Search of human proteins with 167555123

Search of human proteins with 167555123

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|167555123 uroplakin-like protein [Homo sapiens]
         (263 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|167555123 uroplakin-like protein [Homo sapiens]                    525   e-149
gi|33149306 uroplakin 3B isoform b [Homo sapiens]                     142   4e-34
gi|13399330 uroplakin 3B isoform a [Homo sapiens]                      91   1e-18
gi|5902152 uroplakin 3A precursor [Homo sapiens]                       47   1e-05
gi|222831660 family with sequence similarity 171, member A2 [Hom...    36   0.030
gi|239750916 PREDICTED: similar to hCG1803335 [Homo sapiens]           33   0.25 
gi|71274107 melanoma cell adhesion molecule [Homo sapiens]             30   2.1  
gi|239753738 PREDICTED: hypothetical protein [Homo sapiens]            30   2.8  
gi|154800453 tastin isoform 1 [Homo sapiens]                           30   2.8  
gi|156104886 CC chemokine receptor 10 [Homo sapiens]                   29   3.7  
gi|54792098 erbB-2 isoform b [Homo sapiens]                            29   4.8  
gi|54792096 erbB-2 isoform a [Homo sapiens]                            29   4.8  
gi|239745314 PREDICTED: similar to hCG1803335 [Homo sapiens]           29   4.8  
gi|32880203 cadherin-like 24 isoform 2 [Homo sapiens]                  28   6.2  
gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens]                  28   6.2  
gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]                     28   8.2  
gi|63025206 hypothetical protein LOC221061 [Homo sapiens]              28   8.2  

>gi|167555123 uroplakin-like protein [Homo sapiens]
          Length = 263

 Score =  525 bits (1351), Expect = e-149
 Identities = 263/263 (100%), Positives = 263/263 (100%)

Query: 1   MDNSWRLGPAIGLSAGQSQLLVSLLLLLTRVQPGTDVAAPEHISYVPQLSNDTLAGRLTL 60
           MDNSWRLGPAIGLSAGQSQLLVSLLLLLTRVQPGTDVAAPEHISYVPQLSNDTLAGRLTL
Sbjct: 1   MDNSWRLGPAIGLSAGQSQLLVSLLLLLTRVQPGTDVAAPEHISYVPQLSNDTLAGRLTL 60

Query: 61  STFTLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTL 120
           STFTLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTL
Sbjct: 61  STFTLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTL 120

Query: 121 RANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYRVKFLVMNDEGPVAETKWS 180
           RANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYRVKFLVMNDEGPVAETKWS
Sbjct: 121 RANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYRVKFLVMNDEGPVAETKWS 180

Query: 181 SDTRLQQAQALRAVPGPQSPGTVVIIAILSILLAVLLTVLLAVLIYTCFNSCRSTSLSGP 240
           SDTRLQQAQALRAVPGPQSPGTVVIIAILSILLAVLLTVLLAVLIYTCFNSCRSTSLSGP
Sbjct: 181 SDTRLQQAQALRAVPGPQSPGTVVIIAILSILLAVLLTVLLAVLIYTCFNSCRSTSLSGP 240

Query: 241 EEAGSVRRYTTHLAFSTPAEGAS 263
           EEAGSVRRYTTHLAFSTPAEGAS
Sbjct: 241 EEAGSVRRYTTHLAFSTPAEGAS 263


>gi|33149306 uroplakin 3B isoform b [Homo sapiens]
          Length = 276

 Score =  142 bits (357), Expect = 4e-34
 Identities = 110/272 (40%), Positives = 143/272 (52%), Gaps = 32/272 (11%)

Query: 11  IGLSAGQSQL-LVSLLLLLTRVQPGTDVAAPEHISYVPQLSNDTLAGRLTLSTFTLEQPL 69
           +GL  GQ  L L  LLL L  ++P   +   E + Y PQ++   L G++T +TF+LEQP 
Sbjct: 1   MGLPWGQPHLGLQMLLLALNCLRPSLSL---ELVPYTPQITAWDLEGKVTATTFSLEQPR 57

Query: 70  GQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTLRANRVLYQT 129
             F     S  DT+WLVVA SNA++ F  P T  DIPA       G+Y+TL  +      
Sbjct: 58  CVFDGL-ASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLSPDQLPC 116

Query: 130 ------RGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYRVKFLVMNDEG-PVAETKWSSD 182
                  G   VLRVG+D  C      CN PLPGPGPYRVKFL+M+  G P AETKWS  
Sbjct: 117 GDPMAGSGGAPVLRVGHDHGCHQQPF-CNAPLPGPGPYRVKFLLMDTRGSPRAETKWSDP 175

Query: 183 TRLQQAQALRAV---PGPQSPGTVVIIAILSILLAVLLTVLLAVLIYTCFNSCRSTSLSG 239
             L Q +   ++   PG +S   +VI +ILS L  +LL   LA       ++ R +SL  
Sbjct: 176 ITLHQGKTPGSIDTWPGRRSGSMIVITSILSSLAGLLLLAFLAA------STMRFSSLWW 229

Query: 240 PEEA------GSV--RRYTTHLAFSTPAEGAS 263
           PEEA      GS   +RY TH     P+E A+
Sbjct: 230 PEEAPEQLRIGSFMGKRYMTH--HIPPSEAAT 259


>gi|13399330 uroplakin 3B isoform a [Homo sapiens]
          Length = 320

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 65/165 (39%), Positives = 84/165 (50%), Gaps = 16/165 (9%)

Query: 5   WRLGPA-IGLSAGQSQLLVSLLLLLTRVQPGTDVAAPEHISYVPQLSNDTLAGRLTLSTF 63
           W   P  +G +A  +   VS+  LL+ V       A E + Y PQ++   L G++T +TF
Sbjct: 54  WAPAPLRLGEAAPGTPTPVSVAHLLSPV-------ATELVPYTPQITAWDLEGKVTATTF 106

Query: 64  TLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTLRAN 123
           +LEQP   F     S  DT+WLVVA SNA++ F  P T  DIPA       G+Y+TL  +
Sbjct: 107 SLEQPRCVFDGL-ASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYMTLPLS 165

Query: 124 RVLYQT------RGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYR 162
                        G   VLRVG+D  C      CN PLPGPGPYR
Sbjct: 166 PDQLPCGDPMAGSGGAPVLRVGHDHGCHQQPF-CNAPLPGPGPYR 209


>gi|5902152 uroplakin 3A precursor [Homo sapiens]
          Length = 287

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 30/205 (14%)

Query: 43  ISYVPQLSNDTLA-GRLTLSTFTLEQPLGQFSSHN-ISDLDTIWLVVALSNATQSFTAPR 100
           ++  PQL++ T A    TL+T  LE+PL  F S   ++    ++L V + +A     + +
Sbjct: 19  VNLQPQLASVTFATNNPTLTTVALEKPLCMFDSKEALTGTHEVYLYVLVDSAISRNASVQ 78

Query: 101 TNQDIPAPANFSQR-----GYYLTLRANRVLYQTRGQL---------------HVLRVGN 140
            + + P  + F Q      G Y  +  + +       L               +++RVG 
Sbjct: 79  DSTNTPLGSTFLQTEGGRTGPYKAVAFDLIPCSDLPSLDAIGDVSKASQILNAYLVRVGA 138

Query: 141 DTHC--QPTKIG-CNHPLPGPGPYRVKFLVMNDEGPVAE--TKWSSDTRLQQAQALRAV- 194
           +  C   P   G CN PL     YR K++++N    + E  T WS   R  Q      + 
Sbjct: 139 NGTCLWDPNFQGLCNAPLSAATEYRFKYVLVNMSTGLVEDQTLWSDPIRTNQLTPYSTID 198

Query: 195 --PGPQSPGTVVIIAILSILLAVLL 217
             PG +S G +VI +IL  L   LL
Sbjct: 199 TWPGRRSGGMIVITSILGSLPFFLL 223


>gi|222831660 family with sequence similarity 171, member A2 [Homo
           sapiens]
          Length = 826

 Score = 36.2 bits (82), Expect = 0.030
 Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 13/97 (13%)

Query: 179 WSSDTRLQQAQALRAVPGPQSPGTVVIIAILSIL--LAVLLTVLLAVLIYTCFNSC---- 232
           W +      A  +    G Q  GT   I +L+IL  LA+L+ +LL +LIY C   C    
Sbjct: 289 WVAAMASPTAGLVTITSGIQDIGTYHTIFLLTILAALALLVLILLCLLIYYCRRRCLKPR 348

Query: 233 ---RSTSLSGPEEAGSVRRYTT----HLAFSTPAEGA 262
              R   LSGP +     + T+    HL    P E A
Sbjct: 349 QQHRKLQLSGPSDGNKRDQATSMSQLHLICGGPLEPA 385


>gi|239750916 PREDICTED: similar to hCG1803335 [Homo sapiens]
          Length = 246

 Score = 33.1 bits (74), Expect = 0.25
 Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 18/168 (10%)

Query: 47  PQL-SNDTLAGRLTLSTFTLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDI 105
           PQ+ ++D+L  R   +T ++  P  Q   H +S   T  +    S       + R  + +
Sbjct: 31  PQIKAHDSLHQRSARATESVPGPQSQCQGHRVSSRATESVPGPQSQFQGHRVSARATESV 90

Query: 106 PAPANFSQRGYYLTLRANRVLYQTRGQLHVLRV---------GNDTHCQPTKIGCN--HP 154
           P P +  Q G+ ++ RA   +   + Q    RV         G  + CQ  ++       
Sbjct: 91  PGPQSQCQ-GHRVSSRATESVPGPQSQRQGHRVSARATESAPGPQSQCQGHRVSARATES 149

Query: 155 LPGPGPYRVKFLVMN---DEGPVAETKWSSDTRLQQAQALRAVPGPQS 199
           +PGP   R    V +   +  P  ++++        A+A  +VPGPQS
Sbjct: 150 VPGPQSQRQGHRVSSRATESAPGPQSQFQGHR--VSARATESVPGPQS 195


>gi|71274107 melanoma cell adhesion molecule [Homo sapiens]
          Length = 646

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 180 SSDTRLQQAQALRAVPGPQSPGTVVIIAILSILLAVLLTVLLAVLIYTCFNSCRSTSLSG 239
           S  TR       R +P P+S G V++  I+ IL+  +L  +L  L       CR    SG
Sbjct: 538 SPHTRANSTSTERKLPEPESRGVVIVAVIVCILVLAVLGAVLYFLYKKGKLPCRR---SG 594

Query: 240 PEE 242
            +E
Sbjct: 595 KQE 597


>gi|239753738 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 293

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 189 QALRAVPGPQSPGTVVIIAILSILLAVLLTVLLAVLIYTCFNSCRSTSLSGPEEAGSVRR 248
           +A+  +PG +SP  V   A+ S+    L  +     I +C N C ++   GPE++  +  
Sbjct: 191 EAIACLPGLRSPLQVGTEAV-SVHFHPLFALKSRKSIPSCLNMCPASENRGPEKSSGIPE 249

Query: 249 YTTH 252
            T H
Sbjct: 250 STRH 253


>gi|154800453 tastin isoform 1 [Homo sapiens]
          Length = 778

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 10/112 (8%)

Query: 95  SFTAPRTNQDIPAPANFSQRGYYLTLR-ANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNH 153
           +F+ P+  +++      S  G   +L  A RV  +   ++   R  +D+H  P+      
Sbjct: 257 AFSLPKGEREV---VTHSDEGGVASLGLAQRVPLRENREMSHTRDSHDSHLMPSPAPVAQ 313

Query: 154 PLPG-----PGPYRVKFLVMNDEGPVAETKWSSDTRLQQAQALRAVPGPQSP 200
           PLPG     P P+  +   +   GP   T +S   RL      R  P P +P
Sbjct: 314 PLPGHVVPCPSPFG-RAQRVPSPGPPTLTSYSVLRRLTVQPKTRFTPMPSTP 364


>gi|156104886 CC chemokine receptor 10 [Homo sapiens]
          Length = 362

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/40 (35%), Positives = 26/40 (65%)

Query: 180 SSDTRLQQAQALRAVPGPQSPGTVVIIAILSILLAVLLTV 219
           S+D  +  A+AL A P P +PG   +++++  LL++LL +
Sbjct: 135 SADRYVAIARALPAGPRPSTPGRAHLVSVIVWLLSLLLAL 174


>gi|54792098 erbB-2 isoform b [Homo sapiens]
          Length = 1225

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 29/82 (35%)

Query: 144 CQPTKIGCNHPLPGPGPYRVKFLVMNDEGPVAETKWSSDTRLQQAQALRAVPGPQSPGTV 203
           CQP  I C H            + ++D+G  AE +                    SP T 
Sbjct: 593 CQPCPINCTHSC----------VDLDDKGCPAEQR-------------------ASPLTS 623

Query: 204 VIIAILSILLAVLLTVLLAVLI 225
           +I A++ ILL V+L V+  +LI
Sbjct: 624 IISAVVGILLVVVLGVVFGILI 645


>gi|54792096 erbB-2 isoform a [Homo sapiens]
          Length = 1255

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 29/82 (35%)

Query: 144 CQPTKIGCNHPLPGPGPYRVKFLVMNDEGPVAETKWSSDTRLQQAQALRAVPGPQSPGTV 203
           CQP  I C H            + ++D+G  AE +                    SP T 
Sbjct: 623 CQPCPINCTHSC----------VDLDDKGCPAEQR-------------------ASPLTS 653

Query: 204 VIIAILSILLAVLLTVLLAVLI 225
           +I A++ ILL V+L V+  +LI
Sbjct: 654 IISAVVGILLVVVLGVVFGILI 675


>gi|239745314 PREDICTED: similar to hCG1803335 [Homo sapiens]
          Length = 238

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 18/168 (10%)

Query: 47  PQL-SNDTLAGRLTLSTFTLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDI 105
           PQ+ ++D+L  R   +T ++  P  Q   H +S   T  +    S       + R  + +
Sbjct: 31  PQIKAHDSLHQRSARATESVPGPQSQCQGHRVSSRATESVPGPQSQFQGHRVSARATESV 90

Query: 106 PAPANFSQRGYYLTLRANRVLYQTRGQLHVLRV---------GNDTHCQPTKIGCN--HP 154
           P P +  Q G+ ++ RA   +   + Q    RV         G  +  Q  ++       
Sbjct: 91  PGPQSQCQ-GHRVSSRATESVPGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARATES 149

Query: 155 LPGPGPYRVKFLVMN---DEGPVAETKWSSDTRLQQAQALRAVPGPQS 199
           +PGP   R    V +   +  P  ++++        A+A  +VPGPQS
Sbjct: 150 VPGPQSQRQGHRVSSRATESAPGPQSQFQGHR--VSARATESVPGPQS 195


>gi|32880203 cadherin-like 24 isoform 2 [Homo sapiens]
          Length = 781

 Score = 28.5 bits (62), Expect = 6.2
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 103 QDIPAPANFSQRGYYLTLRANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYR 162
           QD P P  F+Q  Y+LT+  N+      GQ+    +  D+   P +      LP   P R
Sbjct: 366 QDAPEPPAFTQAAYHLTVPENKAPGTLVGQISAADL--DSPASPIRYSI---LPHSDPER 420

Query: 163 VKFLVMNDEGPV 174
             F +  +EG +
Sbjct: 421 C-FSIQPEEGTI 431


>gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens]
          Length = 819

 Score = 28.5 bits (62), Expect = 6.2
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 103 QDIPAPANFSQRGYYLTLRANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYR 162
           QD P P  F+Q  Y+LT+  N+      GQ+    +  D+   P +      LP   P R
Sbjct: 366 QDAPEPPAFTQAAYHLTVPENKAPGTLVGQISAADL--DSPASPIRYSI---LPHSDPER 420

Query: 163 VKFLVMNDEGPV 174
             F +  +EG +
Sbjct: 421 C-FSIQPEEGTI 431


>gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]
          Length = 1503

 Score = 28.1 bits (61), Expect = 8.2
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)

Query: 155 LPGPGPYRVKFLVMNDEGPVAETKWSSDTRLQQAQALRAVPGPQSPGTVVIIAILSILLA 214
           +PGP   R + L++     +A +  ++   L Q  A  A P  +   + VI+ + S+   
Sbjct: 1   MPGPPALRRRLLLLLLVLLIAGSAGAAP--LPQTGAGEAPPAAEVSSSFVILCVCSL--- 55

Query: 215 VLLTVLLAVLIYTCFNSCRSTSLSGPEEAGSVRRYTTHLAFSTPAE 260
               ++L VLI  C + C+   +   E   +   +   + F+ PAE
Sbjct: 56  ----IILIVLIANCVSCCKDPEIDFKEFEDN---FDDEIDFTPPAE 94


>gi|63025206 hypothetical protein LOC221061 [Homo sapiens]
          Length = 890

 Score = 28.1 bits (61), Expect = 8.2
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)

Query: 194 VPGP---QSPGTVVIIAILSIL--LAVLLTVLLAVLIYTCFNSC 232
           +PGP   Q   T   + +L+IL  +A +L VLL +L+Y C   C
Sbjct: 289 IPGPVVTQDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRKC 332


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,033,968
Number of Sequences: 37866
Number of extensions: 493985
Number of successful extensions: 1207
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1189
Number of HSP's gapped (non-prelim): 26
length of query: 263
length of database: 18,247,518
effective HSP length: 100
effective length of query: 163
effective length of database: 14,460,918
effective search space: 2357129634
effective search space used: 2357129634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.