Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 169234653

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169234653 NKG2-D type II integral membrane protein [Homo
sapiens]
         (216 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169234653 NKG2-D type II integral membrane protein [Homo sapi...   467   e-132
gi|194018501 C-type lectin domain family 12, member B isoform 1 ...    93   2e-19
gi|167614498 killer cell lectin-like receptor subfamily D, membe...    89   3e-18
gi|7669499 killer cell lectin-like receptor subfamily D, member ...    89   3e-18
gi|4504889 killer cell lectin-like receptor subfamily D, member ...    89   3e-18
gi|194018499 C-type lectin domain family 12, member B isoform 2 ...    86   2e-17
gi|4505501 oxidized low density lipoprotein (lectin-like) recept...    84   9e-17
gi|223278342 C-type lectin domain family 4, member M isoform 11 ...    84   9e-17
gi|223278347 C-type lectin domain family 4, member M isoform 9 [...    84   1e-16
gi|223278339 C-type lectin domain family 4, member M isoform 7 [...    84   1e-16
gi|223278337 C-type lectin domain family 4, member M isoform 12 ...    84   1e-16
gi|223278335 C-type lectin domain family 4, member M isoform 2 [...    84   1e-16
gi|223278350 C-type lectin domain family 4, member M isoform 8 [...    84   1e-16
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H...    84   1e-16
gi|153252048 C-type lectin domain family 1, member B isoform b [...    81   6e-16
gi|153252029 C-type lectin domain family 1, member B isoform a [...    81   6e-16
gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]     80   2e-15
gi|223029517 CD209 molecule isoform 8 [Homo sapiens]                   77   9e-15
gi|223029386 CD209 molecule isoform 3 [Homo sapiens]                   77   9e-15
gi|223029384 CD209 molecule isoform 7 [Homo sapiens]                   77   9e-15
gi|223029382 CD209 molecule isoform 6 [Homo sapiens]                   77   9e-15
gi|223029380 CD209 molecule isoform 5 [Homo sapiens]                   77   9e-15
gi|10863957 CD209 molecule isoform 1 [Homo sapiens]                    77   9e-15
gi|223029388 CD209 molecule isoform 4 [Homo sapiens]                   72   5e-13
gi|37577103 C-type lectin-like receptor-1 [Homo sapiens]               71   6e-13
gi|47717094 killer cell lectin-like receptor subfamily C, member...    71   8e-13
gi|4504881 killer cell lectin-like receptor subfamily C, member ...    71   8e-13
gi|47717096 killer cell lectin-like receptor subfamily G, member...    71   8e-13
gi|13384604 dendritic cell-associated C-type lectin 1 isoform b ...    70   2e-12
gi|75709169 killer cell lectin-like receptor subfamily C, member...    69   4e-12

>gi|169234653 NKG2-D type II integral membrane protein [Homo
           sapiens]
          Length = 216

 Score =  467 bits (1202), Expect = e-132
 Identities = 216/216 (100%), Positives = 216/216 (100%)

Query: 1   MGWIRGRRSRHSWEMSEFHNYNLDLKKSDFSTRWQKQRCPVVKSKCRENASPFFFCCFIA 60
           MGWIRGRRSRHSWEMSEFHNYNLDLKKSDFSTRWQKQRCPVVKSKCRENASPFFFCCFIA
Sbjct: 1   MGWIRGRRSRHSWEMSEFHNYNLDLKKSDFSTRWQKQRCPVVKSKCRENASPFFFCCFIA 60

Query: 61  VAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCGPCPKNWICYKNNCYQFFDESKNW 120
           VAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCGPCPKNWICYKNNCYQFFDESKNW
Sbjct: 61  VAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCGPCPKNWICYKNNCYQFFDESKNW 120

Query: 121 YESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLT 180
           YESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLT
Sbjct: 121 YESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLT 180

Query: 181 IIEMQKGDCALYASSFKGYIENCSTPNTYICMQRTV 216
           IIEMQKGDCALYASSFKGYIENCSTPNTYICMQRTV
Sbjct: 181 IIEMQKGDCALYASSFKGYIENCSTPNTYICMQRTV 216


>gi|194018501 C-type lectin domain family 12, member B isoform 1
           [Homo sapiens]
          Length = 276

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 10/136 (7%)

Query: 85  QEVQIPLTESYCGPCPKNWICYKNNCYQFF-DESKNWYESQASCMSQNASLLKVYSKEDQ 143
           QE+ I  ++  C PCPK W  Y+N+CY F  +E K W  S+  C+ +N++L+K+ S E++
Sbjct: 129 QELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEK 188

Query: 144 DLLK----LVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQK----GDCALYASS 195
           D L     L+ S+ W+GL    +  SW WEDGS+ SP+L +  E+ +      CA Y   
Sbjct: 189 DFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLFSTKELDQINGSKGCA-YFQK 247

Query: 196 FKGYIENCSTPNTYIC 211
              YI  CS    +IC
Sbjct: 248 GNIYISRCSAEIFWIC 263


>gi|167614498 killer cell lectin-like receptor subfamily D, member 1
           isoform 1 [Homo sapiens]
          Length = 179

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSY 152
           +S C  C + W+ Y+ NCY    E K W ES+  C SQ +SLL++ + ++ D +   + +
Sbjct: 55  DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQF 114

Query: 153 HWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCALYASSFKGYIENCSTPNTYIC 211
           +W+GL +   + +W WE+GS LS  L    E     +C  Y  +     E+C   N YIC
Sbjct: 115 YWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIC 174

Query: 212 MQRTV 216
            Q+ +
Sbjct: 175 KQQLI 179


>gi|7669499 killer cell lectin-like receptor subfamily D, member 1
           isoform 2 [Homo sapiens]
          Length = 148

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSY 152
           +S C  C + W+ Y+ NCY    E K W ES+  C SQ +SLL++ + ++ D +   + +
Sbjct: 24  DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQF 83

Query: 153 HWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCALYASSFKGYIENCSTPNTYIC 211
           +W+GL +   + +W WE+GS LS  L    E     +C  Y  +     E+C   N YIC
Sbjct: 84  YWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIC 143

Query: 212 MQRTV 216
            Q+ +
Sbjct: 144 KQQLI 148


>gi|4504889 killer cell lectin-like receptor subfamily D, member 1
           isoform 1 [Homo sapiens]
          Length = 179

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSY 152
           +S C  C + W+ Y+ NCY    E K W ES+  C SQ +SLL++ + ++ D +   + +
Sbjct: 55  DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQF 114

Query: 153 HWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCALYASSFKGYIENCSTPNTYIC 211
           +W+GL +   + +W WE+GS LS  L    E     +C  Y  +     E+C   N YIC
Sbjct: 115 YWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIC 174

Query: 212 MQRTV 216
            Q+ +
Sbjct: 175 KQQLI 179


>gi|194018499 C-type lectin domain family 12, member B isoform 2
           [Homo sapiens]
          Length = 232

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 5/99 (5%)

Query: 85  QEVQIPLTESYCGPCPKNWICYKNNCYQF-FDESKNWYESQASCMSQNASLLKVYSKEDQ 143
           QE+ I  ++  C PCPK W  Y+N+CY F  +E K W  S+  C+ +N++L+K+ S E++
Sbjct: 129 QELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEK 188

Query: 144 DLLK----LVKSYHWMGLVHIPTNGSWQWEDGSILSPNL 178
           D L     L+ S+ W+GL    +  SW WEDGS+ SP+L
Sbjct: 189 DFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSL 227


>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
           1 [Homo sapiens]
          Length = 273

 Score = 84.0 bits (206), Expect = 9e-17
 Identities = 48/126 (38%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 98  PCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSY----H 153
           PCP++WI +  NCY F   S NW +SQ  C+S +A LLK+ S  D D ++   SY     
Sbjct: 143 PCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFPF 202

Query: 154 WMGLVHIPTNGSWQWEDGSILSPNLLTI-----IEMQKGDCALYASSFKGYIENCSTPNT 208
           WMGL     +  W WEDGS L P+L  +          G CA Y      Y ENC     
Sbjct: 203 WMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCA-YIQRGAVYAENCILAAF 261

Query: 209 YICMQR 214
            IC ++
Sbjct: 262 SICQKK 267


>gi|223278342 C-type lectin domain family 4, member M isoform 11
           [Homo sapiens]
          Length = 332

 Score = 84.0 bits (206), Expect = 9e-17
 Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 14/145 (9%)

Query: 79  LNSLFNQEVQIPLT-ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKV 137
           L  ++ +  Q+    E  C  CPK+W  ++ NCY   +  +NW++S  +C    A L+ +
Sbjct: 180 LQEIYQELTQLKAAVERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVI 239

Query: 138 YSKEDQDLLKLVKS----YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQK------G 187
            + E+Q+ L+L  S    + WMGL  +   G+WQW DGS LSP+        +       
Sbjct: 240 KTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNE 299

Query: 188 DCALYASSFKGYIEN-CSTPNTYIC 211
           DCA ++ S  G+ +N C   N +IC
Sbjct: 300 DCAEFSGS--GWNDNRCDVDNYWIC 322


>gi|223278347 C-type lectin domain family 4, member M isoform 9
           [Homo sapiens]
          Length = 353

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 13/130 (10%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C  CPK+W  ++ NCY   +  +NW++S  +C    A L+ + + E+Q+ L+L  S 
Sbjct: 216 ERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR 275

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQK------GDCALYASSFKGYIEN 202
              + WMGL  +   G+WQW DGS LSP+        +       DCA ++ S  G+ +N
Sbjct: 276 SNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS--GWNDN 333

Query: 203 -CSTPNTYIC 211
            C   N +IC
Sbjct: 334 RCDVDNYWIC 343


>gi|223278339 C-type lectin domain family 4, member M isoform 7
           [Homo sapiens]
          Length = 263

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 13/130 (10%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C  CPK+W  ++ NCY   +  +NW++S  +C    A L+ + + E+Q+ L+L  S 
Sbjct: 126 ERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR 185

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQK------GDCALYASSFKGYIEN 202
              + WMGL  +   G+WQW DGS LSP+        +       DCA ++ S  G+ +N
Sbjct: 186 SNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS--GWNDN 243

Query: 203 -CSTPNTYIC 211
            C   N +IC
Sbjct: 244 RCDVDNYWIC 253


>gi|223278337 C-type lectin domain family 4, member M isoform 12
           [Homo sapiens]
          Length = 375

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 13/130 (10%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C  CPK+W  ++ NCY   +  +NW++S  +C    A L+ + + E+Q+ L+L  S 
Sbjct: 238 ERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR 297

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQK------GDCALYASSFKGYIEN 202
              + WMGL  +   G+WQW DGS LSP+        +       DCA ++ S  G+ +N
Sbjct: 298 SNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS--GWNDN 355

Query: 203 -CSTPNTYIC 211
            C   N +IC
Sbjct: 356 RCDVDNYWIC 365


>gi|223278335 C-type lectin domain family 4, member M isoform 2
           [Homo sapiens]
          Length = 348

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 13/130 (10%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C  CPK+W  ++ NCY   +  +NW++S  +C    A L+ + + E+Q+ L+L  S 
Sbjct: 211 ERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR 270

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQK------GDCALYASSFKGYIEN 202
              + WMGL  +   G+WQW DGS LSP+        +       DCA ++ S  G+ +N
Sbjct: 271 SNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS--GWNDN 328

Query: 203 -CSTPNTYIC 211
            C   N +IC
Sbjct: 329 RCDVDNYWIC 338


>gi|223278350 C-type lectin domain family 4, member M isoform 8
           [Homo sapiens]
          Length = 376

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 13/130 (10%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C  CPK+W  ++ NCY   +  +NW++S  +C    A L+ + + E+Q+ L+L  S 
Sbjct: 239 ERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR 298

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQK------GDCALYASSFKGYIEN 202
              + WMGL  +   G+WQW DGS LSP+        +       DCA ++ S  G+ +N
Sbjct: 299 SNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS--GWNDN 356

Query: 203 -CSTPNTYIC 211
            C   N +IC
Sbjct: 357 RCDVDNYWIC 366


>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
           sapiens]
          Length = 399

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 13/130 (10%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C  CPK+W  ++ NCY   +  +NW++S  +C    A L+ + + E+Q+ L+L  S 
Sbjct: 262 ERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR 321

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQK------GDCALYASSFKGYIEN 202
              + WMGL  +   G+WQW DGS LSP+        +       DCA ++ S  G+ +N
Sbjct: 322 SNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS--GWNDN 379

Query: 203 -CSTPNTYIC 211
            C   N +IC
Sbjct: 380 RCDVDNYWIC 389


>gi|153252048 C-type lectin domain family 1, member B isoform b
           [Homo sapiens]
          Length = 196

 Score = 81.3 bits (199), Expect = 6e-16
 Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 10/125 (8%)

Query: 96  CGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS---- 151
           C PC  NW  Y ++CY FF  +  W ES+  C   NA+LLK+   +++++++ +K+    
Sbjct: 66  CSPCDTNWRYYGDSCYGFFRHNLTWEESKQYCTDMNATLLKI---DNRNIVEYIKARTHL 122

Query: 152 YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQKG--DCALYASSFKGYIENCSTPNTY 209
             W+GL    +N  W+WEDGS++S N+   +E  KG  +CA Y  + K +   C   +  
Sbjct: 123 IRWVGLSRQKSNEVWKWEDGSVISENMFEFLEDGKGNMNCA-YFHNGKMHPTFCENKHYL 181

Query: 210 ICMQR 214
           +C ++
Sbjct: 182 MCERK 186


>gi|153252029 C-type lectin domain family 1, member B isoform a
           [Homo sapiens]
          Length = 229

 Score = 81.3 bits (199), Expect = 6e-16
 Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 10/125 (8%)

Query: 96  CGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS---- 151
           C PC  NW  Y ++CY FF  +  W ES+  C   NA+LLK+   +++++++ +K+    
Sbjct: 99  CSPCDTNWRYYGDSCYGFFRHNLTWEESKQYCTDMNATLLKI---DNRNIVEYIKARTHL 155

Query: 152 YHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQKG--DCALYASSFKGYIENCSTPNTY 209
             W+GL    +N  W+WEDGS++S N+   +E  KG  +CA Y  + K +   C   +  
Sbjct: 156 IRWVGLSRQKSNEVWKWEDGSVISENMFEFLEDGKGNMNCA-YFHNGKMHPTFCENKHYL 214

Query: 210 ICMQR 214
           +C ++
Sbjct: 215 MCERK 219


>gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]
          Length = 241

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 9/122 (7%)

Query: 98  PCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQD-----LLKLVKSY 152
           PCP NWI  + +CY   +    W+ SQ +C+ + ++LL++ SKE+ D     L K+  SY
Sbjct: 112 PCPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSY 171

Query: 153 -HWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQKGD--CALYASSFKGYIENCSTPNTY 209
            +W+GL     +G W W+DGS  SP LL     Q  +  C  Y  S      NCST   +
Sbjct: 172 DYWVGLSQDGHSGRWLWQDGSSPSPGLLPAERSQSANQVCG-YVKSNSLLSSNCSTWKYF 230

Query: 210 IC 211
           IC
Sbjct: 231 IC 232


>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
          Length = 243

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C PCP  W  ++ NCY   +  +NW++S  +C    A L+ + S E+Q+ L+L  S 
Sbjct: 89  ERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR 148

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPN 177
              + WMGL  +   G+WQW DGS L P+
Sbjct: 149 SNRFTWMGLSDLNQEGTWQWVDGSPLLPS 177


>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
          Length = 380

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C PCP  W  ++ NCY   +  +NW++S  +C    A L+ + S E+Q+ L+L  S 
Sbjct: 226 ERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR 285

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPN 177
              + WMGL  +   G+WQW DGS L P+
Sbjct: 286 SNRFTWMGLSDLNQEGTWQWVDGSPLLPS 314


>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
          Length = 312

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C PCP  W  ++ NCY   +  +NW++S  +C    A L+ + S E+Q+ L+L  S 
Sbjct: 158 ERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR 217

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPN 177
              + WMGL  +   G+WQW DGS L P+
Sbjct: 218 SNRFTWMGLSDLNQEGTWQWVDGSPLLPS 246


>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
          Length = 360

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C PCP  W  ++ NCY   +  +NW++S  +C    A L+ + S E+Q+ L+L  S 
Sbjct: 206 ERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR 265

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPN 177
              + WMGL  +   G+WQW DGS L P+
Sbjct: 266 SNRFTWMGLSDLNQEGTWQWVDGSPLLPS 294


>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
          Length = 268

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C PCP  W  ++ NCY   +  +NW++S  +C    A L+ + S E+Q+ L+L  S 
Sbjct: 114 ERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR 173

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPN 177
              + WMGL  +   G+WQW DGS L P+
Sbjct: 174 SNRFTWMGLSDLNQEGTWQWVDGSPLLPS 202


>gi|10863957 CD209 molecule isoform 1 [Homo sapiens]
          Length = 404

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKS- 151
           E  C PCP  W  ++ NCY   +  +NW++S  +C    A L+ + S E+Q+ L+L  S 
Sbjct: 250 ERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR 309

Query: 152 ---YHWMGLVHIPTNGSWQWEDGSILSPN 177
              + WMGL  +   G+WQW DGS L P+
Sbjct: 310 SNRFTWMGLSDLNQEGTWQWVDGSPLLPS 338


>gi|223029388 CD209 molecule isoform 4 [Homo sapiens]
          Length = 398

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 93  ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSY 152
           E  C PCP  W  ++ NCY   +  +NW++S  +C    A L+ + S E+Q        +
Sbjct: 250 ERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQS--SRSNRF 307

Query: 153 HWMGLVHIPTNGSWQWEDGSILSPN 177
            WMGL  +   G+WQW DGS L P+
Sbjct: 308 TWMGLSDLNQEGTWQWVDGSPLLPS 332


>gi|37577103 C-type lectin-like receptor-1 [Homo sapiens]
          Length = 280

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 12/129 (9%)

Query: 96  CGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKED------QDLLKLV 149
           C PC + W  + +NCYQF+ +SK+W + +  C+S+N+++LK+  +ED      Q   +  
Sbjct: 134 CSPCTEQWKWHGDNCYQFYKDSKSWEDCKYFCLSENSTMLKINKQEDLEFAASQSYSEFF 193

Query: 150 KSYHWMGLVHIPTNGSWQWEDGSILSPNLLTII----EMQKGDCALYASSFKGYIENCST 205
            SY W GL+   +  +W W DG+  +  L  II      +  DC    +    + ++C  
Sbjct: 194 YSY-WTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVTSPRSRDCVAILNGMI-FSKDCKE 251

Query: 206 PNTYICMQR 214
               +C +R
Sbjct: 252 LKRCVCERR 260


>gi|47717094 killer cell lectin-like receptor subfamily C, member 1
           isoform NKG2-A [Homo sapiens]
          Length = 233

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 3/115 (2%)

Query: 57  CFIAVAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCGPCPKNWICYKNNCYQFFDE 116
           C I +A  +  +++ +       NS  N   Q      +CG CP+ WI Y N+CY    E
Sbjct: 80  CLILMASVVTIVVIPSTLIQRHNNSSLNTRTQ---KARHCGHCPEEWITYSNSCYYIGKE 136

Query: 117 SKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDG 171
            + W ES  +C S+N+SLL + ++E+   L ++    W+G+    ++  W   +G
Sbjct: 137 RRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNG 191


>gi|4504881 killer cell lectin-like receptor subfamily C, member 1
           isoform NKG2-A [Homo sapiens]
          Length = 233

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 3/115 (2%)

Query: 57  CFIAVAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCGPCPKNWICYKNNCYQFFDE 116
           C I +A  +  +++ +       NS  N   Q      +CG CP+ WI Y N+CY    E
Sbjct: 80  CLILMASVVTIVVIPSTLIQRHNNSSLNTRTQ---KARHCGHCPEEWITYSNSCYYIGKE 136

Query: 117 SKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDG 171
            + W ES  +C S+N+SLL + ++E+   L ++    W+G+    ++  W   +G
Sbjct: 137 RRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNG 191


>gi|47717096 killer cell lectin-like receptor subfamily G, member 1
           [Homo sapiens]
          Length = 189

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)

Query: 57  CFIAVAMGIRFIIMVTIWSAVFLNSLFNQEVQIP----LTESYCGPCPKNWICYKNNCYQ 112
           C +A+A+G+         +AV L+ L  Q +        T + C  CP  W+ Y N+CY 
Sbjct: 37  CLVAIALGLL--------TAVLLSVLLYQWILCQGSNYSTCASCPSCPDRWMKYGNHCYY 88

Query: 113 FFDESKNWYESQASCMSQNASLLKVYSKEDQDLLK--LVKSYHWMGLVHIPTNGSWQWED 170
           F  E K+W  S   C+++++ LL +   ++  LL+  L +++ W+GL     N  W+WED
Sbjct: 89  FSVEEKDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLSEAFCWIGL---RNNSGWRWED 145

Query: 171 GSILSPNLLTIIEMQKGDCALYASSFKGYIENCSTPNTYIC 211
           GS L+ + ++     +   A+  +  +    +C  P  ++C
Sbjct: 146 GSPLNFSRISSNSFVQTCGAINKNGLQA--SSCEVPLHWVC 184


>gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
           [Homo sapiens]
          Length = 201

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 27/188 (14%)

Query: 38  RCPVVKSKCRENASPFFFCCFIAVAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCG 97
           R  VV  K    ASP +    IAV +GI  ++++ I  AV L ++               
Sbjct: 27  RIAVVSEKGSCAASPPWR--LIAVILGILCLVILVI--AVVLGTM----------GVLSS 72

Query: 98  PCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQD-LLKLVKSY---- 152
           PCP NWI Y+ +CY F     +W  S+  C    ++LLK+ S  +   ++K V S     
Sbjct: 73  PCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNS 132

Query: 153 HWMGLVHIPTNGSWQWEDGSILSPNLLTI-----IEMQKGDCA-LYASSFKGYIENCSTP 206
            W+GL    T   W WEDGS  S NL  I      E    +C  ++ S    Y + CS P
Sbjct: 133 FWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVI--YDQLCSVP 190

Query: 207 NTYICMQR 214
           +  IC ++
Sbjct: 191 SYSICEKK 198


>gi|75709169 killer cell lectin-like receptor subfamily C, member 2
           [Homo sapiens]
          Length = 231

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 65  IRFIIMVTIWSAVFLNSLFNQEVQIPLTES----YCGPCPKNWICYKNNCYQFFDESKNW 120
           I  ++M T+   + L     Q    P T +    +CG CP+ WI Y N+CY    E + W
Sbjct: 79  ICIVLMATVLKTIVLIPFLEQNNFSPNTRTQKARHCGHCPEEWITYSNSCYYIGKERRTW 138

Query: 121 YESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSW 166
            ES  +C S+N+SLL + ++E+   L  +    W+G+    ++  W
Sbjct: 139 EESLLACTSKNSSLLSIDNEEEMKFLASILPSSWIGVFRNSSHHPW 184


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.134    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,898,898
Number of Sequences: 37866
Number of extensions: 372455
Number of successful extensions: 1256
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1011
Number of HSP's gapped (non-prelim): 162
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press