] solute carrier family 7 member 7
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         46           3
 C cysteine            2.3         12           1
 D aspartate           3.1         16           1
 E glutamate           4.3         22           2
 F phenylalanine       6.7         34           2
 G glycine             7.2         37           2
 H histidine           0.8          4           1
 I isoleucine          9.8         50           2
 K lysine              2.7         14           2
 L leucine            11.9         61           2
 M methionine          2.0         10           1
 N asparagine          2.9         15           1
 P proline             5.1         26           1
 Q glutamine           2.2         11           1
 R arginine            3.3         17           2
 S serine              8.4         43           2
 T threonine           4.1         21           2
 V valine              8.0         41           1
 W tryptophan          1.4          7           1
 Y tyrosine            4.7         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 7 member 7 
SLC7A7                1.000   solute carrier family 7 member 7 
SLC7A7                1.000   solute carrier family 7 member 7 
SLC7A6                0.743   solute carrier family 7 (cationic amino acid transp...
SLC7A6                0.743   solute carrier family 7 (cationic amino acid transp...
SLC7A8                0.459   solute carrier family 7 (cationic amino acid transpo...
SLC7A5                0.455   solute carrier family 7 (cationic amino acid transpo...
SLC7A11               0.423   solute carrier family 7, (cationic amino acid transpo...
SLC7A10               0.410   solute carrier family 7, member 10 
SLC7A9                0.390   solute carrier family 7, member 9 
SLC7A9                0.390   solute carrier family 7, member 9 
SLC7A8                0.244   solute carrier family 7 (cationic amino acid transpo...
SLC7A13               0.224   solute carrier family 7, (cationic amino acid transp...
SLC7A4                0.077   solute carrier family 7 (cationic amino acid transp...
SLC7A2                0.068   solute carrier family 7, member 2 isoform 2 
SLC7A1                0.066   solute carrier family 7 (cationic amino acid transpor...
SLC7A3                0.066   solute carrier family 7 (cationic amino acid transp...
SLC7A3                0.066   solute carrier family 7 (cationic amino acid transp...
SLC7A2                0.065   solute carrier family 7, member 2 isoform 1 
SLC7A14               0.050   solute carrier family 7 (cationic amino acid transp...
SLC12A5               0.008   solute carrier family 12 (potassium-chloride transp...
SLC12A5               0.008   solute carrier family 12 (potassium-chloride transpo...
SLC16A9               0.007   solute carrier family 16 (monocarboxylic acid transp...
TPCN1                 0.006   two pore segment channel 1 isoform 1 
TPCN1                 0.006   two pore segment channel 1 isoform 2 
SLC36A1               0.005   solute carrier family 36 member 1 
SLC16A4               0.005   solute carrier family 16, member 4 
GPR78                 0.005   G protein-coupled receptor 78 
ENTPD6                0.005   ectonucleoside triphosphate diphosphohydrolase 6 is...
ENTPD6                0.005   ectonucleoside triphosphate diphosphohydrolase 6 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press