Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 167466219

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|167466219 dpy-19-like 4 [Homo sapiens]
         (723 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|167466219 dpy-19-like 4 [Homo sapiens]                            1456   0.0  
gi|46409292 dpy-19-like 3 [Homo sapiens]                              598   e-171
gi|93277105 dpy-19-like 2 [Homo sapiens]                              226   7e-59
gi|148839335 dpy-19-like 1 [Homo sapiens]                             213   5e-55
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s...    33   1.2  
gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo s...    33   1.2  
gi|4758762 asparaginyl-tRNA synthetase [Homo sapiens]                  33   1.2  
gi|52317223 olfactory receptor, family 2, subfamily T, member 5 ...    32   2.7  
gi|52317217 olfactory receptor, family 2, subfamily T, member 29...    32   2.7  
gi|237681069 spatacsin isoform 2 [Homo sapiens]                        31   3.5  
gi|93204888 spatacsin isoform 1 [Homo sapiens]                         31   3.5  
gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens]             31   4.6  
gi|187761337 transmembrane protease, serine 11B [Homo sapiens]         30   6.0  

>gi|167466219 dpy-19-like 4 [Homo sapiens]
          Length = 723

 Score = 1456 bits (3769), Expect = 0.0
 Identities = 723/723 (100%), Positives = 723/723 (100%)

Query: 1   MAEEEGPPVELRQRKKPKSSENKESAKEEKISDIPIPERAPKHVLFQRFAKIFIGCLAAV 60
           MAEEEGPPVELRQRKKPKSSENKESAKEEKISDIPIPERAPKHVLFQRFAKIFIGCLAAV
Sbjct: 1   MAEEEGPPVELRQRKKPKSSENKESAKEEKISDIPIPERAPKHVLFQRFAKIFIGCLAAV 60

Query: 61  TSGMMYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYELT 120
           TSGMMYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYELT
Sbjct: 61  TSGMMYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYELT 120

Query: 121 HNNKTVSLKTINAVQQMSLYPELIASILYQATGSNEIIEPVYFYIGIVFGLQGIYVTALF 180
           HNNKTVSLKTINAVQQMSLYPELIASILYQATGSNEIIEPVYFYIGIVFGLQGIYVTALF
Sbjct: 121 HNNKTVSLKTINAVQQMSLYPELIASILYQATGSNEIIEPVYFYIGIVFGLQGIYVTALF 180

Query: 181 VTSWLMSGTWLAGMLTVAWFVINRVDTTRIEYSIPLRENWALPYFACQIAALTGYLKSNL 240
           VTSWLMSGTWLAGMLTVAWFVINRVDTTRIEYSIPLRENWALPYFACQIAALTGYLKSNL
Sbjct: 181 VTSWLMSGTWLAGMLTVAWFVINRVDTTRIEYSIPLRENWALPYFACQIAALTGYLKSNL 240

Query: 241 NTYGERFCYLLMSASTYTFMMMWEYSHYLLFLQAISLFLLDTFSVEQSDKVYEVYKIYIF 300
           NTYGERFCYLLMSASTYTFMMMWEYSHYLLFLQAISLFLLDTFSVEQSDKVYEVYKIYIF
Sbjct: 241 NTYGERFCYLLMSASTYTFMMMWEYSHYLLFLQAISLFLLDTFSVEQSDKVYEVYKIYIF 300

Query: 301 SLFLGYLLQFENPALLVSPLLSLVAALMLAKCLQLNVKKGSFVAKIIKVINFYLVCTLTI 360
           SLFLGYLLQFENPALLVSPLLSLVAALMLAKCLQLNVKKGSFVAKIIKVINFYLVCTLTI
Sbjct: 301 SLFLGYLLQFENPALLVSPLLSLVAALMLAKCLQLNVKKGSFVAKIIKVINFYLVCTLTI 360

Query: 361 TLNIIMKMFVPHKENGHMLKFLEVKFGLNMTKNFTMNWLLCQESLQAPSQDFFLRLTQSS 420
           TLNIIMKMFVPHKENGHMLKFLEVKFGLNMTKNFTMNWLLCQESLQAPSQDFFLRLTQSS
Sbjct: 361 TLNIIMKMFVPHKENGHMLKFLEVKFGLNMTKNFTMNWLLCQESLQAPSQDFFLRLTQSS 420

Query: 421 LLPFYILVLIICFLSMLQVIFRRINGKSLKETVTLEDGRIGERPEIIYHVIHTILLGSLA 480
           LLPFYILVLIICFLSMLQVIFRRINGKSLKETVTLEDGRIGERPEIIYHVIHTILLGSLA
Sbjct: 421 LLPFYILVLIICFLSMLQVIFRRINGKSLKETVTLEDGRIGERPEIIYHVIHTILLGSLA 480

Query: 481 MVIEGLKYIWIPYVCMLAAFGVCSPELWMTLFKWLRLRTVHPILLALILSMAVPTIIGLS 540
           MVIEGLKYIWIPYVCMLAAFGVCSPELWMTLFKWLRLRTVHPILLALILSMAVPTIIGLS
Sbjct: 481 MVIEGLKYIWIPYVCMLAAFGVCSPELWMTLFKWLRLRTVHPILLALILSMAVPTIIGLS 540

Query: 541 LWKEFFPRLMTELMELQEFYDPDTVELMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVT 600
           LWKEFFPRLMTELMELQEFYDPDTVELMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVT
Sbjct: 541 LWKEFFPRLMTELMELQEFYDPDTVELMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVT 600

Query: 601 SLPLYNDDDLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVK 660
           SLPLYNDDDLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVK
Sbjct: 601 SLPLYNDDDLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVK 660

Query: 661 DLLDIANGHMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTRVYWNRSYFVYKINTVIS 720
           DLLDIANGHMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTRVYWNRSYFVYKINTVIS
Sbjct: 661 DLLDIANGHMVCEEGDKLTYSKYGRFCHEVKINYSPYVNYFTRVYWNRSYFVYKINTVIS 720

Query: 721 FQS 723
           FQS
Sbjct: 721 FQS 723


>gi|46409292 dpy-19-like 3 [Homo sapiens]
          Length = 716

 Score =  598 bits (1541), Expect = e-171
 Identities = 312/718 (43%), Positives = 469/718 (65%), Gaps = 16/718 (2%)

Query: 9   VELRQRKKPKSSENKES--AKEEKISDIPIPERAPKHVLFQRFAKIF---IGCLAAVTSG 63
           + +RQR++ +++E  E   A+EE +    +  + P     +R  KI    IG   A+  G
Sbjct: 2   MSIRQRREIRATEVSEDFPAQEENVK---LENKLPSGCTSRRLWKILSLTIGGTIALCIG 58

Query: 64  MMYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYELTHNN 123
           ++ ++YL+  HE   WFSN +E+EREI+F+ +  +YYSYYK ML+AP+  +G + L ++N
Sbjct: 59  LLTSVYLATLHENDLWFSNIKEVEREISFRTECGLYYSYYKQMLQAPTLVQGFHGLIYDN 118

Query: 124 KTVSLKTINAVQQMSLYPELIASILYQATGSNEIIEPVYFYIGIVFGLQGIYVTALFVTS 183
           KT S+KTIN +Q+M++Y E+  SILY+     + +EPVYFYI  +FGLQ IYVTAL++TS
Sbjct: 119 KTESMKTINLLQRMNIYQEVFLSILYRVLPIQKYLEPVYFYIYTLFGLQAIYVTALYITS 178

Query: 184 WLMSGTWLAGMLTVAWFVINRVDTTRIEYSIPLRENWALPYFACQIAALTGYLKSNLNTY 243
           WL+SGTWL+G+L   W+V NR+DTTR+E++IPLRENWALP+FA QIAA+T +L+ NL   
Sbjct: 179 WLLSGTWLSGLLAAFWYVTNRIDTTRVEFTIPLRENWALPFFAIQIAAITYFLRPNLQPL 238

Query: 244 GERFCYLLMSASTYTFMMMWEYSHYLLFLQAISLFLLDTFSVEQSDKVYEVYKIYIFSLF 303
            ER   L +  ST+ F + W+++ +++ +QA+ LF LD+  +  + K   +Y I I SL 
Sbjct: 239 SERLTLLAIFISTFLFSLTWQFNQFMMLMQALVLFTLDSLDMLPAVKATWLYGIQITSLL 298

Query: 304 LGYLLQFENPALLVSPLLSLVAALMLAKCLQLNVKKGSFVAKIIK-VINFYLVCTLTITL 362
           L  +LQF N  +L S L+S   ++ +A+ LQ N+K GSF+ ++ K +++ ++V  LT+ L
Sbjct: 299 LVCILQFFNSMILGSLLISFNLSVFIARKLQKNLKTGSFLNRLGKLLLHLFMVLCLTLFL 358

Query: 363 NIIMKMFVPHKENGHMLKFLEVKFGLNMTKNFTMNWLLCQESLQAPSQDFFLRLTQSSLL 422
           N I+K  +  K + H+ KFL+ KFGL  T++F  N  LC+E+      + F RL+ + L 
Sbjct: 359 NNIIKKILNLKSDEHIFKFLKAKFGLGATRDFDANLYLCEEAFGLLPFNTFGRLSDTLLF 418

Query: 423 PFYILVLIICFLSMLQVIFRRINGKSLKETV-TLEDGRIGERPEIIYHVIHTILLGSLAM 481
             YI VL I  +    V F  ++  + +++V  +E G +  +PE  Y++IHTIL G LA+
Sbjct: 419 YAYIFVLSITVIVAFVVAFHNLSDSTNQQSVGKMEKGTVDLKPETAYNLIHTILFGFLAL 478

Query: 482 VIEGLKYIWIPYVCMLAAFGVCSPELWMTLFKWLRLRTVHPILLALILSMAVPTIIGLSL 541
              G+KY+W  ++C+ A+FG+CSPE+W  L K + L     I    I+  +VP +I L L
Sbjct: 479 STMGMKYLWTSHMCVFASFGLCSPEIWELLLKSVHLYNPKRI---CIMRYSVPILILLYL 535

Query: 542 WKEFFPRLMTELMELQEFYDPDTVELMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVTS 601
             +F+P +M EL EL+EFYDPDTVELM WI    P  AVFAGS QL+  +KLCTG  +T+
Sbjct: 536 CYKFWPGMMDELSELREFYDPDTVELMNWINSNTPRKAVFAGSMQLLAGVKLCTGRTLTN 595

Query: 602 LPLYNDDDLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKD 661
            P Y D  L +R   +YQIY+KR+ E+++ +L S+  +Y+I+ED+IC E    RGCR++D
Sbjct: 596 HPHYEDSSLRERTRAVYQIYAKRAPEEVHALLRSFGTDYVILEDSICYERRHRRGCRLRD 655

Query: 662 LLDIANGHMVCEEGDK---LTYSKYGRFCHEVKINYSPYVNYFTRVYWNRSYFVYKIN 716
           LLDIANGHM+   G+    L  + + RFC E+K N  PYV YFTRV+ N+++ VYK++
Sbjct: 656 LLDIANGHMMDGPGENDPDLKPADHPRFCEEIKRNLPPYVAYFTRVFQNKTFHVYKLS 713


>gi|93277105 dpy-19-like 2 [Homo sapiens]
          Length = 758

 Score =  226 bits (575), Expect = 7e-59
 Identities = 182/701 (25%), Positives = 326/701 (46%), Gaps = 98/701 (13%)

Query: 59  AVTSGMMYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYE 118
           AV   +++ L+L    E    FS+   LERE+TF+ +  +YYSY+K +++APSF  G++ 
Sbjct: 113 AVFVAILHWLHLVTLFENDRHFSHLSSLEREMTFRTEMGLYYSYFKTIIEAPSFLEGLWM 172

Query: 119 LTHNNKTVSLKTINAVQQMSLYPELIASILY---------------------------QA 151
           + ++  T     INA+++  LYPE+I +  Y                           + 
Sbjct: 173 IMNDRLTEYPLIINAIKRFHLYPEVIIASWYCTFMGIMNLFGLETKTCWNVTRIEPLNEV 232

Query: 152 TGSNEIIEPVYFYIGIVFGLQGIYVTALFVTSWLMSGTWLAGMLTVAWFVINRVDTTRIE 211
                + +P  FY+G++F L G+ +   F+    +SGT L G++TV  F  N  + TR+ 
Sbjct: 233 QSCEGLGDPACFYVGVIFILNGLMMGLFFMYGAYLSGTQLGGLITVLCFFFNHGEATRVM 292

Query: 212 YSIPLRENWALPYFACQIAALTGYLKSNLNTYGERFCYLLMSASTYTFMMMWEYSHYLLF 271
           ++ PLRE+++ P+   Q+  LT  L+++ N   +R  ++ +  S   FM+ W+++ ++LF
Sbjct: 293 WTPPLRESFSYPFLVLQMCILTLILRTSSN---DRRPFIALCLSNVAFMLPWQFAQFILF 349

Query: 272 LQAISLFLLDTFSVEQSDKVYEVYKIYIFSLFLGYLLQFENPALLVSPLLSLVAALMLAK 331
            Q  SLF +      +  K  ++  + + S+ L ++L F N     S  LS   +  L  
Sbjct: 350 TQIASLFPMYVVGYIEPSKFQKIIYMNMISVTLSFILMFGN-----SMYLSSYYSSSLLM 404

Query: 332 CLQLNVKKGSFVAKIIKVINFYLVCTLTITLNIIMKMFVPHKENGHMLKFLEVKFGLNMT 391
              + +K+       +  +NF+L+         I            +LKFL  K  L ++
Sbjct: 405 TWAIILKRNEIQKLGVSKLNFWLIQGSAWWCGTI------------ILKFLTSKI-LGVS 451

Query: 392 KNFTMNWLLCQESLQ-----------APSQDFF-----LRLTQSSLLPFYILVLIICFLS 435
            +  ++ L+    L+           AP  DF      LR T++ LLP  ++++I CF+ 
Sbjct: 452 DHIRLSDLIAARILRYTDFDTLIYTCAPEFDFMEKATPLRYTKTLLLP--VVMVITCFIF 509

Query: 436 MLQVIFRRINGKSLKETVTLEDGRIGERPEIIYHVIHTILLGSLAMVIEGLKYIWIPYVC 495
              V   R     L   + L   ++ E  E+ +H +  ++  +LA++I  LK    P++C
Sbjct: 510 KKTV---RDISYVLATNIYLRK-QLLEHSELAFHTLQLLVFTALAILIMRLKMFLTPHMC 565

Query: 496 MLAAFGVCSPELWMTLFKWLRLRTVHPILLALILSMAVPTIIGLSLWKEFFPRLMTELME 555
           ++A+  +CS +L+  LF+ +R   V   +  ++  M++          + +  L  +   
Sbjct: 566 VMASL-ICSRQLFGWLFRRVRFEKV---IFGILTVMSI----------QGYANLRNQWSI 611

Query: 556 LQEFYDPDTVELMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVTSLPLYNDDDLLKRNE 615
           + EF +    EL+ WIK      AVFAG+   M +IKL T   + + P Y D DL  R +
Sbjct: 612 IGEFNNLPQEELLQWIKYSTTSDAVFAGAMPTMASIKLSTLHPIVNHPHYEDADLRARTK 671

Query: 616 NIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKDLLDIANGHMVCEEG 675
            +Y  YS++SA+++   L     NY ++E+A C  V    GC + ++ D+ +        
Sbjct: 672 IVYSTYSRKSAKEVRDKLLELHVNYYVLEEAWC-VVRTKPGCSMLEIWDVEDPSNAANP- 729

Query: 676 DKLTYSKYGRFCHEVKINYSPYVNYFTRVYWNRSYFVYKIN 716
                      C  +  +  P   YFT V+ N  Y V K+N
Sbjct: 730 ---------PLCSVLLEDARP---YFTTVFQNSVYRVLKVN 758


>gi|148839335 dpy-19-like 1 [Homo sapiens]
          Length = 675

 Score =  213 bits (542), Expect = 5e-55
 Identities = 166/641 (25%), Positives = 310/641 (48%), Gaps = 66/641 (10%)

Query: 59  AVTSGMMYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYE 118
           AV + +++  +++   E    FS+   LERE+ F+ +  +YYSY+K +++APSF  GV+ 
Sbjct: 27  AVFAAVLHWSHITHLFENDRHFSHLSTLEREMAFRTEMGLYYSYFKTIVEAPSFLNGVWM 86

Query: 119 LTHNNKTVSLKTINAVQQMSLYPELIASILYQA-TGSNEII------------------- 158
           + ++  T     IN +++ +LYPE+I +  Y+  T   ++I                   
Sbjct: 87  IMNDKLTEYPLVINTLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPI 146

Query: 159 -------EPVYFYIGIVFGLQGIYVTALFVTSWLMSGTWLAGMLTVAWFVINRVDTTRIE 211
                  +P  FY+ ++F L G+ +   F+    +SG+ L G++TV  F  N  + TR+ 
Sbjct: 147 ESCEGLGDPACFYVAVIFILNGLMMALFFIYGTYLSGSRLGGLVTVLCFFFNHGECTRVM 206

Query: 212 YSIPLRENWALPYFACQIAALTGYLKSNLNTYGERFCYLLMSASTYTFMMMWEYSHYLLF 271
           ++ PLRE+++ P+   Q+  +T  L++   T   R   + +  S   FM+ W+++ ++L 
Sbjct: 207 WTPPLRESFSYPFLVLQMLLVTHILRA---TKLYRGSLIALCISNVFFMLPWQFAQFVLL 263

Query: 272 LQAISLFLLDTFSVEQSDKVYEVYKIYIFSLFLGYLLQFENPALLVSPLLSLVAAL---- 327
            Q  SLF +         K+ ++  I++ SL L ++L F N  LL S   S +  +    
Sbjct: 264 TQIASLFAVYVVGYIDICKLRKIIYIHMISLALCFVLMFGNSMLLTSYYASSLVIIWGIL 323

Query: 328 -MLAKCLQLNVKKGSFVAKIIKVINFYLVCTLTITLNIIMKMFVPHKENGHMLKFLEVKF 386
            M    L++NV + S     + VI        T+ L  +        ++ H+   L  KF
Sbjct: 324 AMKPHFLKINVSELS-----LWVIQGCFWLFGTVILKYLTSKIFGIADDAHIGNLLTSKF 378

Query: 387 GLNMTKNFTMNWLLCQESLQAPSQDFFLRLTQSSLLPFYILVLIICFLSMLQVIFRRING 446
                K+F      C        ++  LR T++ LLP    V+++ F+++++ I   + G
Sbjct: 379 --FSYKDFDTLLYTCAAEFDFMEKETPLRYTKTLLLP----VVLVVFVAIVRKIISDMWG 432

Query: 447 KSLKETVTLEDGRIGERPEIIYHVIHTILLGSLAMVIEGLKYIWIPYVCMLAAFGVCSPE 506
              K+   +   +  +  E++YH +  +   +L ++I  LK    P++C++A+  +CS +
Sbjct: 433 VLAKQQTHVRKHQF-DHGELVYHALQLLAYTALGILIMRLKLFLTPHMCVMASL-ICSRQ 490

Query: 507 LWMTLFKWLRLRTVHP--ILLALILSMAVPTIIGLSLWKEFFPRLMTELMELQEFYDPDT 564
               LF WL  + VHP  I+ A++ +M++          +    L T+   + EF +   
Sbjct: 491 ----LFGWLFCK-VHPGAIVFAILAAMSI----------QGSANLQTQWNIVGEFSNLPQ 535

Query: 565 VELMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVTSLPLYNDDDLLKRNENIYQIYSKR 624
            EL+ WIK      AVFAG+   M ++KL     + + P Y D  L  R + +Y +YS++
Sbjct: 536 EELIEWIKYSTKPDAVFAGAMPTMASVKLSALRPIVNHPHYEDAGLRARTKIVYSMYSRK 595

Query: 625 SAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKDLLDI 665
           +AE++ + L   K NY I+E++ C       GC + ++ D+
Sbjct: 596 AAEEVKRELIKLKVNYYILEESWCVR-RSKPGCSMPEIWDV 635


>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
            sapiens]
          Length = 2506

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 18/239 (7%)

Query: 65   MYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYELTHNNK 124
            ++A+      + KF+    +  E E   +G    Y  Y K+ +KA   E   YE  ++N 
Sbjct: 1389 IFAVVAVQLFKGKFFHCTDESKEFEKDCRGK---YLLYEKNEVKARDREWKKYEFHYDNV 1445

Query: 125  TVSLKTINAVQQMSLYPELIASILYQATGSNEIIEPVYFYIGIVFGLQGIYVTALFVTSW 184
              +L T+  V     +P+++   +  AT  N+   P Y     +F     YV    V  +
Sbjct: 1446 LWALLTLFTVSTGEGWPQVLKHSV-DATFENQGPSPGYRMEMSIF-----YVVYFVVFPF 1499

Query: 185  LMSGTWLAGMLTVAWFVINRVDTTRIEYSIPLRENWALPYFACQIAALTGYLKSNLNTYG 244
                 ++A  L +  F   + D    EYS+   E   +  FA     LT ++  N  ++ 
Sbjct: 1500 FFVNIFVA--LIIITFQ-EQGDKMMEEYSLEKNERACID-FAISAKPLTRHMPQNKQSFQ 1555

Query: 245  ERFCYLLMSAS-TYTFMMMWEYSHYLLFLQAISLFLLDTFSVEQSDKVYEVYKIYIFSL 302
             R    ++S    YT M M   +  +L ++    F   + + E + +V+ +    +FSL
Sbjct: 1556 YRMWQFVVSPPFEYTIMAMIALNTIVLMMK----FYGASVAYENALRVFNIVFTSLFSL 1610


>gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo
            sapiens]
          Length = 2261

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 18/239 (7%)

Query: 65   MYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYELTHNNK 124
            ++A+      + KF+    +  E E   +G    Y  Y K+ +KA   E   YE  ++N 
Sbjct: 1390 IFAVVAVQLFKGKFFHCTDESKEFEKDCRGK---YLLYEKNEVKARDREWKKYEFHYDNV 1446

Query: 125  TVSLKTINAVQQMSLYPELIASILYQATGSNEIIEPVYFYIGIVFGLQGIYVTALFVTSW 184
              +L T+  V     +P+++   +  AT  N+   P Y     +F     YV    V  +
Sbjct: 1447 LWALLTLFTVSTGEGWPQVLKHSV-DATFENQGPSPGYRMEMSIF-----YVVYFVVFPF 1500

Query: 185  LMSGTWLAGMLTVAWFVINRVDTTRIEYSIPLRENWALPYFACQIAALTGYLKSNLNTYG 244
                 ++A  L +  F   + D    EYS+   E   +  FA     LT ++  N  ++ 
Sbjct: 1501 FFVNIFVA--LIIITFQ-EQGDKMMEEYSLEKNERACID-FAISAKPLTRHMPQNKQSFQ 1556

Query: 245  ERFCYLLMSAS-TYTFMMMWEYSHYLLFLQAISLFLLDTFSVEQSDKVYEVYKIYIFSL 302
             R    ++S    YT M M   +  +L ++    F   + + E + +V+ +    +FSL
Sbjct: 1557 YRMWQFVVSPPFEYTIMAMIALNTIVLMMK----FYGASVAYENALRVFNIVFTSLFSL 1611


>gi|4758762 asparaginyl-tRNA synthetase [Homo sapiens]
          Length = 548

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 8/127 (6%)

Query: 596 GWMVTSLPLYNDDDLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGPMR 655
           G  +  L  + ++  L ++  +Y      +  D++ I  SY+A        +        
Sbjct: 281 GATLFKLDYFGEEAFLTQSSQLYLETCLPALGDVFCIAQSYRAEQSRTRRHLAEYTHVEA 340

Query: 656 GCRVKDLLDIANG--HMVCEEGDKLTYSKYGRFCHEVKINYSP------YVNYFTRVYWN 707
            C      D+ N    +VC+  D++  S  G   HE+  N+ P       +NY   + W 
Sbjct: 341 ECPFLTFDDLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWL 400

Query: 708 RSYFVYK 714
           + + V K
Sbjct: 401 KEHDVKK 407


>gi|52317223 olfactory receptor, family 2, subfamily T, member 5
           [Homo sapiens]
          Length = 315

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 181 VTSWLMSGTWLAGMLTVAWFVINRVDTTRIEYSIPLRENWALPYFACQIAALTGYLKSNL 240
           V  +L SG W  G  +V  F++     T I  S P   +W + +F C++ A+T    S+ 
Sbjct: 144 VCLFLASGCWFLG--SVDGFML-----TPITMSFPFCRSWEIHHFFCEVPAVTILSCSDT 196

Query: 241 NTYGE--RFCYLLMSASTYTFMMMWEYSHYLLFLQAI 275
           + Y      C +LM     T +     S YLL L  +
Sbjct: 197 SLYETLMYLCCVLMLLIPVTIIS----SSYLLILLTV 229


>gi|52317217 olfactory receptor, family 2, subfamily T, member 29
           [Homo sapiens]
          Length = 309

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 181 VTSWLMSGTWLAGMLTVAWFVINRVDTTRIEYSIPLRENWALPYFACQIAALTGYLKSNL 240
           V  +L SG W  G  +V  F++     T I  S P   +W + +F C++ A+T    S+ 
Sbjct: 138 VCLFLASGCWFLG--SVDGFML-----TPITMSFPFCRSWEIHHFFCEVPAVTILSCSDT 190

Query: 241 NTYGE--RFCYLLMSASTYTFMMMWEYSHYLLFLQAI 275
           + Y      C +LM     T +     S YLL L  +
Sbjct: 191 SLYETLMYLCCVLMLLIPVTIIS----SSYLLILLTV 223


>gi|237681069 spatacsin isoform 2 [Homo sapiens]
          Length = 2330

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 550  MTELME--LQEFYDPDTVE--LMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVTSL 602
            MT+L E  LQ   +PD+    L+  +K+QAP+ +V A   Q   AI     W++TS+
Sbjct: 1438 MTDLFEILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSV 1494


>gi|93204888 spatacsin isoform 1 [Homo sapiens]
          Length = 2443

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 550  MTELME--LQEFYDPDTVE--LMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVTSL 602
            MT+L E  LQ   +PD+    L+  +K+QAP+ +V A   Q   AI     W++TS+
Sbjct: 1438 MTDLFEILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSV 1494


>gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens]
          Length = 352

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 19/83 (22%), Positives = 31/83 (37%)

Query: 215 PLRENWALPYFACQIAALTGYLKSNLNTYGERFCYLLMSASTYTFMMMWEYSHYLLFLQA 274
           P  E+W   Y  C    +   L     T  E   Y+L  A   +++    Y+        
Sbjct: 254 PFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFPTYAKSTRTTDE 313

Query: 275 ISLFLLDTFSVEQSDKVYEVYKI 297
           ++       S E   ++YEVYK+
Sbjct: 314 MTTEFFQNISSEHQTQLYEVYKL 336


>gi|187761337 transmembrane protease, serine 11B [Homo sapiens]
          Length = 416

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 86  LEREITFQGDSAIYYSYYKDMLKAPSFERGVYELTHNNKTVSLKTINAVQQMSLYPELIA 145
           +E+   +QGD  I    Y D  +  + +      T+ +K +  K +NA Q  S+Y E + 
Sbjct: 41  VEKTYYYQGDFHISGVTYNDNCENAASQAS----TNLSKDIETKMLNAFQNSSIYKEYVK 96

Query: 146 S----ILYQATGSN 155
           S    +L  A GSN
Sbjct: 97  SEVIKLLPNANGSN 110


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.139    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,382,784
Number of Sequences: 37866
Number of extensions: 1067464
Number of successful extensions: 3783
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3765
Number of HSP's gapped (non-prelim): 15
length of query: 723
length of database: 18,247,518
effective HSP length: 110
effective length of query: 613
effective length of database: 14,082,258
effective search space: 8632424154
effective search space used: 8632424154
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press