Guide to the Human Genome
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Name: LOC100129094 Sequence: fasta or formatted (247aa) NCBI GI: 169162778
Description:

PREDICTED: hypothetical protein LOC100129094

Not currently referenced in the text

Other entries for this name:
alt mRNA {247aa} PREDICTED: similar to hCG2036765
alt mRNA {247aa} PREDICTED: similar to hCG2036765
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         24           2
 C cysteine            3.2          8           2
 D aspartate           4.0         10           1
 E glutamate           6.9         17           3
 F phenylalanine       4.0         10           1
 G glycine             6.9         17           2
 H histidine           2.4          6           1
 I isoleucine          2.8          7           1
 K lysine              4.0         10           1
 L leucine             7.3         18           2
 M methionine          3.2          8           1
 N asparagine          1.6          4           1
 P proline             3.6          9           1
 Q glutamine           5.3         13           2
 R arginine           10.1         25           2
 S serine              7.7         19           2
 T threonine           5.7         14           2
 V valine              7.3         18           1
 W tryptophan          2.8          7           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC100129094 
LOC100129094          1.000   PREDICTED: similar to hCG2036765 
LOC100129094          1.000   PREDICTED: similar to hCG2036765 
BTN2A1                0.278   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A1                0.278   butyrophilin, subfamily 2, member A1 isoform 2 precu...
BTN1A1                0.259   butyrophilin, subfamily 1, member A1 
BTN3A3                0.257   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.257   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN2A2                0.253   butyrophilin, subfamily 2, member A2 isoform a 
BTN3A1                0.243   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.243   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN3A1                0.243   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN3A2                0.241   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTNL9                 0.214   butyrophilin-like 9 
BTNL2                 0.183   butyrophilin-like 2 
BTNL3                 0.164   butyrophilin-like 3 
BTN3A1                0.160   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTNL8                 0.133   butyrophilin-like 8 isoform 2 precursor 
BTNL8                 0.129   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.129   butyrophilin-like 8 isoform 1 precursor 
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform beta4 pr...
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform alpha4 p...
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform beta5 pr...
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform beta2 pr...
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform alpha3 p...
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform beta3 pr...
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform beta1 pr...
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform alpha2 p...
MOG                   0.106   myelin oligodendrocyte glycoprotein isoform alpha1 p...
BTN2A2                0.095   butyrophilin, subfamily 2, member A2 isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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