Search of human proteins with 169179724

Search of human proteins with 169179724

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169179724 PREDICTED: Transmembrane protein ENSP00000340100
[Homo sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169183778 PREDICTED: Transmembrane protein ENSP00000340100 [H...   433   e-122
gi|169179724 PREDICTED: Transmembrane protein ENSP00000340100 [H...   433   e-122
gi|169180128 PREDICTED: Transmembrane protein ENSP00000340100 [H...   433   e-122
gi|213512168 hypothetical protein LOC259308 [Homo sapiens]            180   9e-46
gi|223633944 hypothetical protein LOC389762 [Homo sapiens]             41   6e-04
gi|223671858 hypothetical protein LOC389761 [Homo sapiens]             41   6e-04
gi|48717285 hypothetical protein LOC389763 [Homo sapiens]              38   0.005
gi|70980547 FYVE-finger-containing Rab5 effector protein rabenos...    37   0.012
gi|102467235 inner centromere protein antigens 135/155kDa isofor...    29   2.5  
gi|102467242 inner centromere protein antigens 135/155kDa isofor...    29   2.5  
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap...    28   4.2  
gi|4557841 recombination activating gene 1 [Homo sapiens]              28   5.5  
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom...    27   9.4  

>gi|169183778 PREDICTED: Transmembrane protein ENSP00000340100 [Homo
           sapiens]
          Length = 208

 Score =  433 bits (1113), Expect = e-122
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR 60
           MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR
Sbjct: 1   MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR 60

Query: 61  TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA 120
           TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA
Sbjct: 61  TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA 120

Query: 121 PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT 180
           PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT
Sbjct: 121 PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT 180

Query: 181 TQKTTEDPEAQPPSTEEEGLIFCDAPSA 208
           TQKTTEDPEAQPPSTEEEGLIFCDAPSA
Sbjct: 181 TQKTTEDPEAQPPSTEEEGLIFCDAPSA 208


>gi|169179724 PREDICTED: Transmembrane protein ENSP00000340100 [Homo
           sapiens]
          Length = 208

 Score =  433 bits (1113), Expect = e-122
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR 60
           MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR
Sbjct: 1   MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR 60

Query: 61  TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA 120
           TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA
Sbjct: 61  TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA 120

Query: 121 PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT 180
           PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT
Sbjct: 121 PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT 180

Query: 181 TQKTTEDPEAQPPSTEEEGLIFCDAPSA 208
           TQKTTEDPEAQPPSTEEEGLIFCDAPSA
Sbjct: 181 TQKTTEDPEAQPPSTEEEGLIFCDAPSA 208


>gi|169180128 PREDICTED: Transmembrane protein ENSP00000340100 [Homo
           sapiens]
          Length = 208

 Score =  433 bits (1113), Expect = e-122
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR 60
           MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR
Sbjct: 1   MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR 60

Query: 61  TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA 120
           TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA
Sbjct: 61  TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA 120

Query: 121 PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT 180
           PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT
Sbjct: 121 PEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGAT 180

Query: 181 TQKTTEDPEAQPPSTEEEGLIFCDAPSA 208
           TQKTTEDPEAQPPSTEEEGLIFCDAPSA
Sbjct: 181 TQKTTEDPEAQPPSTEEEGLIFCDAPSA 208


>gi|213512168 hypothetical protein LOC259308 [Homo sapiens]
          Length = 1335

 Score =  180 bits (456), Expect = 9e-46
 Identities = 89/133 (66%), Positives = 107/133 (80%), Gaps = 4/133 (3%)

Query: 1   MLSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDR 60
           MLSPTFVLW+VGYPLY YGSI I+ +IIWQVK+S  +LS  P RSCCRCH++V+Q++ D 
Sbjct: 1   MLSPTFVLWEVGYPLYIYGSIFIVIVIIWQVKRSHHELSSEPKRSCCRCHQKVRQRARDA 60

Query: 61  TSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADPCCQICNVMALEIKQLLAA 120
            S ARR S+EEAEK  KLL ++KSQGWLP E SVRRILCADPCCQICN +ALEI+QLL  
Sbjct: 61  ASTARRRSREEAEKPQKLLSIIKSQGWLPLERSVRRILCADPCCQICNSVALEIQQLL-- 118

Query: 121 PEVGLDNKMKLFL 133
             VG +N++ L L
Sbjct: 119 --VGENNQISLTL 129



 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 109  VMALEIKQLLAAPEVGLDNKMKLFLHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKS 168
            VM +  ++  +  E    NK+K FL  INP+ K + HE+S + S A  V + R +N+ KS
Sbjct: 1195 VMPVHAQKKPSLTESSFRNKIKCFLQHINPKTKGKGHEDS-MFSAAAKVAKTRKENVAKS 1253

Query: 169  PTVTKDHVWGATTQKTTEDPEAQP-PSTEEEGLIFCDAPSA 208
                K  V  + T+K T   +AQ  P+ +  G  F D P +
Sbjct: 1254 LAPAKSPVGRSKTEKPTGCSKAQSRPAQKLVGPAFLDGPQS 1294


>gi|223633944 hypothetical protein LOC389762 [Homo sapiens]
          Length = 917

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 9/127 (7%)

Query: 2   LSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDRT 61
           LSP     D+         + +  L ++ +  +        N    +   R ++K    T
Sbjct: 16  LSPDSHCLDIDLNFICLSGLGLFILYLFYMVLTLYSSPTEKNNDTQKHQGRARRKRKSVT 75

Query: 62  SRARRTSQEEAEKLWKLLFLMKSQGW------LPQEGSV---RRILCADPCCQICNVMAL 112
            + R++ Q+EAE+  KL   +KS G       L Q       RR+LC DP C++CN    
Sbjct: 76  FKDRKSLQKEAEEERKLHSFLKSFGPPVSCSPLGQHHDTTLFRRLLCPDPVCRVCNRATA 135

Query: 113 EIKQLLA 119
           +I++LL+
Sbjct: 136 DIQRLLS 142


>gi|223671858 hypothetical protein LOC389761 [Homo sapiens]
          Length = 917

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 9/127 (7%)

Query: 2   LSPTFVLWDVGYPLYTYGSICIIALIIWQVKKSCQKLSLVPNRSCCRCHRRVQQKSGDRT 61
           LSP     D+         + +  L ++ +  +        N    +   R ++K    T
Sbjct: 16  LSPDSHCLDIDLNFICLSGLGLFILYLFYMVLTLYSSPTEKNNDTQKHQGRARRKRKSVT 75

Query: 62  SRARRTSQEEAEKLWKLLFLMKSQGW------LPQEGSV---RRILCADPCCQICNVMAL 112
            + R++ Q+EAE+  KL   +KS G       L Q       RR+LC DP C++CN    
Sbjct: 76  FKDRKSLQKEAEEERKLHSFLKSFGPPVSCSPLGQHHDTTLFRRLLCPDPVCRVCNRATA 135

Query: 113 EIKQLLA 119
           +I++LL+
Sbjct: 136 DIQRLLS 142


>gi|48717285 hypothetical protein LOC389763 [Homo sapiens]
          Length = 1576

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 9/63 (14%)

Query: 66  RTSQEEAEKLWKLLFLMKS---------QGWLPQEGSVRRILCADPCCQICNVMALEIKQ 116
           ++ Q E E+  KLL L+KS         +G        RR+LC DP C++C     +I+Q
Sbjct: 83  KSFQREEEEERKLLSLLKSFGPPVSCSPRGQHHDTNHFRRLLCPDPVCRVCKRATADIQQ 142

Query: 117 LLA 119
           LL+
Sbjct: 143 LLS 145


>gi|70980547 FYVE-finger-containing Rab5 effector protein
           rabenosyn-5 [Homo sapiens]
          Length = 784

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 2/129 (1%)

Query: 32  KKSCQKLSLVPNRSCCRCHRRVQQKSGDRTSRARRTSQEEAEKLWKLLFLMKSQGWLPQE 91
           K+  ++   V  ++     RR++++     SRA   + E A        L K++GWLP  
Sbjct: 390 KEEMERKRAVERQAALESQRRLEERQSGLASRA--ANGEVASLRRGPAPLRKAEGWLPLS 447

Query: 92  GSVRRILCADPCCQICNVMALEIKQLLAAPEVGLDNKMKLFLHWINPEMKDRRHEESILL 151
           G   +   +DP  Q  + +   I+Q  AA  +     ++  L  +  E   ++ E++I L
Sbjct: 448 GGQGQSEDSDPLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQQTEKAIEL 507

Query: 152 SKAETVTQD 160
           S+ +   +D
Sbjct: 508 SRRQAEEED 516


>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
           [Homo sapiens]
          Length = 918

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 133 LHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGATTQKTTEDPEAQP 192
           L W+  E ++RRH+E  LL K +   Q+R +   ++  + +        Q+  E    + 
Sbjct: 648 LRWLQQEEEERRHQE--LLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQ 705

Query: 193 PSTEEE 198
              E+E
Sbjct: 706 ERREQE 711


>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
           [Homo sapiens]
          Length = 914

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 133 LHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGATTQKTTEDPEAQP 192
           L W+  E ++RRH+E  LL K +   Q+R +   ++  + +        Q+  E    + 
Sbjct: 644 LRWLQQEEEERRHQE--LLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQ 701

Query: 193 PSTEEE 198
              E+E
Sbjct: 702 ERREQE 707


>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
           sapiens]
          Length = 2365

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 52  RVQQKSGDRTSRARRTSQEEAEKLWKLLFLMKSQGWLPQEGSVRRILCADP 102
           R  Q  G RTS   R+ Q E    W  + L  +QG  PQ  S  R    DP
Sbjct: 912 RPTQSDGPRTSSPSRSKQSEVP--WASIALRPTQGDRPQTSSPSRPAQHDP 960


>gi|4557841 recombination activating gene 1 [Homo sapiens]
          Length = 1043

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 102 PCCQICNVMALEIKQLLAAPEVGLDNKMKLFLHWINPEMKDRRHEESILLSK 153
           P C ICN     +K+    P + L  K+K  L       + +R  ++ + SK
Sbjct: 209 PSCDICNTARRGLKRKSLQPNLQLSKKLKTVLDQARQARQRKRRAQARISSK 260


>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
           sapiens]
          Length = 1551

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/47 (27%), Positives = 20/47 (42%)

Query: 133 LHWINPEMKDRRHEESILLSKAETVTQDRTKNIEKSPTVTKDHVWGA 179
           L W+N E   R + +++    AE +   R    +  P    DH W A
Sbjct: 685 LSWVNDEKVSRGYLQALATKMAEELESLRNVGTQTLPARPLDHQWKA 731


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,524,815
Number of Sequences: 37866
Number of extensions: 349347
Number of successful extensions: 1179
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1166
Number of HSP's gapped (non-prelim): 14
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.