Guide to the Human Genome
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Name: PLAGL1 Sequence: fasta or formatted (411aa) NCBI GI: 37622890
Description:

pleiomorphic adenoma gene-like 1 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [463aa] pleiomorphic adenoma gene-like 1 isoform 2
alt prot [463aa] pleiomorphic adenoma gene-like 1 isoform 2
alt prot [463aa] pleiomorphic adenoma gene-like 1 isoform 2
alt prot [463aa] pleiomorphic adenoma gene-like 1 isoform 2
alt mRNA [411aa] pleiomorphic adenoma gene-like 1 isoform 1
alt mRNA [411aa] pleiomorphic adenoma gene-like 1 isoform 1
alt prot [463aa] pleiomorphic adenoma gene-like 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         33           3
 C cysteine            3.4         14           1
 D aspartate           3.4         14           1
 E glutamate           4.6         19           2
 F phenylalanine       4.1         17           1
 G glycine             6.3         26           1
 H histidine           6.3         26           2
 I isoleucine          1.2          5           1
 K lysine              6.6         27           2
 L leucine            13.4         55           2
 M methionine          1.5          6           1
 N asparagine          3.4         14           1
 P proline            10.5         43           4
 Q glutamine           5.6         23           4
 R arginine            2.7         11           2
 S serine              8.5         35           2
 T threonine           6.3         26           2
 V valine              2.7         11           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                1.000   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                1.000   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                1.000   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                1.000   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                1.000   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                1.000   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                1.000   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL2                0.341   pleiomorphic adenoma gene-like 2 
PLAG1                 0.327   pleiomorphic adenoma gene 1 isoform b 
PLAG1                 0.327   pleiomorphic adenoma gene 1 isoform a 
PLAG1                 0.327   pleiomorphic adenoma gene 1 isoform a 
ZNF510                0.089   zinc finger protein 510 
ZNF610                0.087   zinc finger protein 610 isoform b 
ZNF610                0.087   zinc finger protein 610 isoform a 
ZNF610                0.087   zinc finger protein 610 isoform a 
ZNF610                0.087   zinc finger protein 610 isoform a 
ZBTB24                0.087   zinc finger and BTB domain containing 24 
ZBTB17                0.086   zinc finger and BTB domain containing 17 
ZNF264                0.086   zinc finger protein 264 
ZNF582                0.086   zinc finger protein 582 
ZNF845                0.086   zinc finger protein 845 
ZNF98                 0.086   zinc finger protein 98 
ZNF333                0.086   zinc finger protein 333 
ZNF577                0.085   zinc finger protein 577 isoform b 
ZNF577                0.085   zinc finger protein 577 isoform a 
ZNF493                0.085   zinc finger protein 493 isoform 1 
ZNF493                0.085   zinc finger protein 493 isoform 3 
ZNF805                0.085   zinc finger protein 805 isoform 2 
ZNF805                0.085   zinc finger protein 805 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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