Search of human proteins with 169167993

Search of human proteins with 169167993

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169167993 PREDICTED: hypothetical protein [Homo sapiens]
         (302 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169167993 PREDICTED: hypothetical protein [Homo sapiens]           598   e-171
gi|169167430 PREDICTED: hypothetical protein [Homo sapiens]           598   e-171
gi|188497683 FAST kinase domains 1 [Homo sapiens]                     407   e-114
gi|115583683 hypothetical protein LOC253714 [Homo sapiens]             35   0.081
gi|31657092 ATP binding cassette, sub-family A (ABC1), member 13...    29   4.5  
gi|218505703 von Willebrand factor A domain containing 3A [Homo ...    29   5.8  
gi|38788416 laminin, alpha 1 precursor [Homo sapiens]                  28   10.0 
gi|187960079 MAD2 homolog [Homo sapiens]                               28   10.0 
gi|187960073 MAD2 homolog [Homo sapiens]                               28   10.0 
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof...    28   10.0 
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof...    28   10.0 

>gi|169167993 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score =  598 bits (1541), Expect = e-171
 Identities = 302/302 (100%), Positives = 302/302 (100%)

Query: 1   MPVALLQCCVEDLVKNQIVLSLTLEISYRRFCLPKKICDVNQKTSVCLDSLVTNMLRLRA 60
           MPVALLQCCVEDLVKNQIVLSLTLEISYRRFCLPKKICDVNQKTSVCLDSLVTNMLRLRA
Sbjct: 1   MPVALLQCCVEDLVKNQIVLSLTLEISYRRFCLPKKICDVNQKTSVCLDSLVTNMLRLRA 60

Query: 61  ICPFSWTVFQFRLISCEPLIIQMNKCIDEEQIFDFIERNKIILSEKQVGCTFNILWKLQK 120
           ICPFSWTVFQFRLISCEPLIIQMNKCIDEEQIFDFIERNKIILSEKQVGCTFNILWKLQK
Sbjct: 61  ICPFSWTVFQFRLISCEPLIIQMNKCIDEEQIFDFIERNKIILSEKQVGCTFNILWKLQK 120

Query: 121 QKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGNTLVNVLYITQQFDIKLLSEFSSCLA 180
           QKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGNTLVNVLYITQQFDIKLLSEFSSCLA
Sbjct: 121 QKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGNTLVNVLYITQQFDIKLLSEFSSCLA 180

Query: 181 DQHLYFSPLMGKIADIVHRNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTT 240
           DQHLYFSPLMGKIADIVHRNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTT
Sbjct: 181 DQHLYFSPLMGKIADIVHRNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTT 240

Query: 241 DSSEVNVAKRMVQFLRNFRYHYQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELT 300
           DSSEVNVAKRMVQFLRNFRYHYQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELT
Sbjct: 241 DSSEVNVAKRMVQFLRNFRYHYQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELT 300

Query: 301 NE 302
           NE
Sbjct: 301 NE 302


>gi|169167430 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score =  598 bits (1541), Expect = e-171
 Identities = 302/302 (100%), Positives = 302/302 (100%)

Query: 1   MPVALLQCCVEDLVKNQIVLSLTLEISYRRFCLPKKICDVNQKTSVCLDSLVTNMLRLRA 60
           MPVALLQCCVEDLVKNQIVLSLTLEISYRRFCLPKKICDVNQKTSVCLDSLVTNMLRLRA
Sbjct: 1   MPVALLQCCVEDLVKNQIVLSLTLEISYRRFCLPKKICDVNQKTSVCLDSLVTNMLRLRA 60

Query: 61  ICPFSWTVFQFRLISCEPLIIQMNKCIDEEQIFDFIERNKIILSEKQVGCTFNILWKLQK 120
           ICPFSWTVFQFRLISCEPLIIQMNKCIDEEQIFDFIERNKIILSEKQVGCTFNILWKLQK
Sbjct: 61  ICPFSWTVFQFRLISCEPLIIQMNKCIDEEQIFDFIERNKIILSEKQVGCTFNILWKLQK 120

Query: 121 QKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGNTLVNVLYITQQFDIKLLSEFSSCLA 180
           QKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGNTLVNVLYITQQFDIKLLSEFSSCLA
Sbjct: 121 QKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGNTLVNVLYITQQFDIKLLSEFSSCLA 180

Query: 181 DQHLYFSPLMGKIADIVHRNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTT 240
           DQHLYFSPLMGKIADIVHRNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTT
Sbjct: 181 DQHLYFSPLMGKIADIVHRNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTT 240

Query: 241 DSSEVNVAKRMVQFLRNFRYHYQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELT 300
           DSSEVNVAKRMVQFLRNFRYHYQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELT
Sbjct: 241 DSSEVNVAKRMVQFLRNFRYHYQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELT 300

Query: 301 NE 302
           NE
Sbjct: 301 NE 302


>gi|188497683 FAST kinase domains 1 [Homo sapiens]
          Length = 847

 Score =  407 bits (1045), Expect = e-114
 Identities = 226/338 (66%), Positives = 241/338 (71%), Gaps = 77/338 (22%)

Query: 42  QKTSVCLDSLVTNMLRLRAICPFSWTVFQFRLISCEPLIIQMNKCIDEEQIFDFIERNKI 101
           +KT V L+SLVTNMLRLRAICPFSW VFQFR ISCEPLIIQMNKC DEEQ+F FIERNK 
Sbjct: 2   KKTPVFLESLVTNMLRLRAICPFSWRVFQFRPISCEPLIIQMNKCTDEEQMFGFIERNKA 61

Query: 102 ILSEKQVGCTFNILWKLQKQKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGNTLVNVL 161
           ILSEKQVGC F++LWKLQKQK SLLKN EYVRDH QFLTLHNLATNKFKLMN +TLVNVL
Sbjct: 62  ILSEKQVGCAFDMLWKLQKQKTSLLKNAEYVRDHPQFLTLHNLATNKFKLMNDDTLVNVL 121

Query: 162 YITQQ-----------------------FDIKLLSEFSSCLADQHLYFSPLMGKIADIVH 198
           Y+TQQ                       FDIKLLSEFSSCLADQHLYFSPLMGKIADIVH
Sbjct: 122 YVTQQFAGEAHDPLVEALVTEAWRRLERFDIKLLSEFSSCLADQHLYFSPLMGKIADIVH 181

Query: 199 RNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTTDSSEVNVAKRMVQFLRNF 258
           RNLET Q+LSSLSVLMVNISSLISRHFQ+QLVNKTEL+FDT DSSEVNVAK + +FLRN 
Sbjct: 182 RNLETTQDLSSLSVLMVNISSLISRHFQQQLVNKTELLFDTIDSSEVNVAKSIAKFLRNV 241

Query: 259 RYHYQPLLE-------------------------SFVKF--------------------- 272
           RY YQPLLE                          F++F                     
Sbjct: 242 RYRYQPLLERCNNVFLSNVDHLDLDSISKILSVYKFLQFNSFEFIIMAKKKLTEMIPLCN 301

Query: 273 --------FVALGPIAGPEEKKQLKSTMLLMSEELTNE 302
                   FVALGPIAGPEEKKQLKSTMLLMSE+LT E
Sbjct: 302 HPASFVKLFVALGPIAGPEEKKQLKSTMLLMSEDLTGE 339


>gi|115583683 hypothetical protein LOC253714 [Homo sapiens]
          Length = 1243

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 204 IQNLSSLSVLMV--NISSLISRHFQEQLVNKTELVFDTTDSSEVNVAKRMVQFLRNFRYH 261
           I+NLS    L++  N+   + + + +QLV  T L+F+ ++   +  +K  V++L      
Sbjct: 826 IKNLSGPDDLLIDKNLEEAVEKEYMKQLVKLTRLLFNLSEVKSI-FSKAQVEYLS----I 880

Query: 262 YQPLLESFVKFFVALGPIAGPEEKKQLKSTMLLMSEELTNE 302
            +   ++ V+FF A+G   G  +    KS M+  S E   E
Sbjct: 881 SEDPKKALVRFFEAVGVTYGNVQTLSDKSAMVTKSLEYLGE 921


>gi|31657092 ATP binding cassette, sub-family A (ABC1), member 13
            [Homo sapiens]
          Length = 5058

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 159  NVLYITQQFDIKLLSEFSSCLADQHLYFSPLMGKIADIVHRNLETIQNLSSLSVLMVNIS 218
            +V ++T   + + L+ FS     Q L+ + L+  I ++   + E   NL+   + ++N  
Sbjct: 2182 DVAFLTHLLNQEQLTNFSVV---QLLFENILINLINNLAGNSQEAAWNLNDTDLQIMNFI 2238

Query: 219  SLISRHFQEQLVNKTEL 235
            +LI  H Q +   KT L
Sbjct: 2239 NLILNHMQSETSRKTVL 2255


>gi|218505703 von Willebrand factor A domain containing 3A [Homo
           sapiens]
          Length = 1184

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 24/112 (21%), Positives = 57/112 (50%), Gaps = 15/112 (13%)

Query: 193 IADIVHRNLETIQNLSSLSVLMVNISSLISRHFQEQLVNKTELVFDTTDSSEVNVAKRMV 252
           +AD++ +  E ++  +++ V  +  S+ I RHF+ +L            S  + V +  +
Sbjct: 106 LADLISQGTEVLEEGTNV-VQKICFSTQIIRHFESKL------------SDTIEVYQERI 152

Query: 253 QFL-RNFRYHYQPLLESFVKFFVALGPIA-GPEEKKQLKSTMLLMSEELTNE 302
           Q+L  N +  +  +  + V   + +  I+ GP++++  K  M L+ E+L+++
Sbjct: 153 QWLTENSKKAFGLIKGARVSILIDVSAISSGPQKEEFQKDLMSLIDEQLSHK 204


>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
          Length = 3075

 Score = 28.1 bits (61), Expect = 10.0
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 9/74 (12%)

Query: 192  KIADIVHRNLETIQNLS----SLSVLMVNISSLISRHFQ-----EQLVNKTELVFDTTDS 242
            ++AD+++  LE I+N+S    S + +  NI SLI    +      + V +T L+ ++  S
Sbjct: 1880 RLADVLYSGLENIRNVSLNATSAAYVHYNIQSLIEESEELARDAHRTVTETSLLSESLVS 1939

Query: 243  SEVNVAKRMVQFLR 256
            +     +R  +FL+
Sbjct: 1940 NGKAAVQRSSRFLK 1953


>gi|187960079 MAD2 homolog [Homo sapiens]
          Length = 211

 Score = 28.1 bits (61), Expect = 10.0
 Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 102 ILSEKQVGCTFNILWKLQK------QKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGN 155
           +L     GCTF +L   ++      +KI ++K+  ++    Q + +H+      K M  +
Sbjct: 136 VLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLIPLKTMTSD 195

Query: 156 TLVNVLYITQQ 166
            L   LY+ ++
Sbjct: 196 ILKMQLYVEER 206


>gi|187960073 MAD2 homolog [Homo sapiens]
          Length = 211

 Score = 28.1 bits (61), Expect = 10.0
 Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 102 ILSEKQVGCTFNILWKLQK------QKISLLKNVEYVRDHSQFLTLHNLATNKFKLMNGN 155
           +L     GCTF +L   ++      +KI ++K+  ++    Q + +H+      K M  +
Sbjct: 136 VLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLIPLKTMTSD 195

Query: 156 TLVNVLYITQQ 166
            L   LY+ ++
Sbjct: 196 ILKMQLYVEER 206


>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
           1 [Homo sapiens]
          Length = 1722

 Score = 28.1 bits (61), Expect = 10.0
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 14/136 (10%)

Query: 91  QIFDFIERNKIILSEKQVGCTFNILWKLQKQKISLLKNVEYVRDHSQFLTLHNLATNKFK 150
           +IF   ++ KI+  ++ V C  N+   L K +I              + TL  + T  F+
Sbjct: 754 EIFKQNQQKKIVRRKRPVKCPANMTPALDKLEILRC---------GPWDTLQQVTTVTFQ 804

Query: 151 LMNGNTLVNVLYITQQFDIKLLSEFSSCLADQHLYFSPLMGKIADIVHRNLETI--QNLS 208
            + G  L  +   T   +++ LS     L   H   +    K  D    ++E I  +NL 
Sbjct: 805 DLPGCVLSTLAECT---NLQFLSLRRCGLTSLHSLSNCKKLKYIDAQENHIEAIECENLE 861

Query: 209 SLSVLMVNISSLISRH 224
           +L V+++N + L S H
Sbjct: 862 NLCVVLLNKNQLTSLH 877


>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
           2 [Homo sapiens]
          Length = 1336

 Score = 28.1 bits (61), Expect = 10.0
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 14/136 (10%)

Query: 91  QIFDFIERNKIILSEKQVGCTFNILWKLQKQKISLLKNVEYVRDHSQFLTLHNLATNKFK 150
           +IF   ++ KI+  ++ V C  N+   L K +I              + TL  + T  F+
Sbjct: 754 EIFKQNQQKKIVRRKRPVKCPANMTPALDKLEILRC---------GPWDTLQQVTTVTFQ 804

Query: 151 LMNGNTLVNVLYITQQFDIKLLSEFSSCLADQHLYFSPLMGKIADIVHRNLETI--QNLS 208
            + G  L  +   T   +++ LS     L   H   +    K  D    ++E I  +NL 
Sbjct: 805 DLPGCVLSTLAECT---NLQFLSLRRCGLTSLHSLSNCKKLKYIDAQENHIEAIECENLE 861

Query: 209 SLSVLMVNISSLISRH 224
           +L V+++N + L S H
Sbjct: 862 NLCVVLLNKNQLTSLH 877


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.137    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,582,200
Number of Sequences: 37866
Number of extensions: 360734
Number of successful extensions: 1047
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1038
Number of HSP's gapped (non-prelim): 13
length of query: 302
length of database: 18,247,518
effective HSP length: 102
effective length of query: 200
effective length of database: 14,385,186
effective search space: 2877037200
effective search space used: 2877037200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.