Guide to the Human Genome
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Name: SLC7A13 Sequence: fasta or formatted (470aa) NCBI GI: 71999149
Description:

solute carrier family 7, (cationic amino acid transporter, y+ system) member 13

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         32           1
 C cysteine            2.3         11           1
 D aspartate           1.7          8           1
 E glutamate           3.0         14           2
 F phenylalanine       6.8         32           2
 G glycine             5.7         27           2
 H histidine           0.9          4           1
 I isoleucine          9.6         45           2
 K lysine              4.0         19           2
 L leucine            15.7         74           3
 M methionine          1.5          7           1
 N asparagine          2.8         13           1
 P proline             4.9         23           1
 Q glutamine           2.6         12           1
 R arginine            3.0         14           3
 S serine              9.8         46           2
 T threonine           5.1         24           2
 V valine              7.9         37           2
 W tryptophan          2.1         10           2
 Y tyrosine            3.8         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 7, (cationic amino acid transp... 
SLC7A6                0.262   solute carrier family 7 (cationic amino acid transp...
SLC7A6                0.262   solute carrier family 7 (cationic amino acid transp...
SLC7A9                0.254   solute carrier family 7, member 9 
SLC7A9                0.254   solute carrier family 7, member 9 
SLC7A7                0.245   solute carrier family 7 member 7 
SLC7A7                0.245   solute carrier family 7 member 7 
SLC7A7                0.245   solute carrier family 7 member 7 
SLC7A10               0.231   solute carrier family 7, member 10 
SLC7A8                0.226   solute carrier family 7 (cationic amino acid transpo...
SLC7A11               0.225   solute carrier family 7, (cationic amino acid transpo...
SLC7A5                0.219   solute carrier family 7 (cationic amino acid transpo...
SLC7A8                0.129   solute carrier family 7 (cationic amino acid transpo...
SLC7A14               0.060   solute carrier family 7 (cationic amino acid transp...
SLC7A4                0.052   solute carrier family 7 (cationic amino acid transp...
SLC7A2                0.044   solute carrier family 7, member 2 isoform 2 
SLC7A1                0.042   solute carrier family 7 (cationic amino acid transpor...
SLC7A2                0.040   solute carrier family 7, member 2 isoform 1 
SLC7A3                0.039   solute carrier family 7 (cationic amino acid transp...
SLC7A3                0.039   solute carrier family 7 (cationic amino acid transp...
SLC12A1               0.016   sodium potassium chloride cotransporter 2 
SLC12A2               0.014   solute carrier family 12 (sodium/potassium/chloride t...
OR4F3                 0.006   olfactory receptor, family 4, subfamily F, member 3 ...
OR4F29                0.006   olfactory receptor, family 4, subfamily F, member 2...
OR4F16                0.006   olfactory receptor, family 4, subfamily F, member 16...
OR4F21                0.006   olfactory receptor, family 4, subfamily F, member 21...
ABCC9                 0.004   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.004   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.004   ATP-binding cassette, sub-family C, member 9 isofor...
EML3                  0.004   echinoderm microtubule associated protein like 3 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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