Guide to the Human Genome
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Name: AIMP2 Sequence: fasta or formatted (320aa) NCBI GI: 11125770
Description:

aminoacyl tRNA synthetase complex-interacting multifunctional protein 2

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         24           2
 C cysteine            1.9          6           1
 D aspartate           4.4         14           2
 E glutamate           4.7         15           2
 F phenylalanine       3.1         10           1
 G glycine             6.2         20           3
 H histidine           2.5          8           1
 I isoleucine          4.4         14           2
 K lysine              6.2         20           2
 L leucine            12.5         40           2
 M methionine          2.5          8           1
 N asparagine          5.6         18           1
 P proline             5.9         19           2
 Q glutamine           5.3         17           2
 R arginine            3.8         12           1
 S serine              7.2         23           2
 T threonine           5.0         16           2
 V valine              7.5         24           2
 W tryptophan          1.6          5           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aminoacyl tRNA synthetase complex-interacting multif... 
EPRS                  0.019   glutamyl-prolyl tRNA synthetase 
GSTM1                 0.013   glutathione S-transferase mu 1 isoform 1 
EEF1E1                0.010   eukaryotic translation elongation factor 1 epsilon 1 ...
EEF1E1                0.008   eukaryotic translation elongation factor 1 epsilon ...
GSTM4                 0.008   glutathione S-transferase mu 4 isoform 2 
GSTM4                 0.008   glutathione S-transferase mu 4 isoform 1 
GSTM2                 0.008   glutathione S-transferase mu 2 isoform 2 
GSTM2                 0.008   glutathione S-transferase mu 2 isoform 1 
GSTM5                 0.008   glutathione S-transferase mu 5 
GSTM3                 0.008   glutathione S-transferase mu 3 
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 1 ...
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 4 [...
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 3 [...
EMILIN1               0.006   elastin microfibril interfacer 1 
SYDE1                 0.006   synapse defective 1, Rho GTPase, homolog 1 
RBP3                  0.006   retinol-binding protein 3 precursor 
KIFC3                 0.005   kinesin family member C3 isoform 2 
KIFC3                 0.005   kinesin family member C3 isoform 3 
KIFC3                 0.005   kinesin family member C3 isoform 1 
LMO7                  0.005   LIM domain only 7 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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