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Search of human proteins with 169161809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169161809 PREDICTED: hypothetical protein [Homo sapiens]
(197 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169162301 PREDICTED: hypothetical protein [Homo sapiens] 412 e-115
gi|169161809 PREDICTED: hypothetical protein [Homo sapiens] 412 e-115
gi|169162579 PREDICTED: hypothetical protein [Homo sapiens] 412 e-115
gi|239744625 PREDICTED: hypothetical protein XP_002343208 [Homo ... 30 1.7
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 30 1.7
gi|239743666 PREDICTED: hypothetical protein XP_002342940 isofor... 29 3.0
gi|239743664 PREDICTED: hypothetical protein XP_002342939 isofor... 29 3.0
gi|167466201 WAS protein family homolog 1 [Homo sapiens] 29 3.0
gi|239754624 PREDICTED: similar to hCG1998564 [Homo sapiens] 28 3.9
gi|239754620 PREDICTED: hypothetical protein [Homo sapiens] 28 3.9
gi|62526031 neurochondrin isoform 2 [Homo sapiens] 28 3.9
gi|24307949 neurochondrin isoform 1 [Homo sapiens] 28 3.9
gi|62526029 neurochondrin isoform 1 [Homo sapiens] 28 3.9
gi|21536371 telomerase-associated protein 1 [Homo sapiens] 28 5.0
gi|169160748 PREDICTED: hypothetical protein [Homo sapiens] 28 5.0
gi|169161671 PREDICTED: hypothetical protein [Homo sapiens] 28 5.0
gi|242247193 SH2B adaptor protein 2 [Homo sapiens] 28 6.6
gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo s... 28 6.6
gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 28 6.6
gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 28 6.6
gi|148613878 acrosin precursor [Homo sapiens] 28 6.6
gi|239756362 PREDICTED: hypothetical protein [Homo sapiens] 27 8.6
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 27 8.6
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 27 8.6
>gi|169162301 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 412 bits (1058), Expect = e-115
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT 60
MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT
Sbjct: 1 MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT 60
Query: 61 LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL 120
LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL
Sbjct: 61 LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL 120
Query: 121 PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM 180
PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM
Sbjct: 121 PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM 180
Query: 181 GASAGRPACWSPSLQST 197
GASAGRPACWSPSLQST
Sbjct: 181 GASAGRPACWSPSLQST 197
>gi|169161809 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 412 bits (1058), Expect = e-115
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT 60
MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT
Sbjct: 1 MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT 60
Query: 61 LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL 120
LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL
Sbjct: 61 LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL 120
Query: 121 PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM 180
PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM
Sbjct: 121 PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM 180
Query: 181 GASAGRPACWSPSLQST 197
GASAGRPACWSPSLQST
Sbjct: 181 GASAGRPACWSPSLQST 197
>gi|169162579 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 412 bits (1058), Expect = e-115
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT 60
MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT
Sbjct: 1 MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAADHT 60
Query: 61 LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL 120
LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL
Sbjct: 61 LVMDKLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATL 120
Query: 121 PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM 180
PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM
Sbjct: 121 PQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGM 180
Query: 181 GASAGRPACWSPSLQST 197
GASAGRPACWSPSLQST
Sbjct: 181 GASAGRPACWSPSLQST 197
>gi|239744625 PREDICTED: hypothetical protein XP_002343208 [Homo
sapiens]
Length = 333
Score = 29.6 bits (65), Expect = 1.7
Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 16/120 (13%)
Query: 1 MPIPIANQKNRLVKVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYLTFLLTSAAD-- 58
+P P + K R+ + P + + A LS P VHTLPN +P L L A
Sbjct: 50 LPAPQGSGKTRVNEQLQQAWKPGRGINKLMALDLSGPHVHTLPNPSPVLLALQQFAGSLQ 109
Query: 59 -HTLVMDKLLSTVPPTQPPCPGHEVFASLI--------WSIWPLLE---SCQMRDISFTW 106
+ L + + T C H SL WS P L+ +C + SF W
Sbjct: 110 LYALAVGIFKGIL--TSLLCISHGYLKSLALLTKALDRWSAVPCLQGLYTCPLPWSSFPW 167
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 29.6 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 13/56 (23%)
Query: 124 QCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGG 179
Q PSPAHP L P L +V + + GS+ ++ P SSP++S G
Sbjct: 2 QSSPSPAHPQL-----PVLQTQMVSDGMTGSNPVS--------PASSSSPASSGAG 44
>gi|239743666 PREDICTED: hypothetical protein XP_002342940 isoform 2
[Homo sapiens]
Length = 465
Score = 28.9 bits (63), Expect = 3.0
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 43 PNTTPYLTFLLTSAADHTLV--MDKLLSTVPPTQPPCPGHEVFAS 85
P T P L T A+ V D +L+ PP PP P EV AS
Sbjct: 275 PGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLAS 319
>gi|239743664 PREDICTED: hypothetical protein XP_002342939 isoform 1
[Homo sapiens]
Length = 482
Score = 28.9 bits (63), Expect = 3.0
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 43 PNTTPYLTFLLTSAADHTLV--MDKLLSTVPPTQPPCPGHEVFAS 85
P T P L T A+ V D +L+ PP PP P EV AS
Sbjct: 292 PGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLAS 336
>gi|167466201 WAS protein family homolog 1 [Homo sapiens]
Length = 465
Score = 28.9 bits (63), Expect = 3.0
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 43 PNTTPYLTFLLTSAADHTLV--MDKLLSTVPPTQPPCPGHEVFAS 85
P T P L T A+ V D +L+ PP PP P EV AS
Sbjct: 275 PGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLAS 319
>gi|239754624 PREDICTED: similar to hCG1998564 [Homo sapiens]
Length = 526
Score = 28.5 bits (62), Expect = 3.9
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 12/57 (21%)
Query: 35 SHPLVHTLPNTTPYLTFLLTSAAD------------HTLVMDKLLSTVPPTQPPCPG 79
S+ + T P T P TF L +AA + L+ PP+ PPCPG
Sbjct: 422 SNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTNPLLESLKKMQTPPSLPPCPG 478
>gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 551
Score = 28.5 bits (62), Expect = 3.9
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 10/65 (15%)
Query: 65 KLLSTVPPTQPPCPGHEVFASLIWSIWPLLESCQMRDISFTWRRMGRSQHLTSATLPQNQ 124
+LL VP G E+FA L+ + R +F R R Q L S+ P
Sbjct: 159 RLLLWVPQQHGDHTGEELFAPLL----------RRRPPAFRLGRQSRQQPLESSHCPDLP 208
Query: 125 CHPSP 129
HPSP
Sbjct: 209 YHPSP 213
>gi|62526031 neurochondrin isoform 2 [Homo sapiens]
Length = 712
Score = 28.5 bits (62), Expect = 3.9
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 26 LARKSACFLSHPLVHTLPNTTPYLT------FLLTSAADHTLVMDKLLSTVPPTQPPCPG 79
L ++ ACF S L++TL + P L L + A L+M +LLST P Q
Sbjct: 518 LIKRDACFTS--LMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPAS 575
Query: 80 HEVFASLI 87
FA+ I
Sbjct: 576 RGFFAAAI 583
>gi|24307949 neurochondrin isoform 1 [Homo sapiens]
Length = 729
Score = 28.5 bits (62), Expect = 3.9
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 26 LARKSACFLSHPLVHTLPNTTPYLT------FLLTSAADHTLVMDKLLSTVPPTQPPCPG 79
L ++ ACF S L++TL + P L L + A L+M +LLST P Q
Sbjct: 535 LIKRDACFTS--LMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPAS 592
Query: 80 HEVFASLI 87
FA+ I
Sbjct: 593 RGFFAAAI 600
>gi|62526029 neurochondrin isoform 1 [Homo sapiens]
Length = 729
Score = 28.5 bits (62), Expect = 3.9
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 26 LARKSACFLSHPLVHTLPNTTPYLT------FLLTSAADHTLVMDKLLSTVPPTQPPCPG 79
L ++ ACF S L++TL + P L L + A L+M +LLST P Q
Sbjct: 535 LIKRDACFTS--LMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPAS 592
Query: 80 HEVFASLI 87
FA+ I
Sbjct: 593 RGFFAAAI 600
>gi|21536371 telomerase-associated protein 1 [Homo sapiens]
Length = 2627
Score = 28.1 bits (61), Expect = 5.0
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 74 QPPCPGHEVFASLIWS-IWPLLESCQMRDISFTWRRMG-RSQHLTSATLPQNQCHPSPAH 131
+P G E F L+ +W +++ ++ + + + L AT Q Q PSPA
Sbjct: 1086 RPYVGGLEEFGQLVLQDVWNMIQKLYLQPGALLEQPVSIPDDDLVQATFQQLQKPPSPAR 1145
Query: 132 PNLVSYIIPQLHQDLVEEELRGSSRLTCIL------KYAFCPVLISSPSTSAGGMGAS 183
P L+ QD V+ + RL+ + K AF L+S+ G AS
Sbjct: 1146 PRLL--------QDTVQRLMLPHGRLSLVTGQSGQGKTAFLASLVSALQAPDGAKVAS 1195
>gi|169160748 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 28.1 bits (61), Expect = 5.0
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 128 SPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGMGASAGRP 187
S AH + V I+P+LH+D + E + + Y ++++SP+ ++ GAS
Sbjct: 55 SMAHMSYVHRIVPRLHRDHIYEGIFQEPQKQ---DYFMSQLVVTSPAPASEKGGASKSST 111
Query: 188 AC 189
C
Sbjct: 112 IC 113
>gi|169161671 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 28.1 bits (61), Expect = 5.0
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 128 SPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGMGASAGRP 187
S AH + V I+P+LH+D + E + + Y ++++SP+ ++ GAS
Sbjct: 55 SMAHMSYVHRIVPRLHRDHIYEGIFQEPQKQ---DYFMSQLVVTSPAPASEKGGASKSST 111
Query: 188 AC 189
C
Sbjct: 112 IC 113
>gi|242247193 SH2B adaptor protein 2 [Homo sapiens]
Length = 675
Score = 27.7 bits (60), Expect = 6.6
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 105 TWRRMGRSQHLTSATLPQNQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYA 164
T+ G+++HL + QCH V ++ H + E GS+ +T + Y
Sbjct: 500 TFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVLDMLRHFHTHPIPLESGGSADIT-LRSY- 557
Query: 165 FCPVLISSPSTSAGGM-GASAGRPACWSPS 193
V P G A+ PACWS S
Sbjct: 558 ---VRAQDPPPEPGPTPPAAPASPACWSDS 584
>gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1662
Score = 27.7 bits (60), Expect = 6.6
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 123 NQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGMG 181
++C P PA LVS+ + + E+E R I P S P++ + G G
Sbjct: 460 SRCTPPPADSELVSFCYLHMREQRKEQESRTDVNENLIFFEETRPRTKSDPTSKSSGQG 518
>gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 27.7 bits (60), Expect = 6.6
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 123 NQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGMG 181
++C P PA LVS+ + + E+E R I P S P++ + G G
Sbjct: 547 SRCTPPPADSELVSFCYLHMREQRKEQESRTDVNENLIFFEETRPRTKSDPTSKSSGQG 605
>gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 27.7 bits (60), Expect = 6.6
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 123 NQCHPSPAHPNLVSYIIPQLHQDLVEEELRGSSRLTCILKYAFCPVLISSPSTSAGGMG 181
++C P PA LVS+ + + E+E R I P S P++ + G G
Sbjct: 547 SRCTPPPADSELVSFCYLHMREQRKEQESRTDVNENLIFFEETRPRTKSDPTSKSSGQG 605
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 27.7 bits (60), Expect = 6.6
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 45 TTPYLTFLLTSAADHTLVMDKLLSTVPPTQPPCP-----GHEVFASLIWSIWP 92
T PYL ++ + + L M + + PPT P P H + A L W P
Sbjct: 278 TWPYLNWIASKIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQP 330
>gi|239756362 PREDICTED: hypothetical protein [Homo sapiens]
Length = 111
Score = 27.3 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 150 ELRGSSRLTCILKYAFCPVLISSPSTSAGGMGASAGRPACW 190
ELRGSSR + + PV + + G GRPA W
Sbjct: 25 ELRGSSRAGRVCQRPLLPVSVGIFQKAEHGGQVKPGRPAQW 65
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 27.3 bits (59), Expect = 8.6
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 13/77 (16%)
Query: 14 KVPNFVSPPRGQLARKSACFLSHPLVHTLPNTTPYL-----TFLLTSAADHTLVMDKLLS 68
+VP PP A LS PL L P L + L T +A V + +
Sbjct: 1038 QVPTVPVPP--------AAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVPTQTAT 1089
Query: 69 TVPPTQPPCPGHEVFAS 85
+PP PP PG AS
Sbjct: 1090 LLPPANPPLPGGPGIAS 1106
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 27.3 bits (59), Expect = 8.6
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 12/56 (21%)
Query: 35 SHPLVHTLPNTTPYLTFLLTSAA------------DHTLVMDKLLSTVPPTQPPCP 78
S+ + T P T P TF L +AA + L+ PP+ PPCP
Sbjct: 294 SNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTNPLLESLKKMQTPPSLPPCP 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,292,990
Number of Sequences: 37866
Number of extensions: 446851
Number of successful extensions: 1312
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1299
Number of HSP's gapped (non-prelim): 26
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.