Search of human proteins with 169170962

Search of human proteins with 169170962

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169170962 PREDICTED: similar to hCG1804306 [Homo sapiens]
         (271 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169171357 PREDICTED: similar to hCG1804306 [Homo sapiens]          548   e-156
gi|169172220 PREDICTED: similar to hCG1804306 [Homo sapiens]          548   e-156
gi|169170962 PREDICTED: similar to hCG1804306 [Homo sapiens]          548   e-156
gi|239508768 PREDICTED: similar to hCG1804306 [Homo sapiens]          548   e-156
gi|4506129 phosphoribosyl pyrophosphate synthetase 2 isoform 2 [...   114   7e-26
gi|4506127 phosphoribosyl pyrophosphate synthetase 1 [Homo sapiens]   109   2e-24
gi|84875539 phosphoribosyl pyrophosphate synthetase 2 isoform 1 ...   109   3e-24
gi|28557709 phosphoribosyl pyrophosphate synthetase 1-like 1 [Ho...   107   1e-23
gi|4506133 phosphoribosyl pyrophosphate synthetase-associated pr...    48   1e-05
gi|122939157 gemin 4 [Homo sapiens]                                    31   1.3  
gi|28373065 potassium voltage-gated channel, KQT-like subfamily,...    30   2.9  
gi|11321607 thyroid hormone receptor interactor 13 [Homo sapiens]      29   5.0  
gi|239757727 PREDICTED: similar to hCG2013141 [Homo sapiens]           28   6.5  
gi|239752218 PREDICTED: hypothetical protein XP_002348134 [Homo ...    28   6.5  

>gi|169171357 PREDICTED: similar to hCG1804306 [Homo sapiens]
          Length = 271

 Score =  548 bits (1412), Expect = e-156
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV 60
           MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV
Sbjct: 1   MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV 60

Query: 61  KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM 120
           KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM
Sbjct: 61  KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM 120

Query: 121 KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI 180
           KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI
Sbjct: 121 KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI 180

Query: 181 PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE 240
           PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE
Sbjct: 181 PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE 240

Query: 241 PSEVGHTPVGVGCVALWWGSFRLGQATPPAP 271
           PSEVGHTPVGVGCVALWWGSFRLGQATPPAP
Sbjct: 241 PSEVGHTPVGVGCVALWWGSFRLGQATPPAP 271


>gi|169172220 PREDICTED: similar to hCG1804306 [Homo sapiens]
          Length = 271

 Score =  548 bits (1412), Expect = e-156
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV 60
           MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV
Sbjct: 1   MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV 60

Query: 61  KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM 120
           KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM
Sbjct: 61  KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM 120

Query: 121 KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI 180
           KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI
Sbjct: 121 KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI 180

Query: 181 PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE 240
           PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE
Sbjct: 181 PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE 240

Query: 241 PSEVGHTPVGVGCVALWWGSFRLGQATPPAP 271
           PSEVGHTPVGVGCVALWWGSFRLGQATPPAP
Sbjct: 241 PSEVGHTPVGVGCVALWWGSFRLGQATPPAP 271


>gi|169170962 PREDICTED: similar to hCG1804306 [Homo sapiens]
          Length = 271

 Score =  548 bits (1412), Expect = e-156
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV 60
           MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV
Sbjct: 1   MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV 60

Query: 61  KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM 120
           KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM
Sbjct: 61  KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM 120

Query: 121 KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI 180
           KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI
Sbjct: 121 KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI 180

Query: 181 PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE 240
           PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE
Sbjct: 181 PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE 240

Query: 241 PSEVGHTPVGVGCVALWWGSFRLGQATPPAP 271
           PSEVGHTPVGVGCVALWWGSFRLGQATPPAP
Sbjct: 241 PSEVGHTPVGVGCVALWWGSFRLGQATPPAP 271


>gi|239508768 PREDICTED: similar to hCG1804306 [Homo sapiens]
          Length = 271

 Score =  548 bits (1412), Expect = e-156
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV 60
           MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV
Sbjct: 1   MPCEPEALSAWATQAHSGSGSSFLAPDITTLSIPWLHQAPAMSNMVLLGSSSLGLAQKVV 60

Query: 61  KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM 120
           KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM
Sbjct: 61  KRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKATWSSGM 120

Query: 121 KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI 180
           KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI
Sbjct: 121 KAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDI 180

Query: 181 PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE 240
           PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE
Sbjct: 181 PNACGTTHDSADKLLLDEVRRFSPHLVGRVGVSKLQPEAAAELRNCLYLWGWTAASSLEE 240

Query: 241 PSEVGHTPVGVGCVALWWGSFRLGQATPPAP 271
           PSEVGHTPVGVGCVALWWGSFRLGQATPPAP
Sbjct: 241 PSEVGHTPVGVGCVALWWGSFRLGQATPPAP 271


>gi|4506129 phosphoribosyl pyrophosphate synthetase 2 isoform 2
           [Homo sapiens]
          Length = 318

 Score =  114 bits (286), Expect = 7e-26
 Identities = 70/145 (48%), Positives = 90/145 (62%), Gaps = 6/145 (4%)

Query: 42  MSNMVLL-GSSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIV--- 97
           M N+VL  GSS   L+Q+V  R GLELGKVVTKKFSNQE S+  GE +R +  Y+I    
Sbjct: 1   MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60

Query: 98  -KINDTLTSLA-MTNVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAG 155
            +IND L  L  M N CK   SS + AV+ C PYA+QD+KDKS   +SAKLVAN+ SVAG
Sbjct: 61  GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG 120

Query: 156 RSVGVDRMFLVGDIKDWVAVLVDDI 180
               +        I+ +  + VD++
Sbjct: 121 ADHIITMDLHASQIQGFFDIPVDNL 145



 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 160 VDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLL 195
           VDRM LVGD+KD VA+LVDD+ + CGT   +ADKLL
Sbjct: 202 VDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 237


>gi|4506127 phosphoribosyl pyrophosphate synthetase 1 [Homo sapiens]
          Length = 318

 Score =  109 bits (273), Expect = 2e-24
 Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 5/140 (3%)

Query: 46  VLLGSSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIV----KIND 101
           +  GSS   L+QK+  R GLELGKVVTKKFSNQE  +  GE +R +  Y++     +IND
Sbjct: 6   IFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIND 65

Query: 102 TLTSLA-MTNVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGV 160
            L  L  M N CK   +S + AV+ C PYA+QD+KDKS   +SAKLVAN+ SVAG    +
Sbjct: 66  NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 125

Query: 161 DRMFLVGDIKDWVAVLVDDI 180
                   I+ +  + VD++
Sbjct: 126 TMDLHASQIQGFFDIPVDNL 145



 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 160 VDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLL 195
           VDRM LVGD+KD VA+LVDD+ + CGT   +ADKLL
Sbjct: 202 VDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 237


>gi|84875539 phosphoribosyl pyrophosphate synthetase 2 isoform 1
           [Homo sapiens]
          Length = 321

 Score =  109 bits (272), Expect = 3e-24
 Identities = 70/148 (47%), Positives = 90/148 (60%), Gaps = 9/148 (6%)

Query: 42  MSNMVLL-GSSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIV--- 97
           M N+VL  GSS   L+Q+V  R GLELGKVVTKKFSNQE S+  GE +R +  Y+I    
Sbjct: 1   MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC 60

Query: 98  -KINDTLTS-LAMTNVCKATWSSGMKAVLSCSPYAQQDQKDK---SHPAVSAKLVANVFS 152
            +IND L   L M N CK   SS + AV+ C PYA+QD+KDK   S   +SAKLVAN+ S
Sbjct: 61  GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKVGESRAPISAKLVANMLS 120

Query: 153 VAGRSVGVDRMFLVGDIKDWVAVLVDDI 180
           VAG    +        I+ +  + VD++
Sbjct: 121 VAGADHIITMDLHASQIQGFFDIPVDNL 148



 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 160 VDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLL 195
           VDRM LVGD+KD VA+LVDD+ + CGT   +ADKLL
Sbjct: 205 VDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL 240


>gi|28557709 phosphoribosyl pyrophosphate synthetase 1-like 1 [Homo
           sapiens]
          Length = 318

 Score =  107 bits (266), Expect = 1e-23
 Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 5/140 (3%)

Query: 46  VLLGSSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIV----KIND 101
           +  GSS   L+QK+  R GLELGKVVTKKFSNQE  +   E +R +  Y++     +IND
Sbjct: 6   IFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGCGEIND 65

Query: 102 TLTSLA-MTNVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGV 160
           +L  L  M N CK   +S + AV+ C PYA+QD+KDKS   +SAKLVAN+ S+AG    +
Sbjct: 66  SLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAGADHII 125

Query: 161 DRMFLVGDIKDWVAVLVDDI 180
                   I+ +  + VD++
Sbjct: 126 TMDLHASQIQGFFDIPVDNL 145



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 160 VDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLL 195
           VD + LVGD+ D VA+LVDD+ + C T   +ADKLL
Sbjct: 202 VDCIVLVGDVNDRVAILVDDMADTCVTICLAADKLL 237


>gi|4506133 phosphoribosyl pyrophosphate synthetase-associated
           protein 2 [Homo sapiens]
          Length = 369

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 50  SSSLGLAQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTS---- 105
           SS + L++K+ +R G+E+GKV   +  N+E  +   E +R +  ++I  ++  + +    
Sbjct: 29  SSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIME 88

Query: 106 -LAMTNVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAG 155
            L M   CK + +  +  V+   PY++Q +  K    VS KL+A++   AG
Sbjct: 89  LLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVS-KLLASMMCKAG 138


>gi|122939157 gemin 4 [Homo sapiens]
          Length = 1058

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 16/146 (10%)

Query: 96  IVKINDTLTSLAMTN-----VCKATWSSGMKAVLSC------SPYAQQDQKDKSHPAVSA 144
           +  + D LT  A+T      V    +   +  V+S       +PY QQ   +K   A   
Sbjct: 240 LANLADMLTVFALTEDDPQEVSATVYLDKLATVISVWNSDTQNPYHQQALAEKVKEAERD 299

Query: 145 KLVANVFSVAGRSVGVDRMFLVGDIKDWVAVLVDDIPNACGTTHDSADKLLLDEVRRFSP 204
             + ++  +   ++ V   FL   +++W   L   + ++ GT++DS    L D +  FS 
Sbjct: 300 VSLTSLAKLPSETIFVGCEFLHHLLREWGEELQAVLRSSQGTSYDS--YRLCDSLTSFSQ 357

Query: 205 H---LVGRVGVSKLQPEAAAELRNCL 227
           +    + R  +SK   +  +EL  C+
Sbjct: 358 NATLYLNRTSLSKEDRQVVSELAECV 383


>gi|28373065 potassium voltage-gated channel, KQT-like subfamily,
           member 5 isoform 1 [Homo sapiens]
          Length = 932

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 110 NVCKATWSSGMKAVLSCSPYAQQDQKDKSHPAVSAKLVANVFSVAGRSVGVDRMFLVGD 168
           +V  ATW   +KA+ +CSP  ++  +  S   +S K    + S  G+S+   R   VGD
Sbjct: 387 SVSIATWKPHLKALHTCSPTKKEQGEASSSQKLSFKERVRMASPRGQSI-KSRQASVGD 444


>gi|11321607 thyroid hormone receptor interactor 13 [Homo sapiens]
          Length = 432

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)

Query: 56  AQKVVKRWGLELGKVVTKKFSNQEVSIVSGERMRDQAAYVIVKINDTLTSLAMTNVCKA 114
           +  +  +W  E GK+VTK F   +      + + D+ A V V I++  +  A  N C+A
Sbjct: 214 SHSLFSKWFSESGKLVTKMFQKIQ------DLIDDKDALVFVLIDEVESLTAARNACRA 266


>gi|239757727 PREDICTED: similar to hCG2013141 [Homo sapiens]
          Length = 133

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 6  EALSAWATQAHSGSGSSFLA--PDITTLSI-PWLHQAPA 41
          E LS WA+    G+GS   A  P +TTL + P L   PA
Sbjct: 42 EGLSTWASSCRGGTGSPSTAGLPALTTLELSPGLSHLPA 80


>gi|239752218 PREDICTED: hypothetical protein XP_002348134 [Homo
          sapiens]
          Length = 133

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 6  EALSAWATQAHSGSGSSFLA--PDITTLSI-PWLHQAPA 41
          E LS WA+    G+GS   A  P +TTL + P L   PA
Sbjct: 42 EGLSTWASSCRGGTGSPSTAGLPALTTLELSPGLSHLPA 80


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.130    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,981,401
Number of Sequences: 37866
Number of extensions: 381996
Number of successful extensions: 876
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 854
Number of HSP's gapped (non-prelim): 20
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.