Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 17158044
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17158044 ribosomal protein S6 [Homo sapiens]
(249 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17158044 ribosomal protein S6 [Homo sapiens] 488 e-138
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 41 9e-04
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 41 0.001
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 39 0.003
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 39 0.003
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 39 0.003
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 39 0.003
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 39 0.003
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 39 0.004
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 38 0.007
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 37 0.012
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 37 0.012
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.016
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 37 0.021
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 36 0.036
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 35 0.047
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 35 0.047
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 35 0.061
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.080
gi|94721321 coiled-coil domain containing 11 [Homo sapiens] 35 0.080
gi|24308223 hypothetical protein LOC57577 [Homo sapiens] 35 0.080
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 34 0.10
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 34 0.10
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 34 0.10
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 34 0.10
gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens] 34 0.10
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 34 0.14
gi|154354979 myosin X [Homo sapiens] 34 0.14
gi|225579092 S-phase cyclin A-associated protein in the ER isofo... 34 0.14
>gi|17158044 ribosomal protein S6 [Homo sapiens]
Length = 249
Score = 488 bits (1256), Expect = e-138
Identities = 249/249 (100%), Positives = 249/249 (100%)
Query: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLV 180
IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLV
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLV 180
Query: 181 TPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRAS 240
TPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRAS
Sbjct: 181 TPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRAS 240
Query: 241 TSKSESSQK 249
TSKSESSQK
Sbjct: 241 TSKSESSQK 249
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 41.2 bits (95), Expect = 9e-04
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 147 LSKEDDVRQYVVRKPLNKEGKKPRTKAPK--IQRLVTPRVLQHKRRRIALKKQRTKKNKE 204
+ KE+ ++ V+K + KE KK K PK +++ P+ ++ + +KK+ K+ K+
Sbjct: 669 IKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKE-----VKKEEKKEVKK 723
Query: 205 EAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
E E K + K K+AK K +++ ++ ++L+ K E S K
Sbjct: 724 EEKEPKKEIKKLPKDAK-KSSTPLSEAKKPAALKPKVPKKEESVK 767
Score = 33.1 bits (74), Expect = 0.23
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 118 EKDIPGLTDTT-VPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNK--EGKKPRTKAP 174
EK++P + + V + K+A+ ++ +KE V++ KP +K E +KP+ +
Sbjct: 604 EKEVPSKEEPSPVKAEVAEKQATDVKP--KAAKEKTVKKETKVKPEDKKEEKEKPKKEVA 661
Query: 175 KIQRLVTPRVLQHKRRRIALKKQRTKK-NKEEAAEYAKLLAK-----------RMKEAKE 222
K + TP + K ++ +KK+ K+ KEE E K + K + +E KE
Sbjct: 662 KKEDK-TPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKE 720
Query: 223 KRQEQIAKRRRLSSLRASTSKSES 246
++E+ ++ + L KS +
Sbjct: 721 VKKEEKEPKKEIKKLPKDAKKSST 744
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRR 190
RRL +R R+R+ L++E + R + +E ++ R KA + Q ++
Sbjct: 621 RRLQAERDKRMREE-QLAREAEARAEREAEARRREEQEAREKA---------QAEQEEQE 670
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQ 248
R+ +K+ + E AE +L +R K +++ QE+ +R+RL + T KSE S+
Sbjct: 671 RLQKQKEEAEARSREEAERQRL--EREKHFQQQEQERQERRKRLEEIMKRTRKSEVSE 726
Score = 28.1 bits (61), Expect = 7.5
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 130 PRRLGPKRASRIRKLFNLSKEDDVRQYVVRKP--LNKEGKKPRTKAPKIQ----RLVTPR 183
P + K+A KL +E+ + +K L KE K + ++Q RL R
Sbjct: 127 PTKQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQR 186
Query: 184 VLQHKRRRIALKKQRTK--KNKEE-AAEYAKLLAKRMKEAKEKR 224
+ +RR ++QR K KNKE A + + K E +++R
Sbjct: 187 LKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQR 230
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 39.3 bits (90), Expect = 0.003
Identities = 25/120 (20%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRR 190
RR RA R + +E +Q + + +E +K R + +R + + + +
Sbjct: 735 RREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQ 794
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKR-QEQIAKRRRLSSLRASTSKSESSQK 249
IAL++QR ++ +++ E + L +R +E +E+R QE++ +++ + + + + E+ ++
Sbjct: 795 EIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRR 854
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 39.3 bits (90), Expect = 0.003
Identities = 25/120 (20%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRR 190
RR RA R + +E +Q + + +E +K R + +R + + + +
Sbjct: 762 RREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQ 821
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKR-QEQIAKRRRLSSLRASTSKSESSQK 249
IAL++QR ++ +++ E + L +R +E +E+R QE++ +++ + + + + E+ ++
Sbjct: 822 EIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRR 881
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 39.3 bits (90), Expect = 0.003
Identities = 25/120 (20%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRR 190
RR RA R + +E +Q + + +E +K R + +R + + + +
Sbjct: 741 RREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQ 800
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKR-QEQIAKRRRLSSLRASTSKSESSQK 249
IAL++QR ++ +++ E + L +R +E +E+R QE++ +++ + + + + E+ ++
Sbjct: 801 EIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRR 860
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 39.3 bits (90), Expect = 0.003
Identities = 25/120 (20%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRR 190
RR RA R + +E +Q + + +E +K R + +R + + + +
Sbjct: 741 RREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQ 800
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKR-QEQIAKRRRLSSLRASTSKSESSQK 249
IAL++QR ++ +++ E + L +R +E +E+R QE++ +++ + + + + E+ ++
Sbjct: 801 EIALRRQREEEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRR 860
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 39.3 bits (90), Expect = 0.003
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 116 KGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVV----RKPLNKEGKKPRT 171
+G K+ L + R K+A R L+ ED ++ + R + KE + RT
Sbjct: 1207 EGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRT 1266
Query: 172 KAPKIQR--LVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIA 229
+++R L R LQ RR++ + + E AE LA + KE R+E +
Sbjct: 1267 GLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLG 1326
Query: 230 KRRRLSSLRAS 240
R+RL AS
Sbjct: 1327 LRQRLLKGEAS 1337
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 38.9 bits (89), Expect = 0.004
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 115 KKGEKDIPGLTDTTVPRRLGPKRAS--RIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTK 172
KKGEK+ + ++ GP +A+ +++ KE++ RQ +E + R +
Sbjct: 321 KKGEKE-----EKEKEKKKGPSKATVKAMQEALAKLKEEEERQ-----KREEEERIKRLE 370
Query: 173 APKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQ 225
+ +R R+ Q KR R KKQ+ K+ KE + KLL K +EA+ + +
Sbjct: 371 ELEAKRKEEERLEQEKRER---KKQKEKERKERLKKEGKLLTKSQREARARAE 420
Score = 31.6 bits (70), Expect = 0.67
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 149 KEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAE 208
K+D ++ ++ KE KK +KA T + +Q ++ +++R K+ +EE +
Sbjct: 315 KKDKKKKKGEKEEKEKEKKKGPSKA-------TVKAMQEALAKLKEEEERQKREEEERIK 367
Query: 209 YAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSE 245
+ L + KE + QE+ ++++ R K E
Sbjct: 368 RLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKE 404
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 38.1 bits (87), Expect = 0.007
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 165 EGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAA----EYAKLLAKRMKEA 220
E ++ R K ++QR R L+ + + +R ++ KEE A E ++ +R K
Sbjct: 535 EAEQAREKEEQLQRQAEERALRERE-----EAERAQRQKEEEARVREEAERVRQEREKHF 589
Query: 221 KEKRQEQIAKRRRLSSLRASTSKSESSQK 249
+ + QE++ +++RL + T ++E++ K
Sbjct: 590 QREEQERLERKKRLEEIMKRTRRTEATDK 618
Score = 31.2 bits (69), Expect = 0.88
Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 150 EDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEY 209
E+ R ++ L +E ++ + + Q + + + +R+A ++RT + +EE+
Sbjct: 477 EEATRLLAEKRRLAREQREKEERERREQEELERQKREELAQRVA--EERTTRREEESRRL 534
Query: 210 AKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQ 248
A+ +E +++ E+ A R R + RA K E ++
Sbjct: 535 EAEQAREKEEQLQRQAEERALREREEAERAQRQKEEEAR 573
Score = 28.1 bits (61), Expect = 7.5
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 163 NKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
NK P + QRL R + +++ A + ++ + Y K L +R K +E
Sbjct: 53 NKPDPPPVLRVDDRQRLARERREEREKQLAAREIVWLEREERARQHYEKHLEERKKRLEE 112
Query: 223 KRQEQIAKRRRLSSLR 238
+RQ++ +R + R
Sbjct: 113 QRQKEERRRAAVEEKR 128
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 37.4 bits (85), Expect = 0.012
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 159 RKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMK 218
++ KE K+ R K K +R R + +R+R +KQR ++ ++E KR K
Sbjct: 47 KREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKER-------RKRKK 99
Query: 219 EAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
E K++ ++Q +R R + E+ Q+
Sbjct: 100 EKKKRERKQRGRRERKKKKERKERERENKQR 130
Score = 35.8 bits (81), Expect = 0.036
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAP-----KIQRLVTPRVL 185
R+ + R RK K+ R+ R+ KE KK K K ++ R
Sbjct: 66 RKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERER 125
Query: 186 QHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232
++K+RR +K+R KK + + + K KR ++ K++++E+ K+R
Sbjct: 126 ENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKR 172
Score = 35.0 bits (79), Expect = 0.061
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 136 KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALK 195
+ + R ++ K R+ ++ K+ KK R K + + R + K+R+ +
Sbjct: 32 RESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERRE 91
Query: 196 KQRTKKNKE----EAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
K+R K+ KE E + + K+ KE KE+ +E +R R R + + ++
Sbjct: 92 KERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKR 149
Score = 34.7 bits (78), Expect = 0.080
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 136 KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALK 195
+R RK K+ + +Q R+ K+ +K R + K +R + KRR+ +
Sbjct: 89 RREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRR----ERKRKKRRKKKRR 144
Query: 196 KQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
K+R K ++E + + KR KE +EK++E+ K R+ R + + +K
Sbjct: 145 KER--KREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERK 196
Score = 34.3 bits (77), Expect = 0.10
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 164 KEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTK-KNKEEAAEYAKLLAKRMKEAKE 222
K+ +K R + + +R R Q K RR +++R K K K E + + K+ KE KE
Sbjct: 63 KKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKE 122
Query: 223 K------RQEQIAKRRRLSSLRASTSKSESSQK 249
+ R+E+ K+RR R + + K
Sbjct: 123 RERENKQRRERKRKKRRKKKRRKERKREKERGK 155
Score = 33.9 bits (76), Expect = 0.14
Identities = 23/114 (20%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 136 KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALK 195
K+ R ++ KE + ++ R+ ++ KK + K + QR + +R++ +
Sbjct: 67 KKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRG------RRERKKKKER 120
Query: 196 KQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
K+R ++NK+ K K+ + + KR+++ KR R R + + ++
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRER 174
Score = 32.3 bits (72), Expect = 0.40
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 136 KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALK 195
+R R R+ KE R+ ++ ++ KK R K + +R + +R+R K
Sbjct: 105 ERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRK 164
Query: 196 KQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRR 233
K+ +K +E + K +R KE +E+++E+ +RR+
Sbjct: 165 KEEREKKRERNRKERKKERER-KERRERKKERKKERRK 201
Score = 31.2 bits (69), Expect = 0.88
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 137 RASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKK 196
R R +K +E + +Q RK + KK R + + + + KR++ +K
Sbjct: 111 RRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREK 170
Query: 197 QRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSES 246
+R + KE E + K +E K++R+++ K++ R + +++S
Sbjct: 171 KRERNRKERKKERER---KERRERKKERKKERRKKKERKKDRKTDRQTDS 217
Score = 30.8 bits (68), Expect = 1.2
Identities = 24/120 (20%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 136 KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALK 195
K+ R R+ +E + ++ +K K K+ R K + +R + + +R + K
Sbjct: 37 KKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRK 96
Query: 196 KQRTKKNKEEAA------EYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
+++ KK +E + K +R +E K++R+ + KRR+ + + E ++
Sbjct: 97 RKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKR 156
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 37.4 bits (85), Expect = 0.012
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 159 RKPLNKEGKKPRTKAPKIQRLVTP-----------RVLQHKRRRIALKKQRTKKNKEEAA 207
RKP K KPR + PK +R + R+ + KRR A +++ + + E
Sbjct: 277 RKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQE 336
Query: 208 EYAKLLAKRMKEAKEKRQEQ 227
E + L ++ KE KE+R+E+
Sbjct: 337 EELRRLREQEKEEKERRRER 356
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 37.4 bits (85), Expect = 0.012
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 159 RKPLNKEGKKPRTKAPKIQRLVTP-----------RVLQHKRRRIALKKQRTKKNKEEAA 207
RKP K KPR + PK +R + R+ + KRR A +++ + + E
Sbjct: 277 RKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQE 336
Query: 208 EYAKLLAKRMKEAKEKRQEQ 227
E + L ++ KE KE+R+E+
Sbjct: 337 EELRRLREQEKEEKERRRER 356
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.0 bits (84), Expect = 0.016
Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 102 VDANLSVLNLVIVKK-----GEKDIPG----LTDTTVPRRLGPKRASRIRKLFNLSKEDD 152
+ ++ L++++K G+++ PG +T+T L K+ R+R F +S
Sbjct: 87 IQEKVATFRLMLLEKDVNPGGKEETPGQRPAVTETHQLAELNEKKNERLRAAFGISDSYV 146
Query: 153 VRQYVVRKPLNKEGKKPRTKAPKIQRLV-------TPRVLQHKRRRIALKKQRTKKNKEE 205
+ +E K+P + PK LV +P Q K+ KK++ + + E
Sbjct: 147 DGSSFDPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKK-----KKKKDRGRRSE 201
Query: 206 AAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
++ + K K+ K + + + KR+ S S KS+ ++
Sbjct: 202 SSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKR 245
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 36.6 bits (83), Expect = 0.021
Identities = 25/112 (22%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 140 RIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVL-QHKRRRIALKKQR 198
R+R K+++ R+ + +EG++ R + +R +L + K+ + +K
Sbjct: 444 RLRLEEEARKQEEERKRQEEEKKKQEGEEKRKAGEEAKRKAEEELLLKEKQEQEKQEKAM 503
Query: 199 TKKNKEEAAEYAKLLAKRMKEAKEK-----RQEQIAKRRRLSSLRASTSKSE 245
+K KE A A+ +A++M+ +E+ QE++ +++R+ + T KS+
Sbjct: 504 IEKQKEAAETKAREVAEQMRLEREQIMLQIEQERLERKKRIDEIMKRTRKSD 555
Score = 34.7 bits (78), Expect = 0.080
Identities = 20/84 (23%), Positives = 41/84 (48%)
Query: 165 EGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKR 224
+G + K+ + QRL R + ++ A ++Q +K K +Y K + +R ++ +E+R
Sbjct: 43 QGMEGFLKSDERQRLAKERREEREKCLAAREQQILEKQKRARLQYEKQMEERWRKLEEQR 102
Query: 225 QEQIAKRRRLSSLRASTSKSESSQ 248
Q + KR + R + E +
Sbjct: 103 QREDQKRAAVEEKRKQKLREEEER 126
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 35.8 bits (81), Expect = 0.036
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 159 RKPLNKEGKKPRTKAPKIQRLVTPR--VLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKR 216
+K K+ KK +T K ++ T + + K+R KK T KE+ E K K
Sbjct: 28 KKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKE 87
Query: 217 MKEAKEKRQEQIAKRRR 233
++ KEK +E+ K+++
Sbjct: 88 KEKEKEKEKEKKKKKKK 104
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 35.4 bits (80), Expect = 0.047
Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 18/148 (12%)
Query: 114 VKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKA 173
VK E P + P P++A + KE+ + PL ++ K P +
Sbjct: 761 VKSPEAKTPAKEEARSPADKFPEKAK------SPVKEEVKSPEKAKSPLKEDAKAPEKEI 814
Query: 174 PKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKR--------MKEAK---- 221
PK + + +P + K + + +K+ K +E+A K K+ KEA
Sbjct: 815 PKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKV 874
Query: 222 EKRQEQIAKRRRLSSLRASTSKSESSQK 249
E+++E ++ + S + A ++E +K
Sbjct: 875 EEKKEPAVEKPKESKVEAKKEEAEDKKK 902
Score = 28.1 bits (61), Expect = 7.5
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 148 SKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKN---KE 204
SK+++ + KP +E K+P + PK ++ + ++++ ++ KE
Sbjct: 859 SKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKE 918
Query: 205 EA--AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
+A E ++ K +AK K + A+++ + + T K E ++K
Sbjct: 919 DAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDT-KEEKAKK 964
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 35.4 bits (80), Expect = 0.047
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 167 KKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQE 226
KK + + K+Q L R Q +R + A ++QR ++ K++ E +L +R +E K +++E
Sbjct: 269 KKRQLERQKLQELEQQREEQKRREKEAEERQRAEERKQK--ELEELERERKREEKLRKRE 326
Query: 227 QIAKRRRLSSLRASTSKSESSQ 248
Q ++R LR + K E Q
Sbjct: 327 Q---KQRDRELRRNQKKLEKLQ 345
Score = 28.1 bits (61), Expect = 7.5
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 195 KKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
K+Q ++ +E + + +R KEA+E+++ + K++ L L + E +K
Sbjct: 270 KRQLERQKLQELEQQREEQKRREKEAEERQRAEERKQKELEELERERKREEKLRK 324
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 35.0 bits (79), Expect = 0.061
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEG--KKPRTKAPKIQRLVTPRVLQHK 188
R G K RK KE+ R+ R+ NKEG K+ R K K +R T + + +
Sbjct: 79 RERGKKEKKGERK-----KEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKER 133
Query: 189 RRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKR--RRLSSLRASTSKSES 246
R+ K++ K+ + + E K + KE K++ ++Q+ ++ R R K E
Sbjct: 134 ERKEERKREERKERERKKEEREK--ERERKERKKRERKQVGEKEEERKEKERKERKKRER 191
Query: 247 SQK 249
++K
Sbjct: 192 NRK 194
Score = 33.5 bits (75), Expect = 0.18
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 150 EDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEY 209
+ ++R+ KEGKK R K +R R + ++R +++R + KE+ E
Sbjct: 35 QSEIREREREIETRKEGKKERESERKKER----REREKRKREREKERKRERGKKEKKGER 90
Query: 210 AKLLAKRMKEAKEKR----QEQIAKRRRLSSLRASTSK 243
K +R K +EK +E+ ++++ R TSK
Sbjct: 91 KKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSK 128
Score = 32.7 bits (73), Expect = 0.30
Identities = 24/119 (20%), Positives = 51/119 (42%)
Query: 131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRR 190
R+ G K RK +E R+ + + K+ + + K +R R + + +
Sbjct: 48 RKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENK 107
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
K++R KK K+E +K +R ++ + KR+E+ + R+ + E ++
Sbjct: 108 EGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKR 166
Score = 30.0 bits (66), Expect = 2.0
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 148 SKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAA 207
SKE R+ RK K ++ + K +R + + K R+ +KQ +K +E
Sbjct: 127 SKEGKERE---RKEERKREERKERERKKEER---EKERERKERKKRERKQVGEKEEERKE 180
Query: 208 EYAKLLAKRMKEAKEKRQEQIAKRRR 233
+ K KR + KE+++E+ K RR
Sbjct: 181 KERKERKKRERNRKERKKERERKERR 206
Score = 28.1 bits (61), Expect = 7.5
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 115 KKGEKDIPGLTDTT-VPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKA 173
KK EK G T R +R RK KE+ ++ ++ +E K+ K
Sbjct: 116 KKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKE 175
Query: 174 PKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRR 233
+ + + +R R KK+R +K + E K+ ++ KE+R+++ K R+
Sbjct: 176 EERKEKERKERKKRERNRKERKKERERKERRER--------KKERKKKEERKKERQKDRQ 227
Query: 234 LSSLRASTSKSESSQK 249
+ K E ++
Sbjct: 228 TNWREKERGKRERKER 243
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 34.7 bits (78), Expect = 0.080
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 150 EDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEY 209
E++ + RK KE +K + K K T + K + KK++ K+ K++ E
Sbjct: 20 EEEEEKEGKRKEKRKEKRKEKEKKKK-----TKETEKRKEKEEEEKKRKRKRKKKKEEEE 74
Query: 210 AKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
+ + +E KE+ +++ +RR+ R + E +K
Sbjct: 75 REEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 33.9 bits (76), Expect = 0.14
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 134 GPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIA 193
G ++ R K K+ ++ RK +E KK + K K + + + R
Sbjct: 27 GKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKK--------EEEEREEE 78
Query: 194 LKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRR 233
+++ +K +EE E + K+ + KE+ +E+ KRRR
Sbjct: 79 EEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRR 118
Score = 30.4 bits (67), Expect = 1.5
Identities = 16/86 (18%), Positives = 41/86 (47%)
Query: 164 KEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEK 223
K+ KK + + + + + K + K++ +K KE+ + + ++ KE +EK
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60
Query: 224 RQEQIAKRRRLSSLRASTSKSESSQK 249
++++ K+++ R + E +K
Sbjct: 61 KRKRKRKKKKEEEEREEEEEEEEEEK 86
>gi|94721321 coiled-coil domain containing 11 [Homo sapiens]
Length = 514
Score = 34.7 bits (78), Expect = 0.080
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 109 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRI--RKLFNLSKEDDVRQYVVRKPLNKEG 166
LN+ +V++ +D+ D +R R +I + L +E+ ++ + L ++
Sbjct: 309 LNMKLVQRALQDLQEEADKKKQKREDMIREQKIYHKYLAQRREEEKAQEKEFDRILEEDK 368
Query: 167 KKPRTKAPKIQRL-------VTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKE 219
K + K RL + V+ ++ ++ K QR K +EE A K + + +KE
Sbjct: 369 AKKLAEKDKELRLEKEARRQLVDEVMCTRKLQVQEKLQREAKEQEERAMEQKHINESLKE 428
Query: 220 AKEKRQEQIAKRRRLS 235
+ +E A+R+RL+
Sbjct: 429 LNCEEKENFARRQRLA 444
Score = 29.6 bits (65), Expect = 2.6
Identities = 26/113 (23%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 125 TDTTVPRRLGPKRASRIRKLFNLSKE--DDVRQYVVRKPLNKEGKKPRTKAPKIQRLVT- 181
T+ + + ++ R+R+ L KE + RQ V + L+++ ++ R + +++ L
Sbjct: 114 TEMQLKKETIEEKKDRMREKTKLLKEKNEKERQDFVAEKLDQQFRE-RCEELRVELLSIH 172
Query: 182 -PRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRR 233
+V + ++ +IA ++ +++ E ++KL + + AKEKR+ Q A+R++
Sbjct: 173 QKKVCEERKAQIAFNEELSRQKLVEEQMFSKLWEED-RLAKEKREAQEARRQK 224
>gi|24308223 hypothetical protein LOC57577 [Homo sapiens]
Length = 936
Score = 34.7 bits (78), Expect = 0.080
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 159 RKPLNKEGKKPRTKAPK---IQRLVTPRVLQHKRRR------IALKKQRTKKNKEEAAEY 209
RKP P KA + IQR R+L K+++ LK Q ++ K EA E
Sbjct: 646 RKPKQLMTPHPILKAMEERAIQRAECRRILAEKKKKQEEEKLAQLKAQEEERQKREAEEK 705
Query: 210 AKLLAKRMKEAKEKRQEQIAKRRRL 234
L ++ +E + K+ +++ K++R+
Sbjct: 706 EAQLERKREEKRLKKMKELEKQKRI 730
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 34.3 bits (77), Expect = 0.10
Identities = 28/119 (23%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 135 PKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVL----QHKRR 190
P++ + N+ E +R+ +R L +E K+ R++A + Q+L+ + L ++KR+
Sbjct: 334 PEQEGEPSSIVNVPGESTLRRDFLR--LQQENKE-RSEALRRQQLLQEQQLREQEEYKRQ 390
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
+A +++R ++ KE+ +L ++ +E + +RQ++ +RRR + + E +K
Sbjct: 391 LLAERQKRIEQQKEQRR---RLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRK 446
Score = 32.0 bits (71), Expect = 0.52
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 136 KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALK 195
+R+ +R+ L ++ Q ++ L E +K R + K QR Q +R R A +
Sbjct: 365 ERSEALRRQQLLQEQQLREQEEYKRQLLAERQK-RIEQQKEQRRRLEE--QQRREREARR 421
Query: 196 KQRTKKNKEEAAEYAKL--LAKRMKEAKEKRQEQIAKRR 232
+Q ++ + E E +L L +R KE +E+R+ + KRR
Sbjct: 422 QQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRR 460
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 34.3 bits (77), Expect = 0.10
Identities = 28/119 (23%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 135 PKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVL----QHKRR 190
P++ + N+ E +R+ +R L +E K+ R++A + Q+L+ + L ++KR+
Sbjct: 334 PEQEGEPSSIVNVPGESTLRRDFLR--LQQENKE-RSEALRRQQLLQEQQLREQEEYKRQ 390
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
+A +++R ++ KE+ +L ++ +E + +RQ++ +RRR + + E +K
Sbjct: 391 LLAERQKRIEQQKEQRR---RLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRK 446
Score = 32.0 bits (71), Expect = 0.52
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 136 KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALK 195
+R+ +R+ L ++ Q ++ L E +K R + K QR Q +R R A +
Sbjct: 365 ERSEALRRQQLLQEQQLREQEEYKRQLLAERQK-RIEQQKEQRRRLEE--QQRREREARR 421
Query: 196 KQRTKKNKEEAAEYAKL--LAKRMKEAKEKRQEQIAKRR 232
+Q ++ + E E +L L +R KE +E+R+ + KRR
Sbjct: 422 QQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRR 460
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 34.3 bits (77), Expect = 0.10
Identities = 28/119 (23%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 135 PKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVL----QHKRR 190
P++ + N+ E +R+ +R L +E K+ R++A + Q+L+ + L ++KR+
Sbjct: 334 PEQEGEPSSIVNVPGESTLRRDFLR--LQQENKE-RSEALRRQQLLQEQQLREQEEYKRQ 390
Query: 191 RIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
+A +++R ++ KE+ +L ++ +E + +RQ++ +RRR + + E +K
Sbjct: 391 LLAERQKRIEQQKEQRR---RLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRK 446
Score = 32.0 bits (71), Expect = 0.52
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 136 KRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALK 195
+R+ +R+ L ++ Q ++ L E +K R + K QR Q +R R A +
Sbjct: 365 ERSEALRRQQLLQEQQLREQEEYKRQLLAERQK-RIEQQKEQRRRLEE--QQRREREARR 421
Query: 196 KQRTKKNKEEAAEYAKL--LAKRMKEAKEKRQEQIAKRR 232
+Q ++ + E E +L L +R KE +E+R+ + KRR
Sbjct: 422 QQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRR 460
>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
Length = 1989
Score = 34.3 bits (77), Expect = 0.10
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 164 KEGKKPRTKAPKIQRLVTPRVLQHKRRRI------ALKKQRTK------KNKEEAAEYAK 211
KE K+ TK +Q+ V H +++ AL+KQ+TK + KE+ + +
Sbjct: 395 KESKEKLTKTKTVQQKVKTSTKTHSAKKVSTTAKQALRKQQTKAWKKLQQQKEQERQKEE 454
Query: 212 LLAKRMKEA-KEKRQEQIAKRRRLSS 236
K+ +E + KR+E+I K R LS+
Sbjct: 455 DQRKQAEEEERRKREEEIRKIRDLSN 480
>gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens]
Length = 322
Score = 34.3 bits (77), Expect = 0.10
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 158 VRKPLNKEGKKPRTKAPKIQRLV-----TPRVLQHKRRRIALKKQRTKKNKEEAAEYAKL 212
V + L ++G RT +P + T + + K+ + KK++ K ++E AE
Sbjct: 127 VTRQLQEKGCGARTPSPSLSESSEDEKPTKKHKKDKKEKKKKKKEKEKADREVQAEQPSS 186
Query: 213 LAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249
+ R K KEK K +S RA S+ QK
Sbjct: 187 SSPRRKTVKEKDDTGPKKHSSKNSERAQKSEPREGQK 223
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 33.9 bits (76), Expect = 0.14
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 146 NLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEE 205
N S D V + R P + + +P +R + +H+ +++ ++ R K +E+
Sbjct: 260 NTSWGDIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEK 319
Query: 206 AAEYAKLLAKRMKEAKEKRQEQIAKRRRL 234
+ KLL +R K+ ++ ++E + +RRR+
Sbjct: 320 TLKLQKLL-EREKDVRKWKEELLDQRRRM 347
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 33.9 bits (76), Expect = 0.14
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 175 KIQRLVTPRVLQHKRRRIALKKQRTK-KNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRR 233
+I R V ++L KR + KKQ + K K E E + +R E + +++E+ K++
Sbjct: 802 QIARRVYRQLLAEKREQEEKKKQEEEEKKKREEEERERERERREAELRAQQEEETRKQQE 861
Query: 234 LSSLRASTSKSESSQK 249
L +L+ S ++E +++
Sbjct: 862 LEALQKSQKEAELTRE 877
Score = 28.1 bits (61), Expect = 7.5
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 179 LVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRR 233
L+ R L K+ I +KQ + + Y +LLA++ ++ ++K+QE+ K++R
Sbjct: 780 LLRRRFLHLKKAAIVFQKQL--RGQIARRVYRQLLAEKREQEEKKKQEEEEKKKR 832
>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
a [Homo sapiens]
Length = 1400
Score = 33.9 bits (76), Expect = 0.14
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 146 NLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEE 205
N S D V + R P + + +P +R + +H+ +++ ++ R K +E+
Sbjct: 506 NTSWGDIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEK 565
Query: 206 AAEYAKLLAKRMKEAKEKRQEQIAKRRRL 234
+ KLL +R K+ ++ ++E + +RRR+
Sbjct: 566 TLKLQKLL-EREKDVRKWKEELLDQRRRM 593
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,554,010
Number of Sequences: 37866
Number of extensions: 369000
Number of successful extensions: 3382
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 2605
Number of HSP's gapped (non-prelim): 750
length of query: 249
length of database: 18,247,518
effective HSP length: 100
effective length of query: 149
effective length of database: 14,460,918
effective search space: 2154676782
effective search space used: 2154676782
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.