Guide to the Human Genome
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Name: DNAJC30 Sequence: fasta or formatted (226aa) NCBI GI: 22538497
Description:

DnaJ (Hsp40) homolog subfamily C member 30

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         24           2
 C cysteine            0.9          2           1
 D aspartate           4.9         11           1
 E glutamate           4.0          9           1
 F phenylalanine       4.4         10           1
 G glycine             7.1         16           1
 H histidine           1.3          3           1
 I isoleucine          4.0          9           3
 K lysine              1.8          4           1
 L leucine             8.8         20           2
 M methionine          1.8          4           1
 N asparagine          1.8          4           1
 P proline             6.6         15           3
 Q glutamine           4.9         11           1
 R arginine           14.2         32           2
 S serine              8.0         18           1
 T threonine           5.8         13           1
 V valine              1.8          4           2
 W tryptophan          2.2          5           2
 Y tyrosine            5.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog subfamily C member 30 
DNAJA3                0.084   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.084   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA1                0.082   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJB9                0.080   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJC4                0.080   DnaJ (Hsp40) homolog, subfamily C, member 4 
DNAJB2                0.080   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.080   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJC5                0.077   DnaJ (Hsp40) homolog, subfamily C, member 5 
DNAJA2                0.068   DnaJ subfamily A member 2 
DNAJA4                0.068   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.068   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJC7                0.066   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.066   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC10               0.064   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJB5                0.064   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.064   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.064   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB3                0.064   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB11               0.064   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJC17               0.064   DnaJ (Hsp40) homolog, subfamily C, member 17 
DNAJB1                0.061   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB8                0.061   DnaJ homolog, subfamily B, member 8 
DNAJB4                0.061   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJB6                0.061   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.061   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJC16               0.057   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJC5B               0.057   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJC11               0.055   DnaJ (Hsp40) homolog, subfamily C, member 11 
DNAJB7                0.055   DnaJ (Hsp40) homolog, subfamily B, member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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