Guide to the Human Genome
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Search of human proteins with 157502191

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157502191 putative binding protein 7a5 [Homo sapiens]
         (852 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157502191 putative binding protein 7a5 [Homo sapiens]             1707   0.0  
gi|7657562 SH3-domain binding protein 4 [Homo sapiens]                638   0.0  
gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...    35   0.39 
gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...    35   0.39 
gi|27734865 unc-5 homolog C-like [Homo sapiens]                        35   0.39 
gi|55749932 desmin [Homo sapiens]                                      32   2.5  
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]    31   4.3  
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa...    31   4.3  
gi|6005900 transcription factor Dp-1 [Homo sapiens]                    31   5.6  
gi|55749678 ninein-like [Homo sapiens]                                 30   7.3  

>gi|157502191 putative binding protein 7a5 [Homo sapiens]
          Length = 852

 Score = 1707 bits (4422), Expect = 0.0
 Identities = 852/852 (100%), Positives = 852/852 (100%)

Query: 1   MLITERKHFRSGRIAQSMSEANLIDMEAGKLSKSCNITECQDPDLLHNWPDAFTLRGNNA 60
           MLITERKHFRSGRIAQSMSEANLIDMEAGKLSKSCNITECQDPDLLHNWPDAFTLRGNNA
Sbjct: 1   MLITERKHFRSGRIAQSMSEANLIDMEAGKLSKSCNITECQDPDLLHNWPDAFTLRGNNA 60

Query: 61  SKVANPFWNQLSASNPFLDDITQLRNNRKRNNISILKEDPFLFCREIENGNSFDSSGDEL 120
           SKVANPFWNQLSASNPFLDDITQLRNNRKRNNISILKEDPFLFCREIENGNSFDSSGDEL
Sbjct: 61  SKVANPFWNQLSASNPFLDDITQLRNNRKRNNISILKEDPFLFCREIENGNSFDSSGDEL 120

Query: 121 DVHQLLRQTSSRNSGRSKSVSELLDILDDTAHAHQSIHNSDQILLHDLEWLKNDREAYKM 180
           DVHQLLRQTSSRNSGRSKSVSELLDILDDTAHAHQSIHNSDQILLHDLEWLKNDREAYKM
Sbjct: 121 DVHQLLRQTSSRNSGRSKSVSELLDILDDTAHAHQSIHNSDQILLHDLEWLKNDREAYKM 180

Query: 181 AWLSQRQLARSCLDLNTISQSPGWAQTQLAEVTIACKVNHQGGSVQLPESDITVHVPQGH 240
           AWLSQRQLARSCLDLNTISQSPGWAQTQLAEVTIACKVNHQGGSVQLPESDITVHVPQGH
Sbjct: 181 AWLSQRQLARSCLDLNTISQSPGWAQTQLAEVTIACKVNHQGGSVQLPESDITVHVPQGH 240

Query: 241 VAVGEFQEVSLRAFLDPPHMLNHDLSCTVSPLLEIMLGNLNTMEALLLEMKIGAEVRKDP 300
           VAVGEFQEVSLRAFLDPPHMLNHDLSCTVSPLLEIMLGNLNTMEALLLEMKIGAEVRKDP
Sbjct: 241 VAVGEFQEVSLRAFLDPPHMLNHDLSCTVSPLLEIMLGNLNTMEALLLEMKIGAEVRKDP 300

Query: 301 FSQVMTEMVCLHSLGKEGPFKVLSNCYIYKDTIQVKLIDLSQVMYLVVAAQAKALPSPAA 360
           FSQVMTEMVCLHSLGKEGPFKVLSNCYIYKDTIQVKLIDLSQVMYLVVAAQAKALPSPAA
Sbjct: 301 FSQVMTEMVCLHSLGKEGPFKVLSNCYIYKDTIQVKLIDLSQVMYLVVAAQAKALPSPAA 360

Query: 361 TIWDYIHKTTSIGIYGPKYIHPSFTVVLTVCGHNYMPGQLTISDIKKGGKNISPVVFQLW 420
           TIWDYIHKTTSIGIYGPKYIHPSFTVVLTVCGHNYMPGQLTISDIKKGGKNISPVVFQLW
Sbjct: 361 TIWDYIHKTTSIGIYGPKYIHPSFTVVLTVCGHNYMPGQLTISDIKKGGKNISPVVFQLW 420

Query: 421 GKQSFLLDKPQDLSISIFSCDPDFEVKTEGERKEIKQKQLEAGEVVHQQFLFSLVEHREM 480
           GKQSFLLDKPQDLSISIFSCDPDFEVKTEGERKEIKQKQLEAGEVVHQQFLFSLVEHREM
Sbjct: 421 GKQSFLLDKPQDLSISIFSCDPDFEVKTEGERKEIKQKQLEAGEVVHQQFLFSLVEHREM 480

Query: 481 HLFDFCVQVEPPNGEPVAQFSITTPDPTPNLKRLSNLPGYLQKKEEIKSAPLSPKILVKY 540
           HLFDFCVQVEPPNGEPVAQFSITTPDPTPNLKRLSNLPGYLQKKEEIKSAPLSPKILVKY
Sbjct: 481 HLFDFCVQVEPPNGEPVAQFSITTPDPTPNLKRLSNLPGYLQKKEEIKSAPLSPKILVKY 540

Query: 541 PTFQDKTLNFSNYGVTLKAVLRQSKIDYFLEYFKGDTIALLGEGKVKAIGQSKVKEWYVG 600
           PTFQDKTLNFSNYGVTLKAVLRQSKIDYFLEYFKGDTIALLGEGKVKAIGQSKVKEWYVG
Sbjct: 541 PTFQDKTLNFSNYGVTLKAVLRQSKIDYFLEYFKGDTIALLGEGKVKAIGQSKVKEWYVG 600

Query: 601 VLRGKIGLVHCKNVKVISKEQVMFMSDSVFTTRNLLEQIVLPLKKLTYIYSVVLTLVSEK 660
           VLRGKIGLVHCKNVKVISKEQVMFMSDSVFTTRNLLEQIVLPLKKLTYIYSVVLTLVSEK
Sbjct: 601 VLRGKIGLVHCKNVKVISKEQVMFMSDSVFTTRNLLEQIVLPLKKLTYIYSVVLTLVSEK 660

Query: 661 VYDWKVLADVLGYSHLSLEDFDQIQADKESEKVSYVIKKLKEDCHTERNTRKFLYELIVA 720
           VYDWKVLADVLGYSHLSLEDFDQIQADKESEKVSYVIKKLKEDCHTERNTRKFLYELIVA
Sbjct: 661 VYDWKVLADVLGYSHLSLEDFDQIQADKESEKVSYVIKKLKEDCHTERNTRKFLYELIVA 720

Query: 721 LLKMDCQELVARLIQEAAVLTSAVKLGKGWRELAEKLVRLTKQQMEAYEIPHRGNTGDVA 780
           LLKMDCQELVARLIQEAAVLTSAVKLGKGWRELAEKLVRLTKQQMEAYEIPHRGNTGDVA
Sbjct: 721 LLKMDCQELVARLIQEAAVLTSAVKLGKGWRELAEKLVRLTKQQMEAYEIPHRGNTGDVA 780

Query: 781 VEMMWKPAYDFLYTWSAHYGNNYRDVLQDLQSALDRMKNPVTKHWRELTGVLILVNSLEV 840
           VEMMWKPAYDFLYTWSAHYGNNYRDVLQDLQSALDRMKNPVTKHWRELTGVLILVNSLEV
Sbjct: 781 VEMMWKPAYDFLYTWSAHYGNNYRDVLQDLQSALDRMKNPVTKHWRELTGVLILVNSLEV 840

Query: 841 LRVTAFSTSEEV 852
           LRVTAFSTSEEV
Sbjct: 841 LRVTAFSTSEEV 852


>gi|7657562 SH3-domain binding protein 4 [Homo sapiens]
          Length = 963

 Score =  638 bits (1645), Expect = 0.0
 Identities = 361/826 (43%), Positives = 504/826 (61%), Gaps = 25/826 (3%)

Query: 44  DLLHNWPDAFTLRGNNASKVANPFWNQLSASNPFLDD----ITQLRNNRKRNNISILKED 99
           +LL  W D   + G   S   NPFWN +  +NPFL+     +  L     ++ + +L  D
Sbjct: 140 ELLGGWTDDKKVPGRMYSN--NPFWNGVQ-TNPFLNGNVPVMPSLDELNPKSTVDLLLFD 196

Query: 100 PFLFCREIENGNSFDSSG---DELDVHQLL-------RQTSSRNSGRSKSVSELLDILDD 149
                    +  + +S+G   DEL V   L       R      S RS S+SEL  +L  
Sbjct: 197 AGTSSFTESSSATTNSTGNIFDELPVTNGLHAEPPVRRDNPFFRSKRSYSLSEL-SVLQA 255

Query: 150 TAHAHQSIHNSDQILLHDLEWLKNDREAYKMAWLSQRQLARSCLDLNTISQSPGWAQTQL 209
            + A  S      +     E  ++ RE ++ AWL+ R+LARSC DL+ + QSPGW QTQ 
Sbjct: 256 KSDAPTSSSFFTGLKSPAPEQFQS-REDFRTAWLNHRKLARSCHDLDLLGQSPGWGQTQA 314

Query: 210 AEVTIACKVNHQGGSVQLPESDITVHVPQGHVAVGEFQEVSLRAFLDPPHMLNHDLSCTV 269
            E  I CK++  GG+VQLP++ I++HVP+GHVA GE Q++S++A LDPP  LN D SC++
Sbjct: 315 VETNIVCKLDSSGGAVQLPDTSISIHVPEGHVAPGETQQISMKALLDPPLELNSDRSCSI 374

Query: 270 SPLLEIMLGNLNTMEALLLEMKIGAEVRKDPFSQVMTEMVCLHSLGKEGPF-KVLSNCYI 328
           SP+LE+ L NL    +++LEMK+ AE++ D FS+    + CL S  KEGP+  V  NC  
Sbjct: 375 SPVLEVKLSNLEVKTSIILEMKVSAEIKNDLFSKSTVGLQCLRSDSKEGPYVSVPLNCSC 434

Query: 329 YKDTIQVKLIDLSQVMYLVVAAQAKALPSPAATIWDYIHKTTSIGIYGPKYIHPSFTVVL 388
             DT+Q +L +L   MY+ V A   ++  P+ T+WD+I+K  ++G+YGPK+IHPSF  V+
Sbjct: 435 -GDTVQAQLHNLEPCMYVAVVAHGPSILYPS-TVWDFINKKVTVGLYGPKHIHPSFKTVV 492

Query: 389 TVCGHNYMPGQLTISDIKKGGKNISPVVFQLWGKQSFLLDKPQDLSISIFSCDPDFEVKT 448
           T+ GH+  P  L +S++ +   N +PV  QLWGK  F+L +PQDL + +FS   ++EVK 
Sbjct: 493 TIFGHDCAPKTLLVSEVTRQAPNPAPVALQLWGKHQFVLSRPQDLKVCMFSNMTNYEVKA 552

Query: 449 EGERKEIKQKQLEAGEVVHQQFLFSLVEHREMHLFDFCVQVEPPNGEPVAQFSITTPDPT 508
             + K ++  QL+ G+V    F  +     E+  F   VQV+      + QF + TP P 
Sbjct: 553 SEQAKVVRGFQLKLGKVSRLIFPITSQNPNELSDFTLRVQVKDDQEAILTQFCVQTPQPP 612

Query: 509 PNLKRLSNLPGYLQKKEEIKSAPLSP-KILVKYPTFQDKTLNFSNYGVTLKAVLRQSKID 567
           P      +      KK E+    LSP     KYPTFQD+ ++   +G  LK V+RQ+K  
Sbjct: 613 PKSAIKPSGQRRFLKKNEVGKIILSPFATTTKYPTFQDRPVSSLKFGKLLKTVVRQNKNH 672

Query: 568 YFLEYFKGDTIALLGEGKVKAIGQSKVKEWYVGVLRGKIGLVHCKNVKVISKEQVMFMSD 627
           Y LEY KGD IALL E +V+  GQ   KEWY+G  +G++GLVH KNV V+ + +    S 
Sbjct: 673 YLLEYKKGDGIALLSEERVRLRGQLWTKEWYIGYYQGRVGLVHTKNVLVVGRARPSLCSG 732

Query: 628 SVFTTRNLLEQIVLPLKKLTYIYSVVLTLVSEKVYDWKVLADVLGYSHLSLEDFDQIQAD 687
              +T  LLEQI+ P K LTYIY+ V TL+ E +  W+  AD LGY +L L  F + + D
Sbjct: 733 PELSTSVLLEQILRPCKFLTYIYASVRTLLMENISSWRSFADALGYVNLPLTFFCRAELD 792

Query: 688 KESEKVSYVIKKLKEDCH-TERNTRK-FLYELIVALLKMDCQELVARLIQEAAVLTSAVK 745
            E E+V+ V++KLKEDC+ TE   RK F  EL++ALLKMDCQ LV RLIQ+  +LT+AV+
Sbjct: 793 SEPERVASVLEKLKEDCNNTENKERKSFQKELVMALLKMDCQGLVVRLIQDFVLLTTAVE 852

Query: 746 LGKGWRELAEKLVRLTKQQMEAYEIPHRGNTGDVAVEMMWKPAYDFLYTWSAHYGNNYRD 805
           + + WRELAEKL +++KQQM+AYE PHR   G V  E MWKPAYDFL TWS   G++YRD
Sbjct: 853 VAQRWRELAEKLAKVSKQQMDAYESPHRDRNGVVDSEAMWKPAYDFLLTWSHQIGDSYRD 912

Query: 806 VLQDLQSALDRMKNPVTKHWRELTGVLILVNSLEVLRVTAFSTSEE 851
           V+Q+L   LD+MKNP+TK W+ LTG LILVNSL+VLR  AFS +++
Sbjct: 913 VIQELHLGLDKMKNPITKRWKHLTGTLILVNSLDVLRAAAFSPADQ 958


>gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
            isoform 2 [Homo sapiens]
          Length = 2472

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 11/200 (5%)

Query: 114  DSSGDE--LDVHQLLRQTSSRNSGRSKSVSELLDILDDTAHAHQSIHNSDQILLHDLEWL 171
            D +G E  L+ HQ  R      +G  ++  +    L   AH H +     Q     L+ L
Sbjct: 1370 DVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQL--LAHGHYASPEIKQ----KLDIL 1423

Query: 172  KNDREAYKMAWLSQRQLARSCLDLNTISQSPGWAQTQLAEVTIACKVNHQGGSVQLPESD 231
              +R   + AW+ +R +   CL+L    +    A+  +A          +G S+   E+ 
Sbjct: 1424 DQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEAL 1483

Query: 232  ITVHVP-QGHVAVGEFQEVSLRAFLDPPHMLNHDLSCTVSPLLEIMLGNLNTMEALLLE- 289
            I  H      + V E +  +L+AF D      H     +S     +L     ++A ++E 
Sbjct: 1484 IKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 1543

Query: 290  -MKIGAEVRKDPFSQVMTEM 308
              K+G       FS+ + E+
Sbjct: 1544 RSKLGESQTLQQFSRDVDEI 1563


>gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
            isoform 1 [Homo sapiens]
          Length = 2477

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 11/200 (5%)

Query: 114  DSSGDE--LDVHQLLRQTSSRNSGRSKSVSELLDILDDTAHAHQSIHNSDQILLHDLEWL 171
            D +G E  L+ HQ  R      +G  ++  +    L   AH H +     Q     L+ L
Sbjct: 1370 DVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQL--LAHGHYASPEIKQ----KLDIL 1423

Query: 172  KNDREAYKMAWLSQRQLARSCLDLNTISQSPGWAQTQLAEVTIACKVNHQGGSVQLPESD 231
              +R   + AW+ +R +   CL+L    +    A+  +A          +G S+   E+ 
Sbjct: 1424 DQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEAL 1483

Query: 232  ITVHVP-QGHVAVGEFQEVSLRAFLDPPHMLNHDLSCTVSPLLEIMLGNLNTMEALLLE- 289
            I  H      + V E +  +L+AF D      H     +S     +L     ++A ++E 
Sbjct: 1484 IKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 1543

Query: 290  -MKIGAEVRKDPFSQVMTEM 308
              K+G       FS+ + E+
Sbjct: 1544 RSKLGESQTLQQFSRDVDEI 1563


>gi|27734865 unc-5 homolog C-like [Homo sapiens]
          Length = 518

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 16/37 (43%), Positives = 26/37 (70%)

Query: 215 ACKVNHQGGSVQLPESDITVHVPQGHVAVGEFQEVSL 251
           A +V+H+GG + L ++ I++ +P G VAVG  + VSL
Sbjct: 105 AREVDHRGGCLMLQDTGISLLIPPGAVAVGRQERVSL 141


>gi|55749932 desmin [Homo sapiens]
          Length = 470

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 34/164 (20%), Positives = 68/164 (41%), Gaps = 10/164 (6%)

Query: 679 EDFDQIQADKESEKVSYVIKKLKEDCHTERNTRKFLYELIVALLKMDCQELVARLIQEAA 738
           E+  ++QA  + ++V   +   K D        +  YE I A    + +E     + +  
Sbjct: 245 EEIRELQAQLQEQQVQVEMDMSKPDLTAALRDIRAQYETIAAKNISEAEEWYKSKVSD-- 302

Query: 739 VLTSAVKLGKGWRELAEKLVRLTKQQMEAY--EIPHRGNTGDVAVEMMWKPAYDFLYTWS 796
            LT A          A++ +   + Q+++Y  EI     T D  +  M +    F     
Sbjct: 303 -LTQAANKNNDALRQAKQEMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRF----- 356

Query: 797 AHYGNNYRDVLQDLQSALDRMKNPVTKHWRELTGVLILVNSLEV 840
           A   + Y+D +  L+  +  +K+ + +H RE   +L +  +L+V
Sbjct: 357 ASEASGYQDNIARLEEEIRHLKDEMARHLREYQDLLNVKMALDV 400


>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
          Length = 1976

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 43/141 (30%)

Query: 665 KVLADVLGYSHLSLEDFDQIQADKESEKVSYVIKKLKEDCHTERNTRKFLYELIVALLKM 724
           KV++ VL + ++S +   +   D+ S   + V +KL   CH               LL M
Sbjct: 348 KVVSSVLQFGNISFKK--ERNTDQASMPENTVAQKL---CH---------------LLGM 387

Query: 725 DCQELVARLIQEAAVLTSAVKLGKGWRELAEKLVRLTKQQMEAYEIPHRGNTGDVAVEMM 784
           +  E         A+LT  +K+G+ + + A+     TK+Q             D AVE +
Sbjct: 388 NVMEFTR------AILTPRIKVGRDYVQKAQ-----TKEQ------------ADFAVEAL 424

Query: 785 WKPAYDFLYTWSAHYGNNYRD 805
            K  Y+ L+ W  H  N   D
Sbjct: 425 AKATYERLFRWLVHRINKALD 445


>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
           sapiens]
          Length = 641

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 31/126 (24%)

Query: 667 LADVLGYSHLSLEDFDQIQADKESE---------KVSYVIKKLKEDCHTERNT----RKF 713
           L ++   +   L D  Q++ D E+E         ++   +K L++D H +++T    R+ 
Sbjct: 329 LDEMYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEKDIHEKQDTLIGLRQQ 388

Query: 714 LYELIVALLKM------------DCQELVARLIQEAAVLTSAVKLGKGWRELAEKLVRLT 761
           L E+    ++M            +  E++ARL ++   +T+A+      R+L ++L +  
Sbjct: 389 LEEVKAINIEMYQKLQGSEDGLKEKNEIIARLEEKTNKITAAM------RQLEQRLQQAE 442

Query: 762 KQQMEA 767
           K QMEA
Sbjct: 443 KAQMEA 448


>gi|6005900 transcription factor Dp-1 [Homo sapiens]
          Length = 410

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 443 DFEVKTEGERKEIKQKQLEAGEVVHQQFLFSLVEHREMHLFDFCVQVEPPN 493
           + EV+ +   + IKQKQ +  E++ QQ  F  +  R  H      +  PPN
Sbjct: 204 NLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASRPPPPN 254


>gi|55749678 ninein-like [Homo sapiens]
          Length = 1382

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 19/146 (13%)

Query: 68   WNQLSASNPFL-DDITQLR---------NNRKRNNISILKEDPFLFCREIE----NGNSF 113
            +++LS  N  L +D+ ++R         ++ +R  I +LK+D    C E+E       ++
Sbjct: 1086 FHRLSEENTLLKNDLGRVRQELEAAESTHDAQRKEIEVLKKDKEKACSEMEVLNRQNQNY 1145

Query: 114  DSSGDELDVHQL-LRQTSSRNSGRSK----SVSELLDILDDTAHAHQSIHNSDQILLHDL 168
                 +L+V  L L Q +S +  +++    ++  L   L++   + Q   +  Q L  +L
Sbjct: 1146 KDQLSQLNVRVLQLGQEASTHQAQNEEHRVTIQMLTQSLEEVVRSGQQQSDQIQKLRVEL 1205

Query: 169  EWLKNDREAYKMAWLSQRQLARSCLD 194
            E L  + ++ ++ W    Q      D
Sbjct: 1206 ECLNQEHQSLQLPWSELTQTLEESQD 1231


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,339,833
Number of Sequences: 37866
Number of extensions: 1400329
Number of successful extensions: 3640
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3624
Number of HSP's gapped (non-prelim): 19
length of query: 852
length of database: 18,247,518
effective HSP length: 111
effective length of query: 741
effective length of database: 14,044,392
effective search space: 10406894472
effective search space used: 10406894472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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