Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: USP17L7 Sequence: fasta or formatted (530aa) NCBI GI: 239749360
Description:

PREDICTED: Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt mRNA [530aa] PREDICTED: Inactive ubiquitin carboxyl-terminal hydrolase 17-like...
alt prot [530aa] PREDICTED: Inactive ubiquitin carboxyl-terminal hydrolase 17-like...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         37           2
 C cysteine            2.8         15           2
 D aspartate           4.9         26           2
 E glutamate           5.3         28           1
 F phenylalanine       3.0         16           1
 G glycine             5.1         27           2
 H histidine           4.7         25           2
 I isoleucine          2.6         14           1
 K lysine              6.8         36           2
 L leucine            10.9         58           2
 M methionine          2.1         11           1
 N asparagine          3.4         18           2
 P proline             4.9         26           2
 Q glutamine           7.2         38           2
 R arginine            4.5         24           2
 S serine              8.5         45           2
 T threonine           5.8         31           2
 V valine              5.5         29           1
 W tryptophan          1.3          7           1
 Y tyrosine            3.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... 
USP17L7               1.000   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
USP17L7               0.994   PREDICTED: Inactive ubiquitin carboxyl-terminal hydr...
USP17L8               0.910   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
USP17L4               0.909   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
LOC728373             0.908   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287513          0.908   PREDICTED: hypothetical protein XP_002342480 
LOC100287441          0.908   PREDICTED: hypothetical protein XP_002342478 
LOC100287178          0.908   PREDICTED: hypothetical protein XP_002342472 
LOC100287327          0.908   PREDICTED: hypothetical protein XP_002342475 
DUB3                  0.908   deubiquitinating enzyme 3 
LOC100287364          0.906   PREDICTED: hypothetical protein XP_002342476 
LOC100287404          0.904   PREDICTED: hypothetical protein XP_002342477 
LOC728379             0.904   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC728419             0.904   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.904   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.904   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.904   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728379             0.904   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728373             0.904   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728369             0.904   PREDICTED: similar to deubiquitinating enzyme 3 [Ho...
USP17                 0.903   ubiquitin specific peptidase 17 
USP17L5               0.902   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC100287478          0.902   PREDICTED: hypothetical protein XP_002342479 
LOC100287205          0.902   PREDICTED: hypothetical protein XP_002342473 
LOC100288520          0.900   PREDICTED: hypothetical protein XP_002342486 
LOC100287238          0.899   PREDICTED: hypothetical protein XP_002342474 
USP17L3               0.899   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC100287144          0.890   PREDICTED: hypothetical protein XP_002342471 
USP17L8               0.664   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press