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Search of human proteins with 167466286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|167466286 limb expression 1 [Homo sapiens]
(282 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|167466286 limb expression 1 [Homo sapiens] 562 e-160
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 296 1e-80
gi|239754054 PREDICTED: ankyrin repeat domain 31 [Homo sapiens] 32 0.63
gi|239748581 PREDICTED: ankyrin repeat domain 31 [Homo sapiens] 32 0.63
gi|239742600 PREDICTED: ankyrin repeat domain 31 [Homo sapiens] 32 0.63
gi|50658069 phosphodiesterase 4D interacting protein isoform 2 [... 31 1.4
gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [... 31 1.4
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ... 31 1.4
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 31 1.4
gi|157502201 ATP-binding cassette, sub-family C, member 4 isofor... 30 1.8
gi|169217489 PREDICTED: similar to phosphodiesterase 4D interact... 30 3.1
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa... 30 3.1
gi|156104862 ankyrin repeat domain 38 [Homo sapiens] 29 5.3
gi|148746195 trichohyalin [Homo sapiens] 28 6.9
gi|119120894 Dmx-like 2 [Homo sapiens] 28 6.9
gi|164565368 TBC1 domain family, member 14 isoform a [Homo sapiens] 28 6.9
gi|164565366 TBC1 domain family, member 14 isoform a [Homo sapiens] 28 6.9
gi|21264320 NLR family, pyrin domain containing 6 [Homo sapiens] 28 6.9
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 28 9.0
gi|21735548 centrosomal protein 2 [Homo sapiens] 28 9.0
gi|46255026 potassium channel tetramerisation domain containing ... 28 9.0
>gi|167466286 limb expression 1 [Homo sapiens]
Length = 282
Score = 562 bits (1449), Expect = e-160
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 1 MDRTLESLRHIIAQVLPHRDPALVFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLP 60
MDRTLESLRHIIAQVLPHRDPALVFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLP
Sbjct: 1 MDRTLESLRHIIAQVLPHRDPALVFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLP 60
Query: 61 APGPPFVSYVTLPGGSCFGNFQCCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMES 120
APGPPFVSYVTLPGGSCFGNFQCCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMES
Sbjct: 61 APGPPFVSYVTLPGGSCFGNFQCCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMES 120
Query: 121 VQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALR 180
VQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALR
Sbjct: 121 VQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALR 180
Query: 181 ETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARKAGQ 240
ETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARKAGQ
Sbjct: 181 ETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARKAGQ 240
Query: 241 ELRFYKEKKEILSLALTQICSDPDTSSPSDDQLSLTALCGYH 282
ELRFYKEKKEILSLALTQICSDPDTSSPSDDQLSLTALCGYH
Sbjct: 241 ELRFYKEKKEILSLALTQICSDPDTSSPSDDQLSLTALCGYH 282
>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
Length = 337
Score = 296 bits (759), Expect = 1e-80
Identities = 142/232 (61%), Positives = 187/232 (80%)
Query: 28 LNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQCCLSR 87
+NVV LQEFW+ KQ + A + +VVYE +P+ PP+V YVTLPGGSCFG+FQ C ++
Sbjct: 98 VNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTK 157
Query: 88 AEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHY 147
AEARR AAK+AL+NS+FNE PSRRIT EFI +SV EA+AS +G ++AD+P+T +GA+ +
Sbjct: 158 AEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRF 217
Query: 148 MLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMA 207
MLESN GK+MLEFQELMT+FQLLHWNGSLKA+RE +CSRQEV+++YS +LD+ +R MA
Sbjct: 218 MLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMA 277
Query: 208 LDWIMKERDSPGIVSQELRMALRQLEEARKAGQELRFYKEKKEILSLALTQI 259
LDW+ +E+ PG +S+EL R+L+EAR AG+ELRF+KEKK+IL LA Q+
Sbjct: 278 LDWVSREQSVPGALSRELASTERELDEARLAGKELRFHKEKKDILVLAAGQL 329
>gi|239754054 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]
Length = 1873
Score = 32.0 bits (71), Expect = 0.63
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 133 DDADDPSTSV-------------GAYHYMLESNM-GKTMLEFQELMTIFQLLHWNGSLKA 178
DD DD STS G HY + N+ K + FQ+ + L LKA
Sbjct: 901 DDDDDCSTSEKAITSKKVLCSTGGKKHYNFKENLTNKKEMGFQQFLLSEDHLSQENELKA 960
Query: 179 LRETKCSRQEVI--SYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQL--EE 234
+ T QE + SY + E + ++ + S G Q +R L E
Sbjct: 961 VSLTTLPEQEAVNFSYSDNAVISEHVANYEQCIFGPSFDHSNGNPEQNSLACMRTLLTHE 1020
Query: 235 ARKAGQELRFYKEKKEILSLALTQICSDPDT 265
A K + +K+ ++ + A T + + DT
Sbjct: 1021 ASKLTNHVELFKKPQDYIPRAPTFLMNQTDT 1051
>gi|239748581 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]
Length = 1873
Score = 32.0 bits (71), Expect = 0.63
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 133 DDADDPSTSV-------------GAYHYMLESNM-GKTMLEFQELMTIFQLLHWNGSLKA 178
DD DD STS G HY + N+ K + FQ+ + L LKA
Sbjct: 901 DDDDDCSTSEKAITSKKVLCSTGGKKHYNFKENLTNKKEMGFQQFLLSEDHLSQENELKA 960
Query: 179 LRETKCSRQEVI--SYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQL--EE 234
+ T QE + SY + E + ++ + S G Q +R L E
Sbjct: 961 VSLTTLPEQEAVNFSYSDNAVISEHVANYEQCIFGPSFDHSNGNPEQNSLACMRTLLTHE 1020
Query: 235 ARKAGQELRFYKEKKEILSLALTQICSDPDT 265
A K + +K+ ++ + A T + + DT
Sbjct: 1021 ASKLTNHVELFKKPQDYIPRAPTFLMNQTDT 1051
>gi|239742600 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]
Length = 1873
Score = 32.0 bits (71), Expect = 0.63
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 133 DDADDPSTSV-------------GAYHYMLESNM-GKTMLEFQELMTIFQLLHWNGSLKA 178
DD DD STS G HY + N+ K + FQ+ + L LKA
Sbjct: 901 DDDDDCSTSEKAITSKKVLCSTGGKKHYNFKENLTNKKEMGFQQFLLSEDHLSQENELKA 960
Query: 179 LRETKCSRQEVI--SYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQL--EE 234
+ T QE + SY + E + ++ + S G Q +R L E
Sbjct: 961 VSLTTLPEQEAVNFSYSDNAVISEHVANYEQCIFGPSFDHSNGNPEQNSLACMRTLLTHE 1020
Query: 235 ARKAGQELRFYKEKKEILSLALTQICSDPDT 265
A K + +K+ ++ + A T + + DT
Sbjct: 1021 ASKLTNHVELFKKPQDYIPRAPTFLMNQTDT 1051
>gi|50658069 phosphodiesterase 4D interacting protein isoform 2
[Homo sapiens]
Length = 969
Score = 30.8 bits (68), Expect = 1.4
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 96 KVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGK 155
K + +E S KE + ++ AV L+ D +S A +ES +
Sbjct: 484 KAVALERAIDEKFSALEEKEKELRQLRLAVRERDHDLERLRDVLSSNEATMQSMESLLRA 543
Query: 156 TMLEFQELMTIFQLLHWNGSLKALRETKCSR----QEVISYYSQYSLDEKMRSHMALDWI 211
LE ++L T Q L W LK ETK SR QE I Q SL ++ + L
Sbjct: 544 KGLEVEQLSTTCQNLQW---LKEEMETKFSRWQKEQESIIQQLQTSLHDRNKEVEDLSAT 600
Query: 212 MKERDSPG--IVSQELRMALRQLE 233
+ + PG +++EL L++ E
Sbjct: 601 LLCKLGPGQSEIAEELCQRLQRKE 624
>gi|50658071 phosphodiesterase 4D interacting protein isoform 5
[Homo sapiens]
Length = 1132
Score = 30.8 bits (68), Expect = 1.4
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 96 KVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGK 155
K + +E S KE + ++ AV L+ D +S A +ES +
Sbjct: 647 KAVALERAIDEKFSALEEKEKELRQLRLAVRERDHDLERLRDVLSSNEATMQSMESLLRA 706
Query: 156 TMLEFQELMTIFQLLHWNGSLKALRETKCSR----QEVISYYSQYSLDEKMRSHMALDWI 211
LE ++L T Q L W LK ETK SR QE I Q SL ++ + L
Sbjct: 707 KGLEVEQLSTTCQNLQW---LKEEMETKFSRWQKEQESIIQQLQTSLHDRNKEVEDLSAT 763
Query: 212 MKERDSPG--IVSQELRMALRQLE 233
+ + PG +++EL L++ E
Sbjct: 764 LLCKLGPGQSEIAEELCQRLQRKE 787
>gi|157311604 phosphodiesterase 4D interacting protein isoform 1
[Homo sapiens]
Length = 2346
Score = 30.8 bits (68), Expect = 1.4
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 96 KVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGK 155
K + +E S KE + ++ AV L+ D +S A +ES +
Sbjct: 484 KAVALERAIDEKFSALEEKEKELRQLRLAVRERDHDLERLRDVLSSNEATMQSMESLLRA 543
Query: 156 TMLEFQELMTIFQLLHWNGSLKALRETKCSR----QEVISYYSQYSLDEKMRSHMALDWI 211
LE ++L T Q L W LK ETK SR QE I Q SL ++ + L
Sbjct: 544 KGLEVEQLSTTCQNLQW---LKEEMETKFSRWQKEQESIIQQLQTSLHDRNKEVEDLSAT 600
Query: 212 MKERDSPG--IVSQELRMALRQLE 233
+ + PG +++EL L++ E
Sbjct: 601 LLCKLGPGQSEIAEELCQRLQRKE 624
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 30.8 bits (68), Expect = 1.4
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 16/89 (17%)
Query: 173 NGSLKALRETKCSRQEVISYYSQY--SLDEKMRSHMALDWIMKERDSPGIVSQELRMALR 230
N LR+ + R+E + ++Q L E+ R + K+RDS ++ELR LR
Sbjct: 1111 NALTSELRDLRAQREEAAAAHAQEVRRLQEQARD------LGKQRDSCLREAEELRTQLR 1164
Query: 231 QLEEAR--------KAGQELRFYKEKKEI 251
LE+AR +A ++LR +E +E+
Sbjct: 1165 LLEDARDGLRRELLEAQRKLRESQEGREV 1193
>gi|157502201 ATP-binding cassette, sub-family C, member 4 isoform 1
[Homo sapiens]
Length = 1325
Score = 30.4 bits (67), Expect = 1.8
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 14/73 (19%)
Query: 38 WESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQCCLSRAE------AR 91
WE +++ A+P EGV+++++ V+++ PGG L +++ R
Sbjct: 1025 WEYQKRPPPAWPHEGVIIFDN--------VNFMYSPGGPLVLKHLTALIKSQEKVGIVGR 1076
Query: 92 RDAAKVALINSLF 104
A K +LI++LF
Sbjct: 1077 TGAGKSSLISALF 1089
>gi|169217489 PREDICTED: similar to phosphodiesterase 4D interacting
protein [Homo sapiens]
Length = 211
Score = 29.6 bits (65), Expect = 3.1
Identities = 39/141 (27%), Positives = 55/141 (39%), Gaps = 23/141 (16%)
Query: 96 KVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGK 155
K + +E S KE + ++ AV L+ D +S A +ES +
Sbjct: 88 KAVALERAIDEKFSALEEKEKELRQLRLAVRERDHDLERLRDVLSSNEATMQTMESLLRA 147
Query: 156 TMLEFQELMTIFQLLHWNGSLKALRETKCSR----QEVISYYSQYSLDEKMRSHMALDWI 211
LE ++L T Q L W LK ETK SR QE I Q SL ++ +
Sbjct: 148 KGLEVEQLSTTCQNLQW---LKEEMETKFSRWQKEQESIIQQLQTSLHDRNKE------- 197
Query: 212 MKERDSPGIVSQELRMALRQL 232
V L++ LRQL
Sbjct: 198 ---------VEARLQLTLRQL 209
>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
sapiens]
Length = 1819
Score = 29.6 bits (65), Expect = 3.1
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 176 LKALRET--KCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMAL---R 230
LK+L E + +RQ ++ +YS+ S + R AL I + R + S LR L +
Sbjct: 745 LKSLEEELERKARQALVDHYSKLSAEAARREQKALWRIQRHR----LESARLRFLLEDEK 800
Query: 231 QLEEARKAGQELRFYKEKKEILSLALTQICSDPDTSSPSDDQ 272
++E KA E +E ++L Q+ S P P Q
Sbjct: 801 HIQEMLKAVSEAHQPQEPPDVLLSVHPQVTS-PGPEHPEGGQ 841
>gi|156104862 ankyrin repeat domain 38 [Homo sapiens]
Length = 995
Score = 28.9 bits (63), Expect = 5.3
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 44 QKAAFPSEGVV-VYESLPAPGPPF 66
Q+ A P EGVV V LP PGPPF
Sbjct: 229 QEGAEPPEGVVKVPNHLPLPGPPF 252
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 28.5 bits (62), Expect = 6.9
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 180 RETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARKAG 239
RE K +E + + L E+ +W + R + QE LR+ E R+
Sbjct: 986 REKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDEL-QQEEEQLLREEREKRRLQ 1044
Query: 240 QELRFYKEKKEI 251
+ R Y+E++E+
Sbjct: 1045 ERERQYREEEEL 1056
>gi|119120894 Dmx-like 2 [Homo sapiens]
Length = 3036
Score = 28.5 bits (62), Expect = 6.9
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 167 FQLLHW-NGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKER--DSPGIVSQ 223
FQL +W + AL E C+ + VI YS K S + D + +E D P I S
Sbjct: 2071 FQLYNWLEKEIAALHEI-CNHESVIKEYS-----SKTYSKVESDLLDQEEMVDKPDIGSY 2124
Query: 224 EL-RMALRQLEEARKAGQELRFYKEKKEILSLALTQICS 261
E ++ R+L+ R+ + + + +K + L CS
Sbjct: 2125 ERHQIERRRLQAKREHAERRKSWLQKNQDLLRVFLSYCS 2163
>gi|164565368 TBC1 domain family, member 14 isoform a [Homo sapiens]
Length = 693
Score = 28.5 bits (62), Expect = 6.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 86 SRAEARRDAAKVALINSLFNELPSR-RITKEFIMESVQEAVASTSGTLDDADDP 138
S+A R D V ++SL EL + ++ E I++ V + +S TL++ DDP
Sbjct: 145 SKALTRSDDVSVCSVSSLGTELSTTLSVSNEDILDLVVTSSSSAIVTLENDDDP 198
>gi|164565366 TBC1 domain family, member 14 isoform a [Homo sapiens]
Length = 693
Score = 28.5 bits (62), Expect = 6.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 86 SRAEARRDAAKVALINSLFNELPSR-RITKEFIMESVQEAVASTSGTLDDADDP 138
S+A R D V ++SL EL + ++ E I++ V + +S TL++ DDP
Sbjct: 145 SKALTRSDDVSVCSVSSLGTELSTTLSVSNEDILDLVVTSSSSAIVTLENDDDP 198
>gi|21264320 NLR family, pyrin domain containing 6 [Homo sapiens]
Length = 892
Score = 28.5 bits (62), Expect = 6.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 106 ELPS---RRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESN 152
ELP +T +FI +S QE +A+ S L+D P T+ G +L +
Sbjct: 484 ELPGVLETEVTYQFIDQSFQEFLAALSYLLEDGGVPRTAAGGVGTLLRGD 533
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 28.1 bits (61), Expect = 9.0
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 223 QELRMALRQLEEARKA-GQELRFYKEKKEILSLALTQICSDPDTSSPSDDQL 273
+EL+ ++ EEARKA +ELR +E + +L L + +T + ++++
Sbjct: 692 EELQKKKKEEEEARKATEEELRLEEENRRLLELMKVKAKEAEETDNEDEEEI 743
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 28.1 bits (61), Expect = 9.0
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 178 ALRETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARK 237
+L ET Q+ ++ SQ E++R M + + KE+++ GI+ +L+ A R+L+EA +
Sbjct: 929 SLLETLLQTQKELADASQQL--ERLRQDMKVQKL-KEQETTGILQTQLQEAQRELKEAAR 985
>gi|46255026 potassium channel tetramerisation domain containing 3
[Homo sapiens]
Length = 815
Score = 28.1 bits (61), Expect = 9.0
Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Query: 113 TKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHW 172
T+E +++ + + STS P+TSV + ++ ESN + L+ Q T + +
Sbjct: 588 TEEELLKLLDQCDLSTSRCATPNISPATSVVQHSHLRESN---SSLQLQHHDTTHEAATY 644
Query: 173 NGSLKALRETK-CSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQ 231
GS++ RE+ +R + Y + + + ++ + E + G + E++ A +
Sbjct: 645 -GSMRPYRESPLLARARRTESFHSYRDFQTINLNRNVERAVPENGNLGPIQAEVKGATGE 703
Query: 232 --LEEARKAGQELRFYKE 247
+ E + G E++ +E
Sbjct: 704 CNISERKSPGVEIKSLRE 721
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,674,839
Number of Sequences: 37866
Number of extensions: 456375
Number of successful extensions: 1559
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1538
Number of HSP's gapped (non-prelim): 40
length of query: 282
length of database: 18,247,518
effective HSP length: 101
effective length of query: 181
effective length of database: 14,423,052
effective search space: 2610572412
effective search space used: 2610572412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.