Search of human proteins with 169167696

Search of human proteins with 169167696

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169167696 PREDICTED: hypothetical protein [Homo sapiens]
         (313 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169167696 PREDICTED: hypothetical protein [Homo sapiens]           653   0.0  
gi|169168219 PREDICTED: hypothetical protein [Homo sapiens]           629   e-180
gi|169167981 PREDICTED: hypothetical protein [Homo sapiens]           264   7e-71
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]       35   0.086
gi|5174547 mitogen-activated protein kinase kinase kinase 5 [Hom...    32   0.95 
gi|116734704 interferon regulatory factor 2 binding protein 2 is...    32   0.95 
gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo s...    30   2.8  
gi|21955174 kinesin family member C2 [Homo sapiens]                    29   4.7  
gi|126032338 ryanodine receptor 3 [Homo sapiens]                       29   6.2  
gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens]         29   6.2  
gi|116734706 interferon regulatory factor 2 binding protein 2 is...    29   6.2  
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi...    28   8.0  
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof...    28   8.0  
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof...    28   8.0  

>gi|169167696 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 313

 Score =  653 bits (1685), Expect = 0.0
 Identities = 313/313 (100%), Positives = 313/313 (100%)

Query: 1   MIGENIVNCNESVLKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGLEEGCR 60
           MIGENIVNCNESVLKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGLEEGCR
Sbjct: 1   MIGENIVNCNESVLKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGLEEGCR 60

Query: 61  LPMFMTRSRTKPHAPGERIHGTQETPSCSPTHLVDSHVLLQLWLLQKQKPAVDSGGAEEL 120
           LPMFMTRSRTKPHAPGERIHGTQETPSCSPTHLVDSHVLLQLWLLQKQKPAVDSGGAEEL
Sbjct: 61  LPMFMTRSRTKPHAPGERIHGTQETPSCSPTHLVDSHVLLQLWLLQKQKPAVDSGGAEEL 120

Query: 121 RGICKVKVLWCPLQGSFPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKKTIDFYFVLD 180
           RGICKVKVLWCPLQGSFPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKKTIDFYFVLD
Sbjct: 121 RGICKVKVLWCPLQGSFPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKKTIDFYFVLD 180

Query: 181 SSSSSFHDKKHWTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLS 240
           SSSSSFHDKKHWTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLS
Sbjct: 181 SSSSSFHDKKHWTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLS 240

Query: 241 GTGQDTEGMELVTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGG 300
           GTGQDTEGMELVTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGG
Sbjct: 241 GTGQDTEGMELVTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGG 300

Query: 301 GTAGSCQVQCSYL 313
           GTAGSCQVQCSYL
Sbjct: 301 GTAGSCQVQCSYL 313


>gi|169168219 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 349

 Score =  629 bits (1621), Expect = e-180
 Identities = 300/302 (99%), Positives = 302/302 (100%)

Query: 12  SVLKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGLEEGCRLPMFMTRSRTK 71
           ++LKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGLEEGCRLPMFMTRSRTK
Sbjct: 48  TILKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGLEEGCRLPMFMTRSRTK 107

Query: 72  PHAPGERIHGTQETPSCSPTHLVDSHVLLQLWLLQKQKPAVDSGGAEELRGICKVKVLWC 131
           PHAPGERIHGTQETPSCSPTHLVDSHVLLQLWLLQKQKPAVDSGGAEELRGICKVKVLWC
Sbjct: 108 PHAPGERIHGTQETPSCSPTHLVDSHVLLQLWLLQKQKPAVDSGGAEELRGICKVKVLWC 167

Query: 132 PLQGSFPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKKTIDFYFVLDSSSSSFHDKKH 191
           PLQGSFPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKKTIDFYFVLDSSSSSFHDKKH
Sbjct: 168 PLQGSFPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKKTIDFYFVLDSSSSSFHDKKH 227

Query: 192 WTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLSGTGQDTEGMEL 251
           WTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLSGTGQDTEGMEL
Sbjct: 228 WTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLSGTGQDTEGMEL 287

Query: 252 VTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGGGTAGSCQVQCS 311
           VTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGGGTAGSCQVQCS
Sbjct: 288 VTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGGGTAGSCQVQCS 347

Query: 312 YL 313
           YL
Sbjct: 348 YL 349


>gi|169167981 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 263

 Score =  264 bits (675), Expect = 7e-71
 Identities = 125/129 (96%), Positives = 126/129 (97%)

Query: 185 SFHDKKHWTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLSGTGQ 244
           +F   KHWTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLSGTGQ
Sbjct: 135 AFTGWKHWTLKATRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLSGTGQ 194

Query: 245 DTEGMELVTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGGGTAG 304
           DTEGMELVTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGGGTAG
Sbjct: 195 DTEGMELVTQIHAWVIDILFYRSRALLWRREASAEIQWYLTSVWWWRRSGTLGGGGGTAG 254

Query: 305 SCQVQCSYL 313
           SCQVQCSYL
Sbjct: 255 SCQVQCSYL 263


>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
          Length = 1374

 Score = 35.0 bits (79), Expect = 0.086
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 11/66 (16%)

Query: 36  WRSRVSIGSGAGP-----W--VEPAGLEEGCRLPMFMTRSRTKPHAPGERIHGTQ----E 84
           WRS VS  + +G      W  V   G  EGC  P    R+  +P  PGE + G Q    +
Sbjct: 678 WRSNVSANNNSGSRCPESWDPVSAGGHAEGCPSPKQTPRASPEPGYPGEPLLGLQAASAQ 737

Query: 85  TPSCSP 90
            P C P
Sbjct: 738 EPGCCP 743


>gi|5174547 mitogen-activated protein kinase kinase kinase 5 [Homo
           sapiens]
          Length = 1374

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 21/112 (18%), Positives = 47/112 (41%), Gaps = 12/112 (10%)

Query: 137 FPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKKTIDFYFVLDSSSSSFHDKKHWTLKA 196
           FP+L+   ++   +   + ++ NN+        +KTI  + VL       H+   W   A
Sbjct: 559 FPVLI---LEPTKIYQPSYLSINNEVE------EKTISIWHVLPDDKKGIHE---WNFSA 606

Query: 197 TRITSSNPTPYQAEKAKMMGERTLDQFTVYFISFIHLTKIYYLSGTGQDTEG 248
           + +   + + ++     +      D F +YF + +H  K + +  T  + +G
Sbjct: 607 SSVRGVSISKFEERCCFLYVLHNSDDFQIYFCTELHCKKFFEMVNTITEEKG 658


>gi|116734704 interferon regulatory factor 2 binding protein 2
           isoform A [Homo sapiens]
          Length = 587

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 9/82 (10%)

Query: 5   NIVNCNESVLKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGLEEGCRLPMF 64
           N  N +++V +   K  PS   E  +  P        I   A PW+  +   EG ++PM 
Sbjct: 342 NGANGSKAVARTARKRKPSPEPEGEVGPP-------KINGEAQPWLSTS--TEGLKIPMT 392

Query: 65  MTRSRTKPHAPGERIHGTQETP 86
            T S   P  P    H  + TP
Sbjct: 393 PTSSFVSPPPPTASPHSNRTTP 414


>gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo
           sapiens]
          Length = 3177

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 29/131 (22%), Positives = 44/131 (33%), Gaps = 26/131 (19%)

Query: 143 PLVQTLGLLLENIMNFNNQAMNSRASWKKTIDFYFVLDSSSSSFHDKKHWTLKATRITSS 202
           PLV    L L      + Q   +        D  F++DSS         WT+        
Sbjct: 8   PLVAVFCLFLSGFPTTHAQQQQADVKNGAAADIIFLVDSS---------WTIGEEHFQLV 58

Query: 203 NPTPYQAEKAKMMGERTLDQFTVYF-----ISFI------------HLTKIYYLSGTGQD 245
               Y   K+  +GE       V F       F+            H++ + Y+ GT Q 
Sbjct: 59  REFLYDVVKSLAVGENDFHFALVQFNGNPHTEFLLNTYRTKQEVLSHISNMSYIGGTNQT 118

Query: 246 TEGMELVTQIH 256
            +G+E + Q H
Sbjct: 119 GKGLEYIMQSH 129


>gi|21955174 kinesin family member C2 [Homo sapiens]
          Length = 838

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 18/62 (29%)

Query: 40  VSIGSGAGPWVEPAGLEEGCRLPMFMTRSRTKPHAP-------GERIHGTQETPSCSPTH 92
           + +G+GAG           CR P     +R +P AP       G RI G Q  PS SPT 
Sbjct: 705 LQVGAGAGQVC-------ACRSPP----TRARPPAPLARRSPRGRRISGRQSAPSSSPTE 753

Query: 93  LV 94
            V
Sbjct: 754 WV 755


>gi|126032338 ryanodine receptor 3 [Homo sapiens]
          Length = 4870

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 60   RLPMFMTRSRTKPHAPGERIHGTQETPSC 88
            RLP F+   +  PH    RI GT ++P C
Sbjct: 1240 RLPTFVNVPKDHPHIEVMRIDGTMDSPPC 1268


>gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens]
          Length = 349

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 15  KRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGL 55
           K W    PS   + A+   TR  SR+    G  P   PAGL
Sbjct: 65  KEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAGL 105


>gi|116734706 interferon regulatory factor 2 binding protein 2
           isoform B [Homo sapiens]
          Length = 571

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 9/75 (12%)

Query: 12  SVLKRWNKTYPSAFSEAAIEAPTRWRSRVSIGSGAGPWVEPAGLEEGCRLPMFMTRSRTK 71
           +V +   K  PS   E  +  P        I   A PW+  +   EG ++PM  T S   
Sbjct: 333 AVARTARKRKPSPEPEGEVGPP-------KINGEAQPWLSTS--TEGLKIPMTPTSSFVS 383

Query: 72  PHAPGERIHGTQETP 86
           P  P    H  + TP
Sbjct: 384 PPPPTASPHSNRTTP 398


>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
           sapiens]
          Length = 461

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 12/72 (16%)

Query: 62  PMFMTRSRTKPHAPGERIHGTQ---------ETPSCSPTHLVDSHVLLQL---WLLQKQK 109
           P+ + R    PH P ++  GTQ           PS S + L  S   L        Q Q 
Sbjct: 291 PLCLQREAKVPHLPADKARGTQGPEQQHLLITAPSSSSSSLESSASALDRRAPTRNQPQA 350

Query: 110 PAVDSGGAEELR 121
           P V++ GA E R
Sbjct: 351 PGVEASGAGEAR 362


>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
            [Homo sapiens]
          Length = 6907

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 130  WCPLQGSFPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKK 171
            W  ++ S P++L   ++TL   +EN+ +  ++A +S  SW+K
Sbjct: 5297 WYCMEHSKPVVLS--LETLRCQVENLQSLQDEAESSEGSWEK 5336


>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
            [Homo sapiens]
          Length = 6885

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 130  WCPLQGSFPLLLGPLVQTLGLLLENIMNFNNQAMNSRASWKK 171
            W  ++ S P++L   ++TL   +EN+ +  ++A +S  SW+K
Sbjct: 5297 WYCMEHSKPVVLS--LETLRCQVENLQSLQDEAESSEGSWEK 5336


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,924,963
Number of Sequences: 37866
Number of extensions: 594397
Number of successful extensions: 1461
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1453
Number of HSP's gapped (non-prelim): 17
length of query: 313
length of database: 18,247,518
effective HSP length: 102
effective length of query: 211
effective length of database: 14,385,186
effective search space: 3035274246
effective search space used: 3035274246
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.