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Search of human proteins with 169194724
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169194724 PREDICTED: similar to FXYD domain-containing ion
transport regulator 6 [Homo sapiens]
(95 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169194724 PREDICTED: similar to FXYD domain-containing ion tr... 191 1e-49
gi|169194767 PREDICTED: similar to FXYD domain-containing ion tr... 191 1e-49
gi|169190389 PREDICTED: similar to FXYD domain-containing ion tr... 191 1e-49
gi|11612655 FXYD domain-containing ion transport regulator 6 [Ho... 154 1e-38
gi|11612672 phospholemman precursor [Homo sapiens] 71 2e-13
gi|11612670 phospholemman precursor [Homo sapiens] 71 2e-13
gi|209862817 FXYD domain containing ion transport regulator 3 is... 63 4e-11
gi|209862809 FXYD domain containing ion transport regulator 3 is... 63 4e-11
gi|5174635 FXYD domain containing ion transport regulator 3 isof... 63 4e-11
gi|11125766 FXYD domain-containing ion transport regulator 2 iso... 52 1e-07
gi|11125764 FXYD domain-containing ion transport regulator 2 iso... 52 1e-07
gi|209862819 FXYD domain containing ion transport regulator 3 is... 51 2e-07
gi|11612674 FXYD domain containing ion transport regulator 3 iso... 51 2e-07
gi|27764904 FXYD domain containing ion transport regulator 4 [Ho... 51 2e-07
gi|209862811 FXYD domain containing ion transport regulator 3 is... 50 4e-07
gi|11612659 FXYD domain-containing ion transport regulator 7 [Ho... 44 4e-05
gi|47778938 FXYD domain-containing ion transport regulator 5 [Ho... 41 2e-04
gi|21618361 FXYD domain-containing ion transport regulator 5 [Ho... 41 2e-04
gi|14917119 keratin 34 [Homo sapiens] 28 1.2
gi|188595665 FXYD domain-containing ion transport regulator 2 is... 28 2.1
gi|46358066 hypothetical protein LOC388325 [Homo sapiens] 26 6.0
gi|14270496 protocadherin gamma subfamily B, 3 isoform 2 precurs... 26 6.0
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs... 26 6.0
>gi|169194724 PREDICTED: similar to FXYD domain-containing ion
transport regulator 6 [Homo sapiens]
Length = 95
Score = 191 bits (484), Expect = 1e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR
Sbjct: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
Query: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95
CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES
Sbjct: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95
>gi|169194767 PREDICTED: similar to FXYD domain-containing ion
transport regulator 6 [Homo sapiens]
Length = 95
Score = 191 bits (484), Expect = 1e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR
Sbjct: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
Query: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95
CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES
Sbjct: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95
>gi|169190389 PREDICTED: similar to FXYD domain-containing ion
transport regulator 6 [Homo sapiens]
Length = 95
Score = 191 bits (484), Expect = 1e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR
Sbjct: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
Query: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95
CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES
Sbjct: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95
>gi|11612655 FXYD domain-containing ion transport regulator 6
[Homo sapiens]
Length = 95
Score = 154 bits (389), Expect = 1e-38
Identities = 76/95 (80%), Positives = 86/95 (90%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
ME+VL+FLCSLLA +VLA A E+EK++DPFHYDYQTLRI GLV AVVLFS+GILLIL R
Sbjct: 1 MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRR 60
Query: 61 CKCSFNQKPRTPGEEEAQVENLITANATKLQKAES 95
CKCSFNQKPR PG+EEAQVENLITANAT+ QKAE+
Sbjct: 61 CKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN 95
>gi|11612672 phospholemman precursor [Homo sapiens]
Length = 92
Score = 71.2 bits (173), Expect = 2e-13
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 4 VLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKC 63
+L+F LL +A A E K+ DPF YDYQ+L+I GLV A +LF +GIL++L RC+C
Sbjct: 7 ILVFCVGLLT---MAKA-ESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 62
Query: 64 SFNQKPRT--PGEEEAQVENLITANATK 89
FNQ+ RT P EEE + I +T+
Sbjct: 63 KFNQQQRTGEPDEEEGTFRSSIRRLSTR 90
>gi|11612670 phospholemman precursor [Homo sapiens]
Length = 92
Score = 71.2 bits (173), Expect = 2e-13
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 4 VLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKC 63
+L+F LL +A A E K+ DPF YDYQ+L+I GLV A +LF +GIL++L RC+C
Sbjct: 7 ILVFCVGLLT---MAKA-ESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 62
Query: 64 SFNQKPRT--PGEEEAQVENLITANATK 89
FNQ+ RT P EEE + I +T+
Sbjct: 63 KFNQQQRTGEPDEEEGTFRSSIRRLSTR 90
>gi|209862817 FXYD domain containing ion transport regulator 3
isoform 1 precursor [Homo sapiens]
Length = 87
Score = 63.2 bits (152), Expect = 4e-11
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++ +
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK 60
Query: 61 CKCSFNQKP-RTPGE 74
CKC F QK PGE
Sbjct: 61 CKCKFGQKSGHHPGE 75
>gi|209862809 FXYD domain containing ion transport regulator 3
isoform 3 [Homo sapiens]
Length = 144
Score = 63.2 bits (152), Expect = 4e-11
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++ +
Sbjct: 58 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK 117
Query: 61 CKCSFNQKP-RTPGE 74
CKC F QK PGE
Sbjct: 118 CKCKFGQKSGHHPGE 132
>gi|5174635 FXYD domain containing ion transport regulator 3
isoform 1 precursor [Homo sapiens]
Length = 87
Score = 63.2 bits (152), Expect = 4e-11
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCR 60
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++ +
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK 60
Query: 61 CKCSFNQKP-RTPGE 74
CKC F QK PGE
Sbjct: 61 CKCKFGQKSGHHPGE 75
>gi|11125766 FXYD domain-containing ion transport regulator 2
isoform 1 [Homo sapiens]
Length = 66
Score = 51.6 bits (122), Expect = 1e-07
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 27 IDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKCSFNQKPRTPGEEE 76
+DPF+YDY+T+R GL+ A + F +G+L++L R +C N+K R E+E
Sbjct: 16 VDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQINEDE 65
>gi|11125764 FXYD domain-containing ion transport regulator 2
isoform 2 [Homo sapiens]
Length = 64
Score = 51.6 bits (122), Expect = 1e-07
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 27 IDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKCSFNQKPRTPGEEE 76
+DPF+YDY+T+R GL+ A + F +G+L++L R +C N+K R E+E
Sbjct: 14 VDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQINEDE 63
>gi|209862819 FXYD domain containing ion transport regulator 3
isoform 2 precursor [Homo sapiens]
Length = 113
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLIL--- 57
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
Query: 58 -----------------------GCRCKCSFNQKP-RTPGE 74
G +CKC F QK PGE
Sbjct: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGE 101
>gi|11612674 FXYD domain containing ion transport regulator 3
isoform 2 precursor [Homo sapiens]
Length = 113
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLIL--- 57
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
Query: 58 -----------------------GCRCKCSFNQKP-RTPGE 74
G +CKC F QK PGE
Sbjct: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGE 101
>gi|27764904 FXYD domain containing ion transport regulator 4
[Homo sapiens]
Length = 89
Score = 51.2 bits (121), Expect = 2e-07
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 28 DPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKCSFNQKPRTPGEEEA 77
DPF+YD++ L++ GL+C +L GI +L +CKC +QK +P E+A
Sbjct: 28 DPFYYDWKNLQLSGLICGGLLAIAGIAAVLSGKCKCKSSQKQHSPVPEKA 77
>gi|209862811 FXYD domain containing ion transport regulator 3
isoform4 precursor [Homo sapiens]
Length = 96
Score = 50.1 bits (118), Expect = 4e-07
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 26/94 (27%)
Query: 1 MEVVLIFLCSLLAHIVLADAVEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLIL--- 57
M+ V + L LA + DA + E + PF+YD+ +L++ GL+CA VL ++GI++++
Sbjct: 1 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW 60
Query: 58 -----------------------GCRCKCSFNQK 68
G +CKC F QK
Sbjct: 61 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQK 94
>gi|11612659 FXYD domain-containing ion transport regulator 7
[Homo sapiens]
Length = 80
Score = 43.5 bits (101), Expect = 4e-05
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 28 DPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKC 63
DPF+YDY T++ G+ A +LF +GIL+++ + KC
Sbjct: 16 DPFYYDYNTVQTVGMTLATILFLLGILIVISKKVKC 51
>gi|47778938 FXYD domain-containing ion transport regulator 5 [Homo
sapiens]
Length = 178
Score = 41.2 bits (95), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 DPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCK 62
DPF YD TLR RGL+ A VLF GI+++ +C+
Sbjct: 133 DPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCR 167
>gi|21618361 FXYD domain-containing ion transport regulator 5 [Homo
sapiens]
Length = 178
Score = 41.2 bits (95), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 DPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCK 62
DPF YD TLR RGL+ A VLF GI+++ +C+
Sbjct: 133 DPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCR 167
>gi|14917119 keratin 34 [Homo sapiens]
Length = 436
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 21 VEREKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRCKCS 64
++R++++ P H Q L + C+ + L LGCR CS
Sbjct: 16 LQRKERLKPAHIHLQQLTCFSITCSSTMSYSCCLPSLGCRTSCS 59
>gi|188595665 FXYD domain-containing ion transport regulator 2
isoform 3 [Homo sapiens]
Length = 145
Score = 27.7 bits (60), Expect = 2.1
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 33 DYQTLRIRGLVCAVVLFSIGILLIL 57
DY+T+R GL+ A + F +G+L++L
Sbjct: 88 DYETVRNGGLIFAGLAFIVGLLILL 112
>gi|46358066 hypothetical protein LOC388325 [Homo sapiens]
Length = 145
Score = 26.2 bits (56), Expect = 6.0
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 42 LVCAVVLFSIGILLILGCRCKCSFNQ-------KP--RTPGEEEAQVENLITANATKL 90
L A+++ S+G+ LIL C CK + KP +EE EN++ + +L
Sbjct: 23 LAVAIIVVSVGLGLILYCVCKWQLRRGKKWEIAKPLKHKQVDEEKMYENVLNESPVQL 80
>gi|14270496 protocadherin gamma subfamily B, 3 isoform 2 precursor
[Homo sapiens]
Length = 814
Score = 26.2 bits (56), Expect = 6.0
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 10 SLLAHIVLADAVE--------REKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRC 61
+++ H++ AD+++ R DP + Q + L VLF + ++L + R
Sbjct: 657 TVMLHLIFADSLQEIQPDLSDRPTPSDP-QAELQFHLVVALALISVLFLLAVILAISLRL 715
Query: 62 KCSFNQKPRTPG 73
+CS +P T G
Sbjct: 716 RCS--SRPATEG 725
>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 26.2 bits (56), Expect = 6.0
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 10 SLLAHIVLADAVE--------REKQIDPFHYDYQTLRIRGLVCAVVLFSIGILLILGCRC 61
+++ H++ AD+++ R DP + Q + L VLF + ++L + R
Sbjct: 657 TVMLHLIFADSLQEIQPDLSDRPTPSDP-QAELQFHLVVALALISVLFLLAVILAISLRL 715
Query: 62 KCSFNQKPRTPG 73
+CS +P T G
Sbjct: 716 RCS--SRPATEG 725
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.140 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,437,058
Number of Sequences: 37866
Number of extensions: 117462
Number of successful extensions: 379
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 354
Number of HSP's gapped (non-prelim): 23
length of query: 95
length of database: 18,247,518
effective HSP length: 66
effective length of query: 29
effective length of database: 15,748,362
effective search space: 456702498
effective search space used: 456702498
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.