Search of human proteins with 11125770

Search of human proteins with 11125770

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11125770 aminoacyl tRNA synthetase complex-interacting
multifunctional protein 2 [Homo sapiens]
         (320 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11125770 aminoacyl tRNA synthetase complex-interacting multif...   646   0.0  
gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens]             37   0.031
gi|23065544 glutathione S-transferase mu 1 isoform 1 [Homo sapiens]    33   0.44 
gi|4758862 eukaryotic translation elongation factor 1 epsilon 1 ...    31   1.7  
gi|208879470 eukaryotic translation elongation factor 1 epsilon ...    30   2.2  
gi|23065557 glutathione S-transferase mu 4 isoform 2 [Homo sapiens]    30   2.2  
gi|4504179 glutathione S-transferase mu 4 isoform 1 [Homo sapiens]     30   2.2  
gi|215277000 glutathione S-transferase mu 2 isoform 2 [Homo sapi...    30   2.9  
gi|4504175 glutathione S-transferase mu 2 isoform 1 [Homo sapiens]     30   2.9  
gi|23065563 glutathione S-transferase mu 5 [Homo sapiens]              30   2.9  
gi|23065552 glutathione S-transferase mu 3 [Homo sapiens]              30   3.7  
gi|50658069 phosphodiesterase 4D interacting protein isoform 2 [...    29   4.9  
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ...    29   4.9  
gi|50658077 phosphodiesterase 4D interacting protein isoform 4 [...    29   4.9  
gi|50658075 phosphodiesterase 4D interacting protein isoform 3 [...    29   4.9  
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]             29   4.9  
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap...    29   4.9  
gi|4506453 retinol-binding protein 3 precursor [Homo sapiens]          29   6.4  
gi|194294510 kinesin family member C3 isoform 2 [Homo sapiens]         28   8.3  
gi|194294508 kinesin family member C3 isoform 3 [Homo sapiens]         28   8.3  
gi|94536858 kinesin family member C3 isoform 1 [Homo sapiens]          28   8.3  
gi|221316634 LIM domain only 7 isoform 2 [Homo sapiens]                28   8.3  

>gi|11125770 aminoacyl tRNA synthetase complex-interacting
           multifunctional protein 2 [Homo sapiens]
          Length = 320

 Score =  646 bits (1667), Expect = 0.0
 Identities = 320/320 (100%), Positives = 320/320 (100%)

Query: 1   MPMYQVKPYHGGGAPLRVELPTCMYRLPNVHGRSYGPAPGAGHVQEESNLSLQALESRQD 60
           MPMYQVKPYHGGGAPLRVELPTCMYRLPNVHGRSYGPAPGAGHVQEESNLSLQALESRQD
Sbjct: 1   MPMYQVKPYHGGGAPLRVELPTCMYRLPNVHGRSYGPAPGAGHVQEESNLSLQALESRQD 60

Query: 61  DILKRLYELKAAVDGLSKMIQTPDADLDVTNIIQADEPTTLTTNALDLNSVLGKDYGALK 120
           DILKRLYELKAAVDGLSKMIQTPDADLDVTNIIQADEPTTLTTNALDLNSVLGKDYGALK
Sbjct: 61  DILKRLYELKAAVDGLSKMIQTPDADLDVTNIIQADEPTTLTTNALDLNSVLGKDYGALK 120

Query: 121 DIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQD 180
           DIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQD
Sbjct: 121 DIVINANPASPPLSLLVLHRLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQD 180

Query: 181 YQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLFSLFGQKHNAVNATLIDSWVDIA 240
           YQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLFSLFGQKHNAVNATLIDSWVDIA
Sbjct: 181 YQLGFTLIWKNVPKTQMKFSIQTMCPIEGEGNIARFLFSLFGQKHNAVNATLIDSWVDIA 240

Query: 241 IFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQIGGCSVTVPANVQ 300
           IFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQIGGCSVTVPANVQ
Sbjct: 241 IFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQIGGCSVTVPANVQ 300

Query: 301 RWMRSCENLAPFNTALKLLK 320
           RWMRSCENLAPFNTALKLLK
Sbjct: 301 RWMRSCENLAPFNTALKLLK 320


>gi|62241042 glutamyl-prolyl tRNA synthetase [Homo sapiens]
          Length = 1512

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 7/94 (7%)

Query: 226 NAVNATLIDSWVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVL 285
           N +  T ID W++ +  +L   S     +    +N  L    +L GN L++AD+ +W+ L
Sbjct: 71  NLMEHTEIDHWLEFSATKLS--SCDSFTSTINELNHCLSLRTYLVGNSLSLADLCVWATL 128

Query: 286 QQIGGCSVTV-----PANVQRWMRSCENLAPFNT 314
           +        +     P +V+RW    E    F +
Sbjct: 129 KGNAAWQEQLKQKKAPVHVKRWFGFLEAQQAFQS 162


>gi|23065544 glutathione S-transferase mu 1 isoform 1 [Homo sapiens]
          Length = 218

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 243 QLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVL 285
           +LK    +E     +  +  LGK PW AGN++T  D +++ VL
Sbjct: 122 KLKPKYLEELPEKLKLYSEFLGKRPWFAGNKITFVDFLVYDVL 164


>gi|4758862 eukaryotic translation elongation factor 1 epsilon 1
           isoform 1 [Homo sapiens]
          Length = 174

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 227 AVNATLIDSWVDIAIFQLKEGSSKEKA-AVFRSMNSALGKSPWLAGNELTVADVVLWSVL 285
           A    ++  W++  + Q+   SSK     + + +NS L    +L G   T+AD++L+  L
Sbjct: 65  AEEKAIVQQWLEYRVTQVDGHSSKNDIHTLLKDLNSYLEDKVYLTGYNFTLADILLYYGL 124

Query: 286 QQIGGCSVTVP-----ANVQRW 302
            +     +TV       NV RW
Sbjct: 125 HRF-IVDLTVQEKEKYLNVSRW 145


>gi|208879470 eukaryotic translation elongation factor 1 epsilon 1
           isoform 2 [Homo sapiens]
          Length = 139

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 227 AVNATLIDSWVDIAIFQLKEGSSKEKA-AVFRSMNSALGKSPWLAGNELTVADVVLW 282
           A    ++  W++  + Q+   SSK     + + +NS L    +L G   T+AD++L+
Sbjct: 65  AEEKAIVQQWLEYRVTQVDGHSSKNDIHTLLKDLNSYLEDKVYLTGYNFTLADILLY 121


>gi|23065557 glutathione S-transferase mu 4 isoform 2 [Homo sapiens]
          Length = 195

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 243 QLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVL 285
           +LK    +E   + +  +  LGK PW  G+++T  D + + VL
Sbjct: 122 KLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVL 164


>gi|4504179 glutathione S-transferase mu 4 isoform 1 [Homo sapiens]
          Length = 218

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 243 QLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVL 285
           +LK    +E   + +  +  LGK PW  G+++T  D + + VL
Sbjct: 122 KLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVL 164


>gi|215277000 glutathione S-transferase mu 2 isoform 2 [Homo
           sapiens]
          Length = 191

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 263 LGKSPWLAGNELTVADVVLWSVLQQ 287
           LGK PW  G+++T  D + + VL++
Sbjct: 142 LGKQPWFLGDKITFVDFIAYDVLER 166


>gi|4504175 glutathione S-transferase mu 2 isoform 1 [Homo sapiens]
          Length = 218

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 263 LGKSPWLAGNELTVADVVLWSVLQQ 287
           LGK PW  G+++T  D + + VL++
Sbjct: 142 LGKQPWFLGDKITFVDFIAYDVLER 166


>gi|23065563 glutathione S-transferase mu 5 [Homo sapiens]
          Length = 218

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 243 QLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVL 285
           +LK    +E     +  +  LGK PW AG+++T  D + + VL
Sbjct: 122 KLKPKYLEELPEKLKLYSEFLGKRPWFAGDKITFVDFLAYDVL 164


>gi|23065552 glutathione S-transferase mu 3 [Homo sapiens]
          Length = 225

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 243 QLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADVVLWSVLQQ 287
           +LK    +E     +  +  LGK  W AG +LT  D + + +L Q
Sbjct: 126 KLKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQ 170


>gi|50658069 phosphodiesterase 4D interacting protein isoform 2
          [Homo sapiens]
          Length = 969

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 53 QALESRQDDILKRLYELKAAVDGLSKMIQTPDADLDVT 90
          Q  E+ ++DI KR  ELK  V+ L + +Q     LD T
Sbjct: 35 QKYEASREDIYKRNIELKVEVESLKRELQDKKQHLDKT 72


>gi|157311604 phosphodiesterase 4D interacting protein isoform 1
          [Homo sapiens]
          Length = 2346

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 53 QALESRQDDILKRLYELKAAVDGLSKMIQTPDADLDVT 90
          Q  E+ ++DI KR  ELK  V+ L + +Q     LD T
Sbjct: 35 QKYEASREDIYKRNIELKVEVESLKRELQDKKQHLDKT 72


>gi|50658077 phosphodiesterase 4D interacting protein isoform 4
          [Homo sapiens]
          Length = 173

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 53 QALESRQDDILKRLYELKAAVDGLSKMIQTPDADLDVT 90
          Q  E+ ++DI KR  ELK  V+ L + +Q     LD T
Sbjct: 35 QKYEASREDIYKRNIELKVEVESLKRELQDKKQHLDKT 72


>gi|50658075 phosphodiesterase 4D interacting protein isoform 3
           [Homo sapiens]
          Length = 310

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 53  QALESRQDDILKRLYELKAAVDGLSKMIQTPDADLDVT 90
           Q  E+ ++DI KR  ELK  V+ L + +Q     LD T
Sbjct: 172 QKYEASREDIYKRNIELKVEVESLKRELQDKKQHLDKT 209


>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
          Length = 1016

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 28  PNVHGRSYGPAPGAGHVQEESNLSLQALESRQDDILKRLYELKAAVDGLSKMIQTPDADL 87
           P V G S GP  G       S  +LQAL+    +++     L  +++ L   ++   ADL
Sbjct: 616 PGVGGPSRGPLDGFSVFGGSSGSALQALQGELSEVILSFSSLNDSLNELQTTVEGQGADL 675


>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
           sapiens]
          Length = 735

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 141 LLCEHFRVLSTVHTHSSVKSVPENLLKCFG 170
           LL +H R++S+ H ++  +  P+NL  CFG
Sbjct: 531 LLLDHLRLVSSFHAYN--RMTPQNLAVCFG 558


>gi|4506453 retinol-binding protein 3 precursor [Homo sapiens]
          Length = 1247

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 96  DEPTTLTTNALDLNSVLGKDYGALKDIVI 124
           + P+  TT    L  VLG+ YGA KD+V+
Sbjct: 201 NRPSNTTTEIWTLPQVLGERYGADKDVVV 229


>gi|194294510 kinesin family member C3 isoform 2 [Homo sapiens]
          Length = 826

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 16  LRVELPTCMYRLPNVHGRSYGPAPGAGHVQEESNL 50
           LR E+  C   L  +  +  GP PG  H QE + L
Sbjct: 146 LRQEMRRCEAELQELRTKPAGPCPGCEHSQESAQL 180


>gi|194294508 kinesin family member C3 isoform 3 [Homo sapiens]
          Length = 687

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 16 LRVELPTCMYRLPNVHGRSYGPAPGAGHVQEESNL 50
          LR E+  C   L  +  +  GP PG  H QE + L
Sbjct: 7  LRQEMRRCEAELQELRTKPAGPCPGCEHSQESAQL 41


>gi|94536858 kinesin family member C3 isoform 1 [Homo sapiens]
          Length = 833

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 16  LRVELPTCMYRLPNVHGRSYGPAPGAGHVQEESNL 50
           LR E+  C   L  +  +  GP PG  H QE + L
Sbjct: 146 LRQEMRRCEAELQELRTKPAGPCPGCEHSQESAQL 180


>gi|221316634 LIM domain only 7 isoform 2 [Homo sapiens]
          Length = 1385

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 177 PRQDYQLGFTLIWKNVPKTQMKFS--IQTMCPIEGEGNIARFLFSLFGQKHNAVNATLID 234
           P + + + F   W   P+ Q KF   ++  CP + + N  R L   + QK + +    I 
Sbjct: 302 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 361

Query: 235 SW 236
           SW
Sbjct: 362 SW 363


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,523,126
Number of Sequences: 37866
Number of extensions: 532631
Number of successful extensions: 1414
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1395
Number of HSP's gapped (non-prelim): 24
length of query: 320
length of database: 18,247,518
effective HSP length: 102
effective length of query: 218
effective length of database: 14,385,186
effective search space: 3135970548
effective search space used: 3135970548
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.