Guide to the Human Genome
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Search of human proteins with 169790839

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169790839 solute carrier family 1 (glial high affinity
glutamate transporter), member 3 [Homo sapiens]
         (542 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169790839 solute carrier family 1 (glial high affinity glutam...  1045   0.0  
gi|4827012 solute carrier family 1 (high affinity aspartate/glut...   705   0.0  
gi|194239697 solute carrier family 1 (glutamate transporter), me...   521   e-148
gi|66773030 solute carrier family 1, member 1 [Homo sapiens]          509   e-144
gi|40254478 excitatory amino acid transporter 2 [Homo sapiens]        501   e-142
gi|21314632 solute carrier family 1, member 4 isoform 1 [Homo sa...   426   e-119
gi|5032093 solute carrier family 1 member 5 isoform 1 [Homo sapi...   409   e-114
gi|223468566 solute carrier family 1 member 5 isoform 3 [Homo sa...   311   1e-84
gi|207444683 solute carrier family 1, member 4 isoform 2 [Homo s...   307   2e-83
gi|223468564 solute carrier family 1 member 5 isoform 2 [Homo sa...   303   3e-82
gi|9790233 solute carrier organic anion transporter family, memb...    32   1.5  
gi|4557267 adrenergic, beta-3-, receptor [Homo sapiens]                32   1.9  
gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    31   3.3  
gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    31   3.3  
gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    31   3.3  
gi|50054473 olfactory receptor, family 2, subfamily G, member 2 ...    30   4.3  

>gi|169790839 solute carrier family 1 (glial high affinity glutamate
           transporter), member 3 [Homo sapiens]
          Length = 542

 Score = 1045 bits (2701), Expect = 0.0
 Identities = 542/542 (100%), Positives = 542/542 (100%)

Query: 1   MTKSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIV 60
           MTKSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIV
Sbjct: 1   MTKSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIV 60

Query: 61  GTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMG 120
           GTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMG
Sbjct: 61  GTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMG 120

Query: 121 MRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPP 180
           MRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPP
Sbjct: 121 MRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPP 180

Query: 181 NLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSEAMETLTRITEELVPVPGSVNG 240
           NLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSEAMETLTRITEELVPVPGSVNG
Sbjct: 181 NLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSEAMETLTRITEELVPVPGSVNG 240

Query: 241 VNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGK 300
           VNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGK
Sbjct: 241 VNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGK 300

Query: 301 IVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITAL 360
           IVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITAL
Sbjct: 301 IVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITAL 360

Query: 361 GTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFE 420
           GTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFE
Sbjct: 361 GTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFE 420

Query: 421 LNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRT 480
           LNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRT
Sbjct: 421 LNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRT 480

Query: 481 TTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQDNETEKPIDSET 540
           TTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQDNETEKPIDSET
Sbjct: 481 TTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQDNETEKPIDSET 540

Query: 541 KM 542
           KM
Sbjct: 541 KM 542


>gi|4827012 solute carrier family 1 (high affinity
           aspartate/glutamate transporter), member 6 [Homo
           sapiens]
          Length = 564

 Score =  705 bits (1820), Expect = 0.0
 Identities = 365/547 (66%), Positives = 440/547 (80%), Gaps = 27/547 (4%)

Query: 3   KSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGT 62
           + +G+     G ++R Q+ +++R L  + ++Q +T E V  +L RNAF+LLTV+AV++G 
Sbjct: 11  RESGQRLGRVGWLQRLQESLQQRALRTRLRLQTMTLEHVLRFLRRNAFILLTVSAVVIGV 70

Query: 63  ILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMR 122
            L F LRPY+++YR++KYFSFPGELLMRMLQMLVLPLI+SSLVTGMA+LD+KA+G+MGMR
Sbjct: 71  SLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLDNKATGRMGMR 130

Query: 123 AVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNL 182
           A VYYM TTIIAV IGI++V IIHPGKG+KE +HREG+I  +  ADAF+DLIRNMFPPNL
Sbjct: 131 AAVYYMVTTIIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMDLIRNMFPPNL 190

Query: 183 VEACFKQFKTNYEKR-----------------SFKVPIQANETLVGAVINNVSEAMETLT 225
           VEACFKQFKT Y  R                 S   P         + + NV+ A+ TL 
Sbjct: 191 VEACFKQFKTQYSTRVVTRTMVRTENGSEPGASMPPPFSVENGT--SFLENVTRALGTLQ 248

Query: 226 RIT--EELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVA 283
            +   EE VPVPGS NG+NALGLVVFS+ FG VIG MK +G+ LR+FFDSLNEAIMRLV 
Sbjct: 249 EMLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLNEAIMRLVG 308

Query: 284 VIMWYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRK 343
           +I+WYAPVGILFLIAGKI+EMEDM V+GGQL MYT+TVIVGL +HA IVLPL+YFLVT +
Sbjct: 309 IIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGIVLPLIYFLVTHR 368

Query: 344 NPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTA 403
           NP+ FIGG+LQALITA+GTSSSSATLPITF+CLEE  GVD+R+TRFVLPVGAT+NMDGTA
Sbjct: 369 NPFPFIGGMLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGATVNMDGTA 428

Query: 404 LYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTD 463
           LYEALAAIFIAQVNN+ELN GQI TISITATAAS+GAAGIPQAGLVTMVIVLTSVGLPT+
Sbjct: 429 LYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVLTSVGLPTE 488

Query: 464 DITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPY 523
           DITLIIAVDWFLDRLRT TNVLGDS+GA ++EHLS+ EL+ ++ E     +    + KPY
Sbjct: 489 DITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAE-----LTLPSLGKPY 543

Query: 524 Q-LIAQD 529
           + L+AQ+
Sbjct: 544 KSLMAQE 550


>gi|194239697 solute carrier family 1 (glutamate transporter),
           member 7 [Homo sapiens]
          Length = 560

 Score =  521 bits (1343), Expect = e-148
 Identities = 281/506 (55%), Positives = 356/506 (70%), Gaps = 36/506 (7%)

Query: 47  RNAFVLLTVTAVIVGTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVT 106
           RN  ++L+V +VIVG +LGF LR  R+S +E+ YF FPGELLMRML+M++LPL++SSL++
Sbjct: 16  RNGLLILSVLSVIVGCLLGFFLRTRRLSPQEISYFQFPGELLMRMLKMMILPLVVSSLMS 75

Query: 107 GMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGT-KENMHREGKIVRVT 165
           G+A+LD+K S ++G+  V YY+ TT +AV++GI +V IIHPG    KE   + GK + ++
Sbjct: 76  GLASLDAKTSSRLGVLTVAYYLWTTFMAVIVGIFMVSIIHPGSAAQKETTEQSGKPI-MS 134

Query: 166 AADAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKVPIQANET------LVGAVINNVSE 219
           +ADA LDLIRNMFP NLVEA FKQ++T          +   E       + G    N S 
Sbjct: 135 SADALLDLIRNMFPANLVEATFKQYRTKTTPVVKSPKVAPEEAPPRRILIYGVQEENGSH 194

Query: 220 AMETLTRITEELVPV----PGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLN 275
                  +T     V    PG+ +G+N LG+V FS   G ++G M + G  L  F   LN
Sbjct: 195 VQNFALDLTPPPEVVYKSEPGTSDGMNVLGIVFFSATMGIMLGRMGDSGAPLVSFCQCLN 254

Query: 276 EAIMRLVAVIMWYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPL 335
           E++M++VAV +WY P GI+FLIAGKI+EM+D   +G +L  Y+VTV+ GL++H + +LPL
Sbjct: 255 ESVMKIVAVAVWYFPFGIVFLIAGKILEMDDPRAVGKKLGFYSVTVVCGLVLHGLFILPL 314

Query: 336 LYFLVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGA 395
           LYF +T+KNP VFI G+LQAL+ AL TSSSSATLPITFKCL ENN +D+R+ RFVLPVGA
Sbjct: 315 LYFFITKKNPIVFIRGILQALLIALATSSSSATLPITFKCLLENNHIDRRIARFVLPVGA 374

Query: 396 TINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVL 455
           TINMDGTALYEA+AAIFIAQVNN+EL+FGQIITISITATAASIGAAGIPQAGLVTMVIVL
Sbjct: 375 TINMDGTALYEAVAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVL 434

Query: 456 TSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIE 515
           TSVGLPTDDITLIIAVDW LDR RT  NVLGD+L AGI+ H+ R +              
Sbjct: 435 TSVGLPTDDITLIIAVDWALDRFRTMINVLGDALAAGIMAHICRKD-------------- 480

Query: 516 ENEMKKPYQLIAQDNETEKPIDSETK 541
                      A+D  TEK +  ETK
Sbjct: 481 ----------FARDTGTEKLLPCETK 496


>gi|66773030 solute carrier family 1, member 1 [Homo sapiens]
          Length = 524

 Score =  509 bits (1312), Expect = e-144
 Identities = 272/495 (54%), Positives = 361/495 (72%), Gaps = 7/495 (1%)

Query: 42  KSYLFRNAFVLLTVTAVIVGTILGFTLRPY-RMSYREVKYFSFPGELLMRMLQMLVLPLI 100
           K +L  N  +L TV AV++G   G  +R +  +S  E  YF+FPGE+LMRML++++LPLI
Sbjct: 12  KRFLKNNWVLLSTVAAVVLGITTGVLVREHSNLSTLEKFYFAFPGEILMRMLKLIILPLI 71

Query: 101 ISSLVTGMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKEN-MHREG 159
           ISS++TG+AALDS  SGK+G+RAVVYY  TT+IAV++GI++V+ I PG   K   + R G
Sbjct: 72  ISSMITGVAALDSNVSGKIGLRAVVYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTG 131

Query: 160 KIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSE 219
               V+  DA LDLIRNMFP NLV+ACF+Q+KT  E+   K P      +       V  
Sbjct: 132 STPEVSTVDAMLDLIRNMFPENLVQACFQQYKTKREE--VKPPSDPEMNMTEESFTAVMT 189

Query: 220 AMETLTRITEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIM 279
              +  + T+E   V    +G+N LGL+VF + FG VIG M E+GQ L +FF++L++A M
Sbjct: 190 TAISKNK-TKEYKIVGMYSDGINVLGLIVFCLVFGLVIGKMGEKGQILVDFFNALSDATM 248

Query: 280 RLVAVIMWYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFL 339
           ++V +IM Y P+GILFLIAGKI+E+ED  +   +L +Y  TV+ GL IH++++LPL+YF+
Sbjct: 249 KIVQIIMCYMPLGILFLIAGKIIEVEDWEIFR-KLGLYMATVLTGLAIHSIVILPLIYFI 307

Query: 340 VTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINM 399
           V RKNP+ F  G+ QAL+TAL  SSSSATLP+TF+C EENN VDKR+TRFVLPVGATINM
Sbjct: 308 VVRKNPFRFAMGMAQALLTALMISSSSATLPVTFRCAEENNQVDKRITRFVLPVGATINM 367

Query: 400 DGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVG 459
           DGTALYEA+AA+FIAQ+N+ +L  GQIITISITAT+ASIGAAG+PQAGLVTMVIVL++VG
Sbjct: 368 DGTALYEAVAAVFIAQLNDLDLGIGQIITISITATSASIGAAGVPQAGLVTMVIVLSAVG 427

Query: 460 LPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEM 519
           LP +D+TLIIAVDW LDR RT  NVLGD+ G GIVE LS+ EL+  DV    +++    +
Sbjct: 428 LPAEDVTLIIAVDWLLDRFRTMVNVLGDAFGTGIVEKLSKKELEQMDVSSEVNIVNPFAL 487

Query: 520 KKPYQLIAQDNETEK 534
           +    L  +D++T+K
Sbjct: 488 ESTI-LDNEDSDTKK 501


>gi|40254478 excitatory amino acid transporter 2 [Homo sapiens]
          Length = 574

 Score =  501 bits (1290), Expect = e-142
 Identities = 269/500 (53%), Positives = 363/500 (72%), Gaps = 12/500 (2%)

Query: 45  LFRNAFVLLTVTAVIVGTILGFTLRPYRMSYREV-KYFSFPGELLMRMLQMLVLPLIISS 103
           L +N  + LTV  VI+G + G  LR     + +V    +FPG++LMRML+ML+LPLIISS
Sbjct: 41  LGKNLLLTLTVFGVILGAVCGGLLRLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISS 100

Query: 104 LVTGMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGT-KENMHREGKIV 162
           L+TG++ LD+KASG++G RA+VYYM+TTIIA V+G+I+V+ IHPG    K+ +    K  
Sbjct: 101 LITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKND 160

Query: 163 RVTAADAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSEAME 222
            V++ DAFLDLIRN+FP NLV+ACF+Q +T  +K     P         AV++ ++E   
Sbjct: 161 EVSSLDAFLDLIRNLFPENLVQACFQQIQTVTKKVLVAPPPDEEANATSAVVSLLNE--- 217

Query: 223 TLTRITEELVPVPGS----VNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAI 278
           T+T + EE   V        +G+N LGL+ F + FG  +G M +Q + + +FF+ LNE +
Sbjct: 218 TVTEVPEETKMVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGDQAKLMVDFFNILNEIV 277

Query: 279 MRLVAVIMWYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYF 338
           M+LV +IMWY+P+GI  LI GKI+ ++D+ V+  QL MY VTVI+GL+IH  I LPL+YF
Sbjct: 278 MKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMVTVIIGLIIHGGIFLPLIYF 337

Query: 339 LVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATIN 398
           +VTRKNP+ F  G+ QA ITALGT+SS+ TLP+TF+CLEEN G+DKRVTRFVLPVGATIN
Sbjct: 338 VVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATIN 397

Query: 399 MDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSV 458
           MDGTALYEA+AAIFIAQ+N   L+ GQI+T+S+TAT AS+GAA IP AGLVTM+++LT+V
Sbjct: 398 MDGTALYEAVAAIFIAQMNGVVLDGGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAV 457

Query: 459 GLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENE 518
           GLPT+DI+L++AVDW LDR+RT+ NV+GDS GAGIV HLS+ EL   D +  + V E+ E
Sbjct: 458 GLPTEDISLLVAVDWLLDRMRTSVNVVGDSFGAGIVYHLSKSELDTIDSQ--HRVHEDIE 515

Query: 519 MKKPYQLIAQDNETEKPIDS 538
           M K  Q I  D +  +  +S
Sbjct: 516 MTKT-QSIYDDMKNHRESNS 534


>gi|21314632 solute carrier family 1, member 4 isoform 1 [Homo
           sapiens]
          Length = 532

 Score =  426 bits (1096), Expect = e-119
 Identities = 222/479 (46%), Positives = 311/479 (64%), Gaps = 28/479 (5%)

Query: 44  YLFRNAFVLLTVTAVIVGTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISS 103
           +L R A VLLTV+ V+ G  LG  LR   +S  +V Y +FPGE+L+RML+M++LPL++ S
Sbjct: 38  FLRRQALVLLTVSGVLAGAGLGAALRGLSLSRTQVTYLAFPGEMLLRMLRMIILPLVVCS 97

Query: 104 LVTGMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKI-- 161
           LV+G A+LD+   G++G  AV Y+  TT+ A  + + +  II PG G +     +  +  
Sbjct: 98  LVSGAASLDASCLGRLGGIAVAYFGLTTLSASALAVALAFIIKPGSGAQTLQSSDLGLED 157

Query: 162 -----VRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINN 216
                V     D+FLDL RN+FP NLV A F+ + T+Y+                 V  N
Sbjct: 158 SGPPPVPKETVDSFLDLARNLFPSNLVVAAFRTYATDYK----------------VVTQN 201

Query: 217 VSEAMETLTRITEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNE 276
            S        +T E +P+   + G+N LGLV+F++  G  +  +  +G+ L  FF+SLNE
Sbjct: 202 SSSG-----NVTHEKIPIGTEIEGMNILGLVLFALVLGVALKKLGSEGEDLIRFFNSLNE 256

Query: 277 AIMRLVAVIMWYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLL 336
           A M LV+ IMWY PVGI+FL+  KIVEM+D+ V+   L  Y    I+G +IH  IVLPL+
Sbjct: 257 ATMVLVSWIMWYVPVGIMFLVGSKIVEMKDIIVLVTSLGKYIFASILGHVIHGGIVLPLI 316

Query: 337 YFLVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGAT 396
           YF+ TRKNP+ F+ GLL    TA  T SSSATLP   KC+EENNGVDKR++RF+LP+GAT
Sbjct: 317 YFVFTRKNPFRFLLGLLAPFATAFATCSSSATLPSMMKCIEENNGVDKRISRFILPIGAT 376

Query: 397 INMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLT 456
           +NMDG A+++ +AA+FIAQ+NN ELN GQI TI +TATA+S+GAAG+P  G++T+ I+L 
Sbjct: 377 VNMDGAAIFQCVAAVFIAQLNNVELNAGQIFTILVTATASSVGAAGVPAGGVLTIAIILE 436

Query: 457 SVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIE 515
           ++GLPT D+ LI+AVDW +DR  T  NV GD+LGAGI+ HL++   K  + E+    +E
Sbjct: 437 AIGLPTHDLPLILAVDWIVDRTTTVVNVEGDALGAGILHHLNQKATKKGEQELAEVKVE 495


>gi|5032093 solute carrier family 1 member 5 isoform 1 [Homo
           sapiens]
          Length = 541

 Score =  409 bits (1051), Expect = e-114
 Identities = 221/489 (45%), Positives = 319/489 (65%), Gaps = 47/489 (9%)

Query: 37  TKEDVKSYLFRNAFVLLTVTAVIVGTILGF---------TLRPYRMSYREVKYFSFPGEL 87
           +++ V+  L  N  VLLTV AV+ G  LG           L P R+S      F FPGEL
Sbjct: 41  SRDQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGALALGPERLSA-----FVFPGEL 95

Query: 88  LMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHP 147
           L+R+L+M++LPL++ SL+ G A+LD  A G++G  A+++++ TT++A  +G+ + + + P
Sbjct: 96  LLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQP 155

Query: 148 GKGTKENMHREGKIVRVTAA------DAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKV 201
           G  +       G       A      D+FLDL RN+FP NLV A F+ + T YE+R+   
Sbjct: 156 GAASAAINASVGAAGSAENAPSKEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNI-- 213

Query: 202 PIQANETLVGAVINNVSEAMETLTRITEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMK 261
                                T TR+    VPV   V G+N LGLVVF++ FG  +  + 
Sbjct: 214 ---------------------TGTRVK---VPVGQEVEGMNILGLVVFAIVFGVALRKLG 249

Query: 262 EQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTV 321
            +G+ L  FF+S NEA M LV+ IMWYAPVGI+FL+AGKIVEMED+G++  +L  Y +  
Sbjct: 250 PEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCC 309

Query: 322 IVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNG 381
           ++G  IH ++VLPL+YFL TRKNP+ F+ G++  L TA GTSSSSATLP+  KC+EENNG
Sbjct: 310 LLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNG 369

Query: 382 VDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAA 441
           V K ++RF+LP+GAT+NMDG AL++ +AA+FIAQ++   L+F +IITI +TATA+S+GAA
Sbjct: 370 VAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAA 429

Query: 442 GIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVE-HLSRH 500
           GIP  G++T+ I+L +V LP D I+LI+AVDW +DR  T  NV GD+LGAG+++ ++ R 
Sbjct: 430 GIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRT 489

Query: 501 ELKNRDVEM 509
           E ++ + E+
Sbjct: 490 ESRSTEPEL 498


>gi|223468566 solute carrier family 1 member 5 isoform 3 [Homo
           sapiens]
          Length = 339

 Score =  311 bits (797), Expect = 1e-84
 Identities = 153/283 (54%), Positives = 214/283 (75%), Gaps = 1/283 (0%)

Query: 228 TEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMW 287
           T   VPV   V G+N LGLVVF++ FG  +  +  +G+ L  FF+S NEA M LV+ IMW
Sbjct: 14  TRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMW 73

Query: 288 YAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWV 347
           YAPVGI+FL+AGKIVEMED+G++  +L  Y +  ++G  IH ++VLPL+YFL TRKNP+ 
Sbjct: 74  YAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYR 133

Query: 348 FIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEA 407
           F+ G++  L TA GTSSSSATLP+  KC+EENNGV K ++RF+LP+GAT+NMDG AL++ 
Sbjct: 134 FLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQC 193

Query: 408 LAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITL 467
           +AA+FIAQ++   L+F +IITI +TATA+S+GAAGIP  G++T+ I+L +V LP D I+L
Sbjct: 194 VAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISL 253

Query: 468 IIAVDWFLDRLRTTTNVLGDSLGAGIVE-HLSRHELKNRDVEM 509
           I+AVDW +DR  T  NV GD+LGAG+++ ++ R E ++ + E+
Sbjct: 254 ILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRTESRSTEPEL 296


>gi|207444683 solute carrier family 1, member 4 isoform 2 [Homo
           sapiens]
          Length = 312

 Score =  307 bits (786), Expect = 2e-83
 Identities = 149/275 (54%), Positives = 202/275 (73%)

Query: 241 VNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGK 300
           +N LGLV+F++  G  +  +  +G+ L  FF+SLNEA M LV+ IMWY PVGI+FL+  K
Sbjct: 1   MNILGLVLFALVLGVALKKLGSEGEDLIRFFNSLNEATMVLVSWIMWYVPVGIMFLVGSK 60

Query: 301 IVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITAL 360
           IVEM+D+ V+   L  Y    I+G +IH  IVLPL+YF+ TRKNP+ F+ GLL    TA 
Sbjct: 61  IVEMKDIIVLVTSLGKYIFASILGHVIHGGIVLPLIYFVFTRKNPFRFLLGLLAPFATAF 120

Query: 361 GTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFE 420
            T SSSATLP   KC+EENNGVDKR++RF+LP+GAT+NMDG A+++ +AA+FIAQ+NN E
Sbjct: 121 ATCSSSATLPSMMKCIEENNGVDKRISRFILPIGATVNMDGAAIFQCVAAVFIAQLNNVE 180

Query: 421 LNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRT 480
           LN GQI TI +TATA+S+GAAG+P  G++T+ I+L ++GLPT D+ LI+AVDW +DR  T
Sbjct: 181 LNAGQIFTILVTATASSVGAAGVPAGGVLTIAIILEAIGLPTHDLPLILAVDWIVDRTTT 240

Query: 481 TTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIE 515
             NV GD+LGAGI+ HL++   K  + E+    +E
Sbjct: 241 VVNVEGDALGAGILHHLNQKATKKGEQELAEVKVE 275


>gi|223468564 solute carrier family 1 member 5 isoform 2 [Homo
           sapiens]
          Length = 313

 Score =  303 bits (775), Expect = 3e-82
 Identities = 147/270 (54%), Positives = 208/270 (77%), Gaps = 1/270 (0%)

Query: 241 VNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGK 300
           +N LGLVVF++ FG  +  +  +G+ L  FF+S NEA M LV+ IMWYAPVGI+FL+AGK
Sbjct: 1   MNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGK 60

Query: 301 IVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITAL 360
           IVEMED+G++  +L  Y +  ++G  IH ++VLPL+YFL TRKNP+ F+ G++  L TA 
Sbjct: 61  IVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAF 120

Query: 361 GTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFE 420
           GTSSSSATLP+  KC+EENNGV K ++RF+LP+GAT+NMDG AL++ +AA+FIAQ++   
Sbjct: 121 GTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQS 180

Query: 421 LNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRT 480
           L+F +IITI +TATA+S+GAAGIP  G++T+ I+L +V LP D I+LI+AVDW +DR  T
Sbjct: 181 LDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCT 240

Query: 481 TTNVLGDSLGAGIVE-HLSRHELKNRDVEM 509
             NV GD+LGAG+++ ++ R E ++ + E+
Sbjct: 241 VLNVEGDALGAGLLQNYVDRTESRSTEPEL 270


>gi|9790233 solute carrier organic anion transporter family, member
           1B3 [Homo sapiens]
          Length = 702

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 52  LLTVTAVIVGTILG-FTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISS 103
           ++T+  V  G  LG F ++ +++S   +  FSF   ++  + Q+L  PLI  S
Sbjct: 380 IITIPTVATGMFLGGFIIKKFKLSLVGIAKFSFLTSMISFLFQLLYFPLICES 432


>gi|4557267 adrenergic, beta-3-, receptor [Homo sapiens]
          Length = 408

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 8/62 (12%)

Query: 434 TAASIGAAGIPQ----AGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSL 489
           TA + G  G+P     AG +  + VL +VG    ++ +I+A+ W   RL+T TNV   SL
Sbjct: 24  TANTSGLPGVPWEAALAGALLALAVLATVG---GNLLVIVAIAW-TPRLQTMTNVFVTSL 79

Query: 490 GA 491
            A
Sbjct: 80  AA 81


>gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4470

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 11/85 (12%)

Query: 136  VIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYE 195
            V   ++++    GK  K+   +  KI+ +   D FLD ++     ++ EAC K FK    
Sbjct: 3172 VTAAVMILTAPGGKIPKDKSWKAAKIM-MGKVDTFLDSLKKFDKEHIPEACLKAFK---- 3226

Query: 196  KRSFKVPIQANETLVGAVINNVSEA 220
                  P Q N T     I + S A
Sbjct: 3227 ------PYQGNPTFDPEFIRSKSTA 3245


>gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4485

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 11/85 (12%)

Query: 136  VIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYE 195
            V   ++++    GK  K+   +  KI+ +   D FLD ++     ++ EAC K FK    
Sbjct: 3150 VTAAVMILTAPGGKIPKDKSWKAAKIM-MGKVDTFLDSLKKFDKEHIPEACLKAFK---- 3204

Query: 196  KRSFKVPIQANETLVGAVINNVSEA 220
                  P Q N T     I + S A
Sbjct: 3205 ------PYQGNPTFDPEFIRSKSTA 3223


>gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4485

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 11/85 (12%)

Query: 136  VIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYE 195
            V   ++++    GK  K+   +  KI+ +   D FLD ++     ++ EAC K FK    
Sbjct: 3150 VTAAVMILTAPGGKIPKDKSWKAAKIM-MGKVDTFLDSLKKFDKEHIPEACLKAFK---- 3204

Query: 196  KRSFKVPIQANETLVGAVINNVSEA 220
                  P Q N T     I + S A
Sbjct: 3205 ------PYQGNPTFDPEFIRSKSTA 3223


>gi|50054473 olfactory receptor, family 2, subfamily G, member 2
           [Homo sapiens]
          Length = 317

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 46  FRNAFVLLTVTAVIVGTILGFTLRPYRMSYREV-KYFSFPGELLMRMLQMLVLPLIISSL 104
           F   F  LTV  +  GTI+   L+P +   R+  K+ S    ++ RML  L+  L I  +
Sbjct: 241 FGTCFSHLTVVTIFYGTIIFMYLQPAKSRSRDQGKFVSLFYTVVTRMLNPLIYTLRIKEV 300

Query: 105 VTGMAALDSKASG 117
              +  + +KA G
Sbjct: 301 KGALKKVLAKALG 313


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,828,539
Number of Sequences: 37866
Number of extensions: 646300
Number of successful extensions: 1678
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1649
Number of HSP's gapped (non-prelim): 18
length of query: 542
length of database: 18,247,518
effective HSP length: 107
effective length of query: 435
effective length of database: 14,195,856
effective search space: 6175197360
effective search space used: 6175197360
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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