Search of human proteins with 169234964

Search of human proteins with 169234964

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169234964 hypothetical protein LOC120400 [Homo sapiens]
         (405 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169234964 hypothetical protein LOC120400 [Homo sapiens]            842   0.0  
gi|210147446 hypothetical protein LOC120406 [Homo sapiens]            611   e-175
gi|117647230 hypothetical protein LOC54827 isoform 1 [Homo sapiens]   545   e-155
gi|117647228 hypothetical protein LOC54827 isoform 2 [Homo sapiens]   311   7e-85
gi|21450781 hypothetical protein LOC91775 [Homo sapiens]              223   2e-58
gi|197333800 hypothetical protein LOC91775 [Homo sapiens]             223   2e-58
gi|217330576 neurexophilin 3 [Homo sapiens]                            32   0.79 
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]    30   5.1  
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]    30   5.1  
gi|32454739 tripartite motif-containing 3 [Homo sapiens]               29   6.7  
gi|32454737 tripartite motif-containing 3 [Homo sapiens]               29   6.7  
gi|170784865 CAS1 domain containing 1 [Homo sapiens]                   29   6.7  
gi|23097338 neurexophilin 1 precursor [Homo sapiens]                   29   8.7  

>gi|169234964 hypothetical protein LOC120400 [Homo sapiens]
          Length = 405

 Score =  842 bits (2176), Expect = 0.0
 Identities = 405/405 (100%), Positives = 405/405 (100%)

Query: 1   MSSPALTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGASALWRARNQGYDK 60
           MSSPALTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGASALWRARNQGYDK
Sbjct: 1   MSSPALTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGASALWRARNQGYDK 60

Query: 61  IIFKGKFVNGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYCMKPQHMPCEALTYMTTRN 120
           IIFKGKFVNGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYCMKPQHMPCEALTYMTTRN
Sbjct: 61  IIFKGKFVNGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYCMKPQHMPCEALTYMTTRN 120

Query: 121 REVSYLTDKENSLFHRSKVGVEMMKDRKHIDVTNCNKREKIEETCQVGMKPPVPGGYTLQ 180
           REVSYLTDKENSLFHRSKVGVEMMKDRKHIDVTNCNKREKIEETCQVGMKPPVPGGYTLQ
Sbjct: 121 REVSYLTDKENSLFHRSKVGVEMMKDRKHIDVTNCNKREKIEETCQVGMKPPVPGGYTLQ 180

Query: 181 GKWITTFCNQVQLDTIKINGCLKGKLIYLLGDSTLRQWIYYFPKVVKTLKFFDLHETGIF 240
           GKWITTFCNQVQLDTIKINGCLKGKLIYLLGDSTLRQWIYYFPKVVKTLKFFDLHETGIF
Sbjct: 181 GKWITTFCNQVQLDTIKINGCLKGKLIYLLGDSTLRQWIYYFPKVVKTLKFFDLHETGIF 240

Query: 241 KKHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDYIPREIDRLSGDKNTAIVITFGQHF 300
           KKHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDYIPREIDRLSGDKNTAIVITFGQHF
Sbjct: 241 KKHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDYIPREIDRLSGDKNTAIVITFGQHF 300

Query: 301 RPFPIDIFIRRAIGVQKAIERLFLRSPATKVIIKTENIREMHIETERFGDFHGYIHYLIM 360
           RPFPIDIFIRRAIGVQKAIERLFLRSPATKVIIKTENIREMHIETERFGDFHGYIHYLIM
Sbjct: 301 RPFPIDIFIRRAIGVQKAIERLFLRSPATKVIIKTENIREMHIETERFGDFHGYIHYLIM 360

Query: 361 KDIFKDLNVGIIDAWDMTIAYGTDTIHPPDHVIGNQINMFLNYIC 405
           KDIFKDLNVGIIDAWDMTIAYGTDTIHPPDHVIGNQINMFLNYIC
Sbjct: 361 KDIFKDLNVGIIDAWDMTIAYGTDTIHPPDHVIGNQINMFLNYIC 405


>gi|210147446 hypothetical protein LOC120406 [Homo sapiens]
          Length = 559

 Score =  611 bits (1576), Expect = e-175
 Identities = 294/406 (72%), Positives = 336/406 (82%), Gaps = 1/406 (0%)

Query: 1   MSSPALTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGASALWRARNQGYDK 60
           M S AL AGASGKV DFNNGTYLVSFTLFWEGQVSLSLLLIHPSEG SALWRARNQG D+
Sbjct: 154 MYSTALMAGASGKVTDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGVSALWRARNQGCDR 213

Query: 61  IIFKGKFVNGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYCMKPQHMPCEALTYMTTRN 120
           IIF G F N +S+VFTECGLTLN+NAELC+Y+DDRDQEAFYC++PQHMPCEALT+MTTR 
Sbjct: 214 IIFTGLFANRSSNVFTECGLTLNTNAELCQYMDDRDQEAFYCVRPQHMPCEALTHMTTRT 273

Query: 121 REVSYLTDKENSLFHRSKVGVEMMKDRKHIDVTNCNKREKIEETCQVGMKPPVPGGYTLQ 180
           R +SYL+ +E  LFHRS +GVEMMK+   I+V  CNK E I++ CQ+GMK P P GYTL+
Sbjct: 274 RNISYLSKEEWRLFHRSNIGVEMMKNFTPIEVIPCNKSENIKKNCQIGMKTPFPSGYTLK 333

Query: 181 GKWITTFCNQVQLDTIK-INGCLKGKLIYLLGDSTLRQWIYYFPKVVKTLKFFDLHETGI 239
             WIT FC Q++ +  K IN CL+ KLIYL+GDSTL QWIYY  K VKTLK+FD H  GI
Sbjct: 334 KMWITAFCKQIKFNETKNINDCLERKLIYLMGDSTLHQWIYYLQKAVKTLKYFDHHGAGI 393

Query: 240 FKKHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDYIPREIDRLSGDKNTAIVITFGQH 299
           FK H+LLD ERH  IQWKKH +PFVT +L+S+ D +YIPREID+++GDKNTAIVIT GQH
Sbjct: 394 FKTHVLLDVERHILIQWKKHGHPFVTKKLFSVKDENYIPREIDQVAGDKNTAIVITLGQH 453

Query: 300 FRPFPIDIFIRRAIGVQKAIERLFLRSPATKVIIKTENIREMHIETERFGDFHGYIHYLI 359
           FRPFPI+IFIRRAI +QKAIERLFLRSP TKVI+KTEN RE+    E F DFHGYI  LI
Sbjct: 454 FRPFPINIFIRRAINIQKAIERLFLRSPETKVILKTENTREIEQNAEMFSDFHGYIQNLI 513

Query: 360 MKDIFKDLNVGIIDAWDMTIAYGTDTIHPPDHVIGNQINMFLNYIC 405
           ++DIF DLNVGIIDAWDMTIAY T+  HPPD+VI NQI MFLNYIC
Sbjct: 514 IRDIFVDLNVGIIDAWDMTIAYCTNNAHPPDYVIQNQIGMFLNYIC 559


>gi|117647230 hypothetical protein LOC54827 isoform 1 [Homo sapiens]
          Length = 544

 Score =  545 bits (1403), Expect = e-155
 Identities = 258/406 (63%), Positives = 318/406 (78%), Gaps = 4/406 (0%)

Query: 1   MSSPALTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGASALWRARNQGYDK 60
           MSSPAL AGASGKV DFNNGTYLVSFTLFWEGQVSLSLLLIHPSEG SALW ARNQGYD+
Sbjct: 142 MSSPALMAGASGKVTDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGVSALWSARNQGYDR 201

Query: 61  IIFKGKFVNGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYCMKPQHMPCEALTYMTTRN 120
           +IF G+FVNGTS V +ECGL LN+NAELC+YLD+RDQE FYC++PQHMPC ALT+M ++N
Sbjct: 202 VIFTGQFVNGTSQVHSECGLILNTNAELCQYLDNRDQEGFYCVRPQHMPCAALTHMYSKN 261

Query: 121 REVSYLTDKENSLFHRSKVGVEMMKDRKHIDVTNCNKRE-KIEETCQVGMKPPVPGGYTL 179
           ++VSYL+ +E SLF RS VGVE+M+    I V+ CNK    ++E C+ GM   +P G+  
Sbjct: 262 KKVSYLSKQEKSLFERSNVGVEIMEKFNTISVSKCNKETVAMKEKCKFGMTSTIPSGHVW 321

Query: 180 QGKWITTFCNQVQLDTIKINGCLKGKLIYLLGDSTLRQWIYYFPKVVKTLKFFDLHETGI 239
           +  W    C+   L T+K+  CL+GKLIYL+GDST+RQW+ YF   + TLK  DLHE+G 
Sbjct: 322 RNTWNPVSCS---LATVKMKECLRGKLIYLMGDSTIRQWMEYFKASINTLKSVDLHESGK 378

Query: 240 FKKHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDYIPREIDRLSGDKNTAIVITFGQH 299
            +  L +D +R+  IQW+K+ YP +    YS+ + +Y+ R IDR  G+KNT IVI+ GQH
Sbjct: 379 LQHQLAVDLDRNINIQWQKYCYPLIGSMTYSVKEMEYLTRAIDRTGGEKNTVIVISLGQH 438

Query: 300 FRPFPIDIFIRRAIGVQKAIERLFLRSPATKVIIKTENIREMHIETERFGDFHGYIHYLI 359
           FRPFPID+FIRRA+ V KAI+ L LRSP T VIIKTENIREM+ + ERF DFHGYI YLI
Sbjct: 439 FRPFPIDVFIRRALNVHKAIQHLLLRSPDTMVIIKTENIREMYNDAERFSDFHGYIQYLI 498

Query: 360 MKDIFKDLNVGIIDAWDMTIAYGTDTIHPPDHVIGNQINMFLNYIC 405
           +KDIF+DL+V IIDAWD+TIAYGT+ +HPP HV+GNQIN+ LNYIC
Sbjct: 499 IKDIFQDLSVSIIDAWDITIAYGTNNVHPPQHVVGNQINILLNYIC 544


>gi|117647228 hypothetical protein LOC54827 isoform 2 [Homo sapiens]
          Length = 260

 Score =  311 bits (797), Expect = 7e-85
 Identities = 146/257 (56%), Positives = 188/257 (73%), Gaps = 4/257 (1%)

Query: 150 IDVTNCNKRE-KIEETCQVGMKPPVPGGYTLQGKWITTFCNQVQLDTIKINGCLKGKLIY 208
           I V+ CNK    ++E C+ GM   +P G+  +  W    C+   L T+K+  CL+GKLIY
Sbjct: 7   ISVSKCNKETVAMKEKCKFGMTSTIPSGHVWRNTWNPVSCS---LATVKMKECLRGKLIY 63

Query: 209 LLGDSTLRQWIYYFPKVVKTLKFFDLHETGIFKKHLLLDAERHTQIQWKKHSYPFVTFQL 268
           L+GDST+RQW+ YF   + TLK  DLHE+G  +  L +D +R+  IQW+K+ YP +    
Sbjct: 64  LMGDSTIRQWMEYFKASINTLKSVDLHESGKLQHQLAVDLDRNINIQWQKYCYPLIGSMT 123

Query: 269 YSLIDHDYIPREIDRLSGDKNTAIVITFGQHFRPFPIDIFIRRAIGVQKAIERLFLRSPA 328
           YS+ + +Y+ R IDR  G+KNT IVI+ GQHFRPFPID+FIRRA+ V KAI+ L LRSP 
Sbjct: 124 YSVKEMEYLTRAIDRTGGEKNTVIVISLGQHFRPFPIDVFIRRALNVHKAIQHLLLRSPD 183

Query: 329 TKVIIKTENIREMHIETERFGDFHGYIHYLIMKDIFKDLNVGIIDAWDMTIAYGTDTIHP 388
           T VIIKTENIREM+ + ERF DFHGYI YLI+KDIF+DL+V IIDAWD+TIAYGT+ +HP
Sbjct: 184 TMVIIKTENIREMYNDAERFSDFHGYIQYLIIKDIFQDLSVSIIDAWDITIAYGTNNVHP 243

Query: 389 PDHVIGNQINMFLNYIC 405
           P HV+GNQIN+ LNYIC
Sbjct: 244 PQHVVGNQINILLNYIC 260


>gi|21450781 hypothetical protein LOC91775 [Homo sapiens]
          Length = 559

 Score =  223 bits (569), Expect = 2e-58
 Identities = 133/406 (32%), Positives = 217/406 (53%), Gaps = 9/406 (2%)

Query: 6   LTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGASALWRARNQGYDKIIFKG 65
           L AGA G+V+D+ NG Y V FTL W G+V +S+ L+HPSEG   L R +    D++ FK 
Sbjct: 153 LQAGAVGRVVDYQNGFYKVFFTLLWPGKVKVSVSLVHPSEGIRVLQRLQEDKPDRVYFKS 212

Query: 66  KFVNGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYCMKPQHMPCEA-LTYMTTRNREVS 124
            F +G     TEC + L  N  LC + D    E ++C KP+ +PC + +T+   +   + 
Sbjct: 213 LFRSGRISETTECNVCLPGNLPLCNFTDLYTGEPWFCFKPKKLPCSSRITHF--KGGYLK 270

Query: 125 YLTDKENSLFHRSKVGVEMMKDRKHID-VTNCNKREKIEETCQVGM-KPPVPGGYTLQGK 182
            L     S F +S V ++M  +    D VT   +R K   + ++       P GY  + +
Sbjct: 271 GLLTAAESAFFQSGVNIKMPVNSSGPDWVTVIPRRIKETNSLELSQGSGTFPSGYYYKDQ 330

Query: 183 WITTFCNQVQL-DTIKINGCLKGKLIYLLGDSTLRQWIYYFPKVVKTLKFFDLHETGIFK 241
           W        Q  D   I  CL+ K+++L GDST+RQW  Y    V  L  F+L       
Sbjct: 331 WRPRKFKMRQFNDPDNITECLQRKVVHLFGDSTIRQWFEYLTTFVPDLVEFNLGSPKNVG 390

Query: 242 KHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDYIPREIDRLSGDKNTAIVITFGQHFR 301
             L +D + +  ++++ H  P     ++S   H Y+  E++ + G KNT + I    HF 
Sbjct: 391 PFLAVDQKHNILLKYRCHGPPIRFTTVFSNELH-YVANELNGIVGGKNTVVAIAVWSHFS 449

Query: 302 PFPIDIFIRRAIGVQKAIERLFLRSPATKVIIKTENIREMHIETERF-GDFHGYIHYLIM 360
            FP++++IRR   +++A+ RL  RSP T V+I+T N +E+  E   F  D++ +    I+
Sbjct: 450 TFPLEVYIRRLRNIRRAVVRLLDRSPKTVVVIRTANAQELGPEVSLFNSDWYNFQLDTIL 509

Query: 361 KDIFKDLNVGIIDAWDMTIA-YGTDTIHPPDHVIGNQINMFLNYIC 405
           + +F  + V ++DAW+MT+A Y    +HP + ++ NQ++MFL+++C
Sbjct: 510 RRMFSGVGVYLVDAWEMTLAHYLPHKLHPDEVIVKNQLDMFLSFVC 555


>gi|197333800 hypothetical protein LOC91775 [Homo sapiens]
          Length = 559

 Score =  223 bits (569), Expect = 2e-58
 Identities = 133/406 (32%), Positives = 217/406 (53%), Gaps = 9/406 (2%)

Query: 6   LTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSEGASALWRARNQGYDKIIFKG 65
           L AGA G+V+D+ NG Y V FTL W G+V +S+ L+HPSEG   L R +    D++ FK 
Sbjct: 153 LQAGAVGRVVDYQNGFYKVFFTLLWPGKVKVSVSLVHPSEGIRVLQRLQEDKPDRVYFKS 212

Query: 66  KFVNGTSHVFTECGLTLNSNAELCEYLDDRDQEAFYCMKPQHMPCEA-LTYMTTRNREVS 124
            F +G     TEC + L  N  LC + D    E ++C KP+ +PC + +T+   +   + 
Sbjct: 213 LFRSGRISETTECNVCLPGNLPLCNFTDLYTGEPWFCFKPKKLPCSSRITHF--KGGYLK 270

Query: 125 YLTDKENSLFHRSKVGVEMMKDRKHID-VTNCNKREKIEETCQVGM-KPPVPGGYTLQGK 182
            L     S F +S V ++M  +    D VT   +R K   + ++       P GY  + +
Sbjct: 271 GLLTAAESAFFQSGVNIKMPVNSSGPDWVTVIPRRIKETNSLELSQGSGTFPSGYYYKDQ 330

Query: 183 WITTFCNQVQL-DTIKINGCLKGKLIYLLGDSTLRQWIYYFPKVVKTLKFFDLHETGIFK 241
           W        Q  D   I  CL+ K+++L GDST+RQW  Y    V  L  F+L       
Sbjct: 331 WRPRKFKMRQFNDPDNITECLQRKVVHLFGDSTIRQWFEYLTTFVPDLVEFNLGSPKNVG 390

Query: 242 KHLLLDAERHTQIQWKKHSYPFVTFQLYSLIDHDYIPREIDRLSGDKNTAIVITFGQHFR 301
             L +D + +  ++++ H  P     ++S   H Y+  E++ + G KNT + I    HF 
Sbjct: 391 PFLAVDQKHNILLKYRCHGPPIRFTTVFSNELH-YVANELNGIVGGKNTVVAIAVWSHFS 449

Query: 302 PFPIDIFIRRAIGVQKAIERLFLRSPATKVIIKTENIREMHIETERF-GDFHGYIHYLIM 360
            FP++++IRR   +++A+ RL  RSP T V+I+T N +E+  E   F  D++ +    I+
Sbjct: 450 TFPLEVYIRRLRNIRRAVVRLLDRSPKTVVVIRTANAQELGPEVSLFNSDWYNFQLDTIL 509

Query: 361 KDIFKDLNVGIIDAWDMTIA-YGTDTIHPPDHVIGNQINMFLNYIC 405
           + +F  + V ++DAW+MT+A Y    +HP + ++ NQ++MFL+++C
Sbjct: 510 RRMFSGVGVYLVDAWEMTLAHYLPHKLHPDEVIVKNQLDMFLSFVC 555


>gi|217330576 neurexophilin 3 [Homo sapiens]
          Length = 252

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 5   ALTAGASGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSE 45
           AL    +GK++D  NGT+ V F     GQ ++S+ L+ PS+
Sbjct: 113 ALNLLVTGKIVDHGNGTFSVHFQHNATGQGNISISLVPPSK 153


>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
          Length = 744

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query: 10  ASGKVMDFNNGTYLVSFTLFWEGQVSLSLLL 40
           A G+++D  NGTY   +T+  EG  +LSL L
Sbjct: 377 ADGEILDNKNGTYEFLYTVQKEGDFTLSLRL 407


>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
          Length = 771

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query: 10  ASGKVMDFNNGTYLVSFTLFWEGQVSLSLLL 40
           A G+++D  NGTY   +T+  EG  +LSL L
Sbjct: 404 ADGEILDNKNGTYEFLYTVQKEGDFTLSLRL 434


>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 14  VMDFNNGTYLVSFTLFWEGQVSLSLLLI-HPSEGASALWRARNQG 57
           V+D  NGTY + +T   EG++ LS+LL   P  G+    RA   G
Sbjct: 378 VVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALRPG 422


>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 14  VMDFNNGTYLVSFTLFWEGQVSLSLLLI-HPSEGASALWRARNQG 57
           V+D  NGTY + +T   EG++ LS+LL   P  G+    RA   G
Sbjct: 378 VVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALRPG 422


>gi|170784865 CAS1 domain containing 1 [Homo sapiens]
          Length = 797

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 183 WITTFCNQVQLDTIKINGCLKGKLIYLLGDSTLRQWIYYFPKVV 226
           W    C   +    +   CL  K I  +GDS +RQ  Y F K++
Sbjct: 64  WQPHSCMMHKYKISEAKNCLVDKHIAFIGDSRIRQLFYSFVKII 107


>gi|23097338 neurexophilin 1 precursor [Homo sapiens]
          Length = 271

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 13/35 (37%), Positives = 23/35 (65%)

Query: 11  SGKVMDFNNGTYLVSFTLFWEGQVSLSLLLIHPSE 45
           +GK++D  NGT+ V F     GQ ++S+ L+ P++
Sbjct: 138 TGKIVDHGNGTFSVYFRHNSTGQGNVSVSLVPPTK 172


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.140    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,479,779
Number of Sequences: 37866
Number of extensions: 649358
Number of successful extensions: 1625
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1602
Number of HSP's gapped (non-prelim): 13
length of query: 405
length of database: 18,247,518
effective HSP length: 105
effective length of query: 300
effective length of database: 14,271,588
effective search space: 4281476400
effective search space used: 4281476400
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.