Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 157276599

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157276599 bactericidal/permeability-increasing protein
precursor [Homo sapiens]
         (487 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157276599 bactericidal/permeability-increasing protein precur...   970   0.0  
gi|31652249 lipopolysaccharide-binding protein precursor [Homo s...   422   e-118
gi|28372551 bactericidal/permeability-increasing protein-like 2 ...   209   6e-54
gi|5453914 phospholipid transfer protein isoform a precursor [Ho...   174   2e-43
gi|33356541 phospholipid transfer protein isoform b precursor [H...   138   1e-32
gi|239757484 PREDICTED: similar to bactericidal/permeability-inc...   121   2e-27
gi|169636439 cholesteryl ester transfer protein, plasma precurso...   107   3e-23
gi|15055535 bactericidal/permeability-increasing protein-like 1 ...   100   3e-21
gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]                87   4e-17
gi|28372525 bactericidal/permeability-increasing protein-like 3 ...    83   5e-16
gi|32964823 antimicrobial peptide RYA3 [Homo sapiens]                  71   3e-12
gi|40807482 LPLUNC1 protein precursor [Homo sapiens]                   47   5e-05
gi|44681484 cell division cycle associated 2 [Homo sapiens]            31   2.9  
gi|237858621 polyamine modulated factor 1 binding protein 1 isof...    29   8.4  
gi|58761508 midnolin [Homo sapiens]                                    29   8.4  
gi|52145312 hypothetical protein LOC118611 [Homo sapiens]              29   8.4  

>gi|157276599 bactericidal/permeability-increasing protein precursor
           [Homo sapiens]
          Length = 487

 Score =  970 bits (2507), Expect = 0.0
 Identities = 487/487 (100%), Positives = 487/487 (100%)

Query: 1   MRENMARGPCNAPRWASLMVLVAIGTAVTAAVNPGVVVRISQKGLDYASQQGTAALQKEL 60
           MRENMARGPCNAPRWASLMVLVAIGTAVTAAVNPGVVVRISQKGLDYASQQGTAALQKEL
Sbjct: 1   MRENMARGPCNAPRWASLMVLVAIGTAVTAAVNPGVVVRISQKGLDYASQQGTAALQKEL 60

Query: 61  KRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISG 120
           KRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISG
Sbjct: 61  KRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISG 120

Query: 121 KWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKS 180
           KWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKS
Sbjct: 121 KWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKS 180

Query: 181 KVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGL 240
           KVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGL
Sbjct: 181 KVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGL 240

Query: 241 VAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLV 300
           VAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLV
Sbjct: 241 VAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLV 300

Query: 301 YQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQ 360
           YQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQ
Sbjct: 301 YQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQ 360

Query: 361 PTGLTFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELK 420
           PTGLTFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELK
Sbjct: 361 PTGLTFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELK 420

Query: 421 HSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLF 480
           HSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLF
Sbjct: 421 HSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLF 480

Query: 481 GADVVYK 487
           GADVVYK
Sbjct: 481 GADVVYK 487


>gi|31652249 lipopolysaccharide-binding protein precursor [Homo
           sapiens]
          Length = 481

 Score =  422 bits (1086), Expect = e-118
 Identities = 210/469 (44%), Positives = 306/469 (65%), Gaps = 2/469 (0%)

Query: 18  LMVLVAIGTAVTAAVNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHL 77
           L+ L+   T      NPG+V RI+ KGL YA+Q+G  ALQ EL RI +PD++   +I H+
Sbjct: 12  LLALLLTSTPEALGANPGLVARITDKGLQYAAQEGLLALQSELLRITLPDFTGDLRIPHV 71

Query: 78  GKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDL 137
           G+G Y F+S++I   +L  S +  VP  GL  SIS+++I++ G+WK +K F K+ G+FD+
Sbjct: 72  GRGRYEFHSLNIHSCELLHSALRPVPGQGLSLSISDSSIRVQGRWKVRKSFFKLQGSFDV 131

Query: 138 SIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESAL 197
           S++G+SIS +L LGS  +SG+PT+T SSCSS I  V V +S   +GWL+ LFH +IES  
Sbjct: 132 SVKGISISVNLLLGSE-SSGRPTVTASSCSSDIADVEVDMS-GDLGWLLNLFHNQIESKF 189

Query: 198 RNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKG 257
           +  + S++CE +  SVSS+LQPY QTLPV T+IDS A I+Y LV  P  TA+ L+V  KG
Sbjct: 190 QKVLESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKG 249

Query: 258 EFYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIP 317
           E +  NH +P      VM  P  H++MVY  +SDY FNTA LVY E G L  ++ DDMIP
Sbjct: 250 EIFHRNHRSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLNFSITDDMIP 309

Query: 318 KESKFRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAV 377
            +S  RLTTK F  F+P +A+ +PNM +++  S  + P L+  P  L+  P +++ AF +
Sbjct: 310 PDSNIRLTTKSFRPFVPRLARLYPNMNLELQGSVPSAPLLNFSPGNLSVDPYMEIDAFVL 369

Query: 378 LPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMN 437
           LP+SS   +F + + T  S  ++  ++++ G LK  ++ +ELK S +G F  ELL+ ++N
Sbjct: 370 LPSSSKEPVFRLSVATNVSATLTFNTSKITGFLKPGKVKVELKESKVGLFNAELLEALLN 429

Query: 438 YIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVY 486
           Y +     P+ N+KL +GFPLP   RVQLY++ LQ H++FL  GA+V Y
Sbjct: 430 YYILNTFYPKFNDKLAEGFPLPLLKRVQLYDLGLQIHKDFLFLGANVQY 478


>gi|28372551 bactericidal/permeability-increasing protein-like 2
           [Homo sapiens]
          Length = 507

 Score =  209 bits (531), Expect = 6e-54
 Identities = 130/459 (28%), Positives = 227/459 (49%), Gaps = 8/459 (1%)

Query: 32  VNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGH--YSFYSMDI 89
           + PG+  RI+Q+ LDY  Q G   +++ LK  K+PD S S  ++ L   +  Y+F ++ I
Sbjct: 26  IYPGIKARITQRALDYGVQAGMKMIEQMLKEKKLPDLSGSESLEFLKVDYVNYNFSNIKI 85

Query: 90  REFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLK 149
             F  P++ ++ VP VG+K   ++    IS  W  +    + +G  DL + G+  +  + 
Sbjct: 86  SAFSFPNTSLAFVPGVGIKALTNHGTANISTDWGFESPLFQDTGGADLFLSGVYFTGIII 145

Query: 150 LGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKV 209
           L  N   G PT+    C + ++  HV  S  ++  L   F + +E  +   +N  +C  +
Sbjct: 146 LTRNDF-GHPTLKLQDCYAQLSHAHVSFS-GELSVLYNSFAEPMEKPILKNLNEMLCPII 203

Query: 210 TNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPP 269
            + V + L     TL V+TKID+   ++Y L++ P  T   LD+ +KG FY   +   PP
Sbjct: 204 ASEVKA-LNANLSTLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPP 262

Query: 270 FAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFF 329
           F+P     P   + M+Y+G+++YFF +A   +  AGV  +TL  + I   + F   ++  
Sbjct: 263 FSPVPFVLPERSNSMLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEI--SNHFVQNSQGL 320

Query: 330 GTFLPEVAKKF-PNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSLASLFL 388
           G  L  +A+ +  +    + + A+ PP +++QP   T      +       NS++ ++  
Sbjct: 321 GNVLSRIAEIYILSQPFMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVS 380

Query: 389 IGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRV 448
           +    + S+ +     RLV  L L+R  L L  SN     V   ++I++ I+   VLP  
Sbjct: 381 MDFVASTSVGLVILGQRLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLA 440

Query: 449 NEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK 487
           N KLQ+GFPL  P +    N  ++  + FLL   D+ Y+
Sbjct: 441 NAKLQQGFPLSNPHKFLFVNSDIEVLEGFLLISTDLKYE 479


>gi|5453914 phospholipid transfer protein isoform a precursor [Homo
           sapiens]
          Length = 493

 Score =  174 bits (441), Expect = 2e-43
 Identities = 123/459 (26%), Positives = 218/459 (47%), Gaps = 24/459 (5%)

Query: 34  PGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQ 93
           PG  +R++ K L+   Q+G   L++EL+ I IPD          G  +Y+   + + E Q
Sbjct: 20  PGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKE-----GHFYYNISEVKVTELQ 74

Query: 94  LPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSN 153
           L SS++   P   L   I+NA++ +  + +    F    G  + S EG+SI   L+L  +
Sbjct: 75  LTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFFYDGGYINASAEGVSIRTGLELSRD 134

Query: 154 PTSGKPTITCSSCSSHINSVHVHISKS--KVGWLIQLFHKKIESALRNKMNSQVCEKVTN 211
           P +G+  ++  SC + ++ +H     +  KV   +  F   I S +R  +N Q+C  + +
Sbjct: 135 P-AGRMKVSNVSCQASVSRMHAAFGGTFKKVYDFLSTF---ITSGMRFLLNQQICPVLYH 190

Query: 212 SVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHN---PP 268
           + +  L     T+PV + +D + GI+Y L+  P  +   LD+  +G F+     N   P 
Sbjct: 191 AGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPN 250

Query: 269 PFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKF 328
               P ++     +RMVY+  S++FF++A   Y  AG L++ L  D +P +    L   +
Sbjct: 251 RAVEPQLQ---EEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATY 307

Query: 329 FGTFL---PEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSLAS 385
           FG+ +   P V      +K+++ V A  PP  +++P+G T      V    V P+     
Sbjct: 308 FGSIVLLSPAVIDS--PLKLELRVLA--PPRCTIKPSGTTISVTASVTIALVPPDQPEVQ 363

Query: 386 LFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVL 445
           L  + M    S +++     L  +L L R  +   HS +    +  LQ  +  ++ I V+
Sbjct: 364 LSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVM 423

Query: 446 PRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADV 484
           P +NE+  +G  +P P  +   + V+  H  FL  GAD+
Sbjct: 424 PMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADL 462


>gi|33356541 phospholipid transfer protein isoform b precursor [Homo
           sapiens]
          Length = 441

 Score =  138 bits (347), Expect = 1e-32
 Identities = 112/455 (24%), Positives = 195/455 (42%), Gaps = 68/455 (14%)

Query: 34  PGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQ 93
           PG  +R++ K L+   Q+G   L++EL+ I IPD          G  +Y+   + + E Q
Sbjct: 20  PGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGK-----EGHFYYNISEVKVTELQ 74

Query: 94  LPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSN 153
           L SS++   P   L   I+NA++ +  + +    FLK+   +D             L + 
Sbjct: 75  LTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFLKV---YDF------------LSTF 119

Query: 154 PTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSV 213
            TSG                                       +R  +N Q+C  + ++ 
Sbjct: 120 ITSG---------------------------------------MRFLLNQQICPVLYHAG 140

Query: 214 SSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHN---PPPF 270
           +  L     T+PV + +D + GI+Y L+  P  +   LD+  +G F+     N   P   
Sbjct: 141 TVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPNRA 200

Query: 271 APPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFFG 330
             P ++     +RMVY+  S++FF++A   Y  AG L++ L  D +P +    L   +FG
Sbjct: 201 VEPQLQ---EEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATYFG 257

Query: 331 TF-LPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSLASLFLI 389
           +  L   A     +K+++ V A  PP  +++P+G T      V    V P+     L  +
Sbjct: 258 SIVLLSPAVIDSPLKLELRVLA--PPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSM 315

Query: 390 GMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVN 449
            M    S +++     L  +L L R  +   HS +    +  LQ  +  ++ I V+P +N
Sbjct: 316 TMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLN 375

Query: 450 EKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADV 484
           E+  +G  +P P  +   + V+  H  FL  GAD+
Sbjct: 376 ERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADL 410


>gi|239757484 PREDICTED: similar to
           bactericidal/permeability-increasing protein [Homo
           sapiens]
          Length = 159

 Score =  121 bits (303), Expect = 2e-27
 Identities = 59/59 (100%), Positives = 59/59 (100%)

Query: 429 VELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK 487
           VELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK
Sbjct: 101 VELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK 159



 Score =  108 bits (269), Expect = 1e-23
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 4/80 (5%)

Query: 205 VCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENH 264
           VCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMK E   +  
Sbjct: 49  VCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKVELLQDIM 108

Query: 265 HNPPPFAPPVMEFPAAHDRM 284
           +    +  P++  P  ++++
Sbjct: 109 N----YIVPILVLPRVNEKL 124


>gi|169636439 cholesteryl ester transfer protein, plasma precursor
           [Homo sapiens]
          Length = 493

 Score =  107 bits (266), Expect = 3e-23
 Identities = 112/488 (22%), Positives = 205/488 (42%), Gaps = 34/488 (6%)

Query: 16  ASLMVLVAIGTAVTAAVNP----GVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDS 71
           A+++ L  +G A   +       G+V RI++  L   + +    +Q   +R   PD +  
Sbjct: 4   ATVLTLALLGNAHACSKGTSHEAGIVCRITKPALLVLNHETAKVIQTAFQRASYPDITGE 63

Query: 72  FKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWK---AQKRF 128
             +  LG+  Y  +++ I    + SSQ+ +V    +  SI N ++   G  K       +
Sbjct: 64  KAMMLLGQVKYGLHNIQISHLSIASSQVELVEAKSIDVSIQNVSVVFKGTLKYGYTTAWW 123

Query: 129 LKMSGNFDLSIEGMSISADLKLGSNPT--SGKPTITCSSCSSHINSVHVHI-SKSKVGWL 185
           L +  + D  I+    + DL++ +  T  SG+       C    + + +H+  + + GW+
Sbjct: 124 LGIDQSIDFEIDS---AIDLQINTQLTCDSGRVRTDAPDCYLSFHKLLLHLQGEREPGWI 180

Query: 186 IQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPA 245
            QLF   I   L+  +  Q+C+++ N +S+ +  + QT       D   G++  L   P 
Sbjct: 181 KQLFTNFISFTLKLVLKGQICKEI-NVISNIMADFVQTRAASILSDGDIGVDISLTGDPV 239

Query: 246 TTAETLDVQMKGEFYSENHHNP---PPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQ 302
            TA  L+   KG F  +N       P F+P ++       RM+Y   S+  F++   V  
Sbjct: 240 ITASYLESHHKGHFIYKNVSEDLPLPTFSPTLL----GDSRMLYFWFSERVFHSLAKVAF 295

Query: 303 EAGVLKMTLRDDMIPKESKFRLTTKFFGT---FLPEVAKKFPNMKIQIHVSASTPPHLSV 359
           + G L ++L  D    E K  L T  F T      EV   FP+ + Q+ V     P +S 
Sbjct: 296 QDGRLMLSLMGD----EFKAVLETWGFNTNQEIFQEVVGGFPS-QAQVTVHCLKMPKISC 350

Query: 360 QPTGLTFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLEL 419
           Q  G+    +V V+     P+   +  +        +++ S    +L   L LD  +   
Sbjct: 351 QNKGVVVNSSVMVKFLFPRPDQQHSVAYTFEEDIVTTVQASYSKKKLFLSL-LDFQITPK 409

Query: 420 KHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGF-PLPTPARVQLYNVV---LQPHQ 475
             SN+     E +Q  +  ++  + +P V  +L+  F  L     V L++++   +    
Sbjct: 410 TVSNLTESSSESVQSFLQSMITAVGIPEVMSRLEVVFTALMNSKGVSLFDIINPEIITRD 469

Query: 476 NFLLFGAD 483
            FLL   D
Sbjct: 470 GFLLLQMD 477


>gi|15055535 bactericidal/permeability-increasing protein-like 1
           [Homo sapiens]
          Length = 458

 Score =  100 bits (249), Expect = 3e-21
 Identities = 108/484 (22%), Positives = 209/484 (43%), Gaps = 40/484 (8%)

Query: 15  WAS-LMVLVAIGTAVTAAVNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFK 73
           WAS L +L+A+   V  A  PG VVR+++  L Y S+ G A LQ+ L ++ +P + D   
Sbjct: 3   WASRLGLLLALLLPVVGASTPGTVVRLNKAALSYVSEIGKAPLQRAL-QVTVPHFLD--- 58

Query: 74  IKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSG 133
                   +S  ++     ++ +     VP + LKF I+   +++        +  +   
Sbjct: 59  --------WSGEALQPTRIRILNVH---VPRLHLKF-IAGFGVRLLAAANFTFKVFRAPE 106

Query: 134 NFDLSIEGMSISADLKLGSNPTSGKPTITCSSC---SSHINSVHVHISKSKVGWLIQLFH 190
             +L++  + + AD ++ +  +   P ++ S+C   S H N      S S    L+ L  
Sbjct: 107 PLELTLP-VELLADTRV-TQSSIRTPVVSISACSLFSGHANEFDGSNSTSHA--LLVLVQ 162

Query: 191 KKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAET 250
           K I++ L NK+    C  ++N V   +  +  TL  +  +   + I Y +V+ P  T++ 
Sbjct: 163 KHIKAVLSNKL----CLSISNLVQG-VNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDY 217

Query: 251 LDVQMKGEFYSENH-----HNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAG 305
           + +++    +          +  PF  P          M  +GLS   F++A L+ Q+AG
Sbjct: 218 ISLEVNAVLFLLGKPIILPTDATPFVLP--RHVGTEGSMATVGLSQQLFDSALLLLQKAG 275

Query: 306 VLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPN-MKIQIHVSASTPPHLSVQPTGL 364
            L + +   +  +     L T   G  +PEVA++FP  M + + V     P   +     
Sbjct: 276 ALNLDITGQL--RSDDNLLNTSALGRLIPEVARQFPEPMPVVLKVRLGATPVAMLHTNNA 333

Query: 365 TFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELK-LDRLLLELKHSN 423
           T      V+  A   NS+  SLF + +     +++S    +L G    L  + L +  SN
Sbjct: 334 TLRLQPFVEVLATASNSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSN 393

Query: 424 IGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGAD 483
           +G    + ++ +M  +    +L  +N  L  G  LP    +      +  ++ +++  + 
Sbjct: 394 VGFIDTDQVRTLMGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEGYVVISSG 453

Query: 484 VVYK 487
           + Y+
Sbjct: 454 LFYQ 457


>gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]
          Length = 614

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 86/403 (21%), Positives = 172/403 (42%), Gaps = 26/403 (6%)

Query: 89  IREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADL 148
           I E  LP   + ++P VG+  S+    + I+GK         + G  D+++E ++I+A +
Sbjct: 229 IVELTLPRVSVRLLPGVGVYLSLYT-RVAINGK--------SLIGFLDIAVE-VNITAKV 278

Query: 149 KLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEK 208
           +L  + T G P +    C + +  + V + +  +  L+     ++ + +   +   + + 
Sbjct: 279 RLTMDRT-GYPRLVIERCDTLLGGIKVKLLRGLLPNLVDNLVNRVLADVLPDLLCPIVDV 337

Query: 209 VTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMK---GEFYSENHH 265
           V   V+ +L      +P    +  +  + Y   + P  T E L++ +    GE       
Sbjct: 338 VLGLVNDQLGLVDSLIP----LGILGSVQYTFSSLPLVTGEFLELDLNTLVGEAGGGLID 393

Query: 266 NP---PPFAP-PVMEFPAAHDRMV-YLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKES 320
            P   P  +P P+ E P   D     L +S  F  +   + Q+   L + + + M   E 
Sbjct: 394 YPLGWPAVSPKPMPELPPMGDNTKSQLAMSANFLGSVLTLLQKQHALDLDITNGMF--EE 451

Query: 321 KFRLTTKFFGTFLPEVAKKFP-NMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLP 379
              LTT   G  +P+V +++P +  + I +    PP + +Q            +     P
Sbjct: 452 LPPLTTATLGALIPKVFQQYPESCPLIIRIQVLNPPSVMLQKDKALVKVLATAEVMVSQP 511

Query: 380 NSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYI 439
                ++ LI + T      S E ++L+ + KL++  L L+ SN+G F + L++ ++  I
Sbjct: 512 KDLETTICLIDVDTEFLASFSTEGDKLMIDAKLEKTSLNLRTSNVGNFDIGLMEVLVEKI 571

Query: 440 VPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGA 482
             +  +P +N  L  G PLP    +   N  +   ++ L+  A
Sbjct: 572 FDLAFMPAMNAVLGSGVPLPKILNIDFSNADIDVLEDLLVLSA 614


>gi|28372525 bactericidal/permeability-increasing protein-like 3
           [Homo sapiens]
          Length = 453

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 89/378 (23%), Positives = 164/378 (43%), Gaps = 20/378 (5%)

Query: 86  SMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSIS 145
           ++ +++ QLP   ++ VP VG+ F   +  + ++GK         M GN ++ I  ++I+
Sbjct: 66  NLKVKDVQLPVITLNFVPGVGI-FQCVSTGMTVTGK-------SFMGGNMEI-IVALNIT 116

Query: 146 ADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQV 205
           A  +L  +  +G P      C   + +V  ++  +    L ++ +K ++S L   +   +
Sbjct: 117 ATNRLLRDEETGLPVFKSEGCEVILVNVKTNLPSNM---LPKMVNKFLDSTLHKVLPGLM 173

Query: 206 CEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHH 265
           C  + ++V   +   +  L     +  +  + Y L++ PATTA  + +        +   
Sbjct: 174 CPAI-DAVLVYVNRKWTNLSDPMPVGQMGTVKYVLMSAPATTASYIQLDFSPVVQQQKGK 232

Query: 266 NPP-PFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRL 324
                 A   + FP  + +     L    F +A L   +     + ++D MI +      
Sbjct: 233 TIKLADAGEALTFPEGYAKGSSQLLLPATFLSAELALLQKS-FHVNIQDTMIGELPP--Q 289

Query: 325 TTKFFGTFLPEVAKKFPNMK-IQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSL 383
           TTK    F+PEVA  +P  K +   +    PP ++++      +    ++ FA    S  
Sbjct: 290 TTKTLARFIPEVAVAYPKSKPLTTQIKIKKPPKVTMKTGKSLLHLHSTLEMFAARWRSKA 349

Query: 384 A-SLFLIGMHTTGSMEVSAESNRLVGELKLDRLL-LELKHSNIGPFPVELLQDIMNYIVP 441
             SLFL+ +H    ++ S   N+L     LDRLL L  K S+IG F    L   +   + 
Sbjct: 350 PMSLFLLEVHFNLKVQYSVHENQLQMATSLDRLLSLSRKSSSIGNFNERELTGFITSYLE 409

Query: 442 ILVLPRVNEKLQKGFPLP 459
              +P VN+ LQ G PLP
Sbjct: 410 EAYIPVVNDVLQVGLPLP 427


>gi|32964823 antimicrobial peptide RYA3 [Homo sapiens]
          Length = 476

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 81/399 (20%), Positives = 163/399 (40%), Gaps = 34/399 (8%)

Query: 87  MDIREFQLPSSQISMVPNVGLKFSI-SNANIKISGKWKAQKRFLKMSGNFDLSIEGMSIS 145
           + I E  LP   + ++P  G++ S+ +   +  SG          + G   L+ E ++++
Sbjct: 95  LKIEELTLPKVLLKLLPGFGVQLSLHTKVGMHCSGP---------LGGLLQLAAE-VNVT 144

Query: 146 ADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQV 205
           + + L  + + G P +    CS+ +     HIS    G L       +E  L   +   +
Sbjct: 145 SRVALAVS-SRGTPILILKRCSTLLG----HISLFS-GLLPTPLFGVVEQMLFKVLPGLL 198

Query: 206 CEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMK-------GE 258
           C  V +SV   +      +  +  + ++  + + L   P  + + +++ +        G+
Sbjct: 199 CP-VVDSVLGVVNELLGAVLGLVSLGALGSVEFSLATLPLISNQYIELDINPIVKSVAGD 257

Query: 259 FYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPK 318
                    P   PP  +    H   V + L  Y FNT   + Q  G L M +  +++P 
Sbjct: 258 IIDFPKSRAPAKVPPKKD----HTSQVMVPL--YLFNTTFGLLQTNGALDMDITPELVP- 310

Query: 319 ESKFRLTTKFFGTFLPEVAKKFP-NMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAV 377
            S   LTT      LPE   K P + ++ + +     P +++           ++     
Sbjct: 311 -SDVPLTTTDLAALLPEALGKLPLHQQLLLFLRVREAPTVTLHNKKALVSLPANIHVLFY 369

Query: 378 LPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMN 437
           +P  +  SLF +    T   +++  + +L   L L+RL +++  S    F    L++ ++
Sbjct: 370 VPKGTPESLFELNSVMTVRAQLAPSATKLHISLSLERLSVKVASSFTHAFDGSRLEEWLS 429

Query: 438 YIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQN 476
           ++V  +  P++N  L  G PLP    +   N VL+  +N
Sbjct: 430 HVVGAVYAPKLNVALDVGIPLPKVLNINFSNSVLEIVEN 468


>gi|40807482 LPLUNC1 protein precursor [Homo sapiens]
          Length = 484

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 30/317 (9%)

Query: 156 SGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIES----ALRNKMNSQVCEKVTN 211
           SG   +  S C++   S+ + +   K+ +L+    K++ +    +L N + +Q+C  +  
Sbjct: 148 SGPTRLVLSDCATSHGSLRIQLLH-KLSFLVNALAKQVMNLLVPSLPNLVKNQLCPVIEA 206

Query: 212 SVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPF- 270
           S +       Q + V   + S+  + + L+ P A   +T+ + +  +           F 
Sbjct: 207 SFNGMYADLLQLVKVPISL-SIDRLEFDLLYP-AIKGDTIQLYLGAKLLDSQGKVTKWFN 264

Query: 271 -APPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLK----MTLRDDMIPKESKFRLT 325
            +   +  P   +    L +S      A      A VL     M L D ++P ES  RL 
Sbjct: 265 NSAASLTMPTLDNIPFSLIVSQDVVKAA-----VAAVLSPEEFMVLLDSVLP-ESAHRLK 318

Query: 326 TKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNS-SLA 384
           +   G    + A K  + +I   ++  TP     Q           +    V P+S +L 
Sbjct: 319 SSI-GLINEKAADKLGSTQIVKILTQDTPEFFIDQGHA----KVAQLIVLEVFPSSEALR 373

Query: 385 SLFLIGMHTTGSMEVSAESNRLV---GELKLDRLLLELKHSNIGPFPVELLQDIMNYIVP 441
            LF +G+  +   +   + ++L+     +  DR+  +L +S IG F  ++L++I+  I+ 
Sbjct: 374 PLFTLGIEASSEAQFYTKGDQLILNLNNISSDRI--QLMNSGIGWFQPDVLKNIITEIIH 431

Query: 442 ILVLPRVNEKLQKGFPL 458
            ++LP  N KL+ G P+
Sbjct: 432 SILLPNQNGKLRSGVPV 448


>gi|44681484 cell division cycle associated 2 [Homo sapiens]
          Length = 1023

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 138 SIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESAL 197
           +IE + +S  +    N +S   T++ +   S  N+ H  IS  KVG + +  ++      
Sbjct: 457 NIEPLQVSFAVLSSPNKSSISETLSGTDTFSSSNN-HEKISSPKVGRITRTSNR------ 509

Query: 198 RNKMNSQVCEKVTNSVSSELQP 219
           RN++ S V E V N +++E+QP
Sbjct: 510 RNQLVSVVEESVCNLLNTEVQP 531


>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
           b [Homo sapiens]
          Length = 882

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 18/104 (17%)

Query: 114 ANIKISGKWKAQKRFL-KMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINS 172
           AN K+  + + Q +++ K+SG  D          +    S+P + +P+   S   SH++S
Sbjct: 755 ANEKLGNQLREQVKYIAKLSGEKD---------REPTRASSPNTTRPS---SPSHSHLHS 802

Query: 173 VHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSE 216
           V VH+ +       +   K+IE       N+++C K      +E
Sbjct: 803 VMVHLQQEN-----KKLKKEIEEKKMKAENTRLCTKALGPSRTE 841


>gi|58761508 midnolin [Homo sapiens]
          Length = 468

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/46 (32%), Positives = 19/46 (41%)

Query: 206 CEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETL 251
           C +     + EL P  +  P+   I S  G  Y L  PP  T E L
Sbjct: 11  CRRGAPGGACELGPAAEAAPMSLAIHSTTGTRYDLAVPPDETVEGL 56


>gi|52145312 hypothetical protein LOC118611 [Homo sapiens]
          Length = 699

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 158 KPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSEL 217
           K   T    S H N + +HI     GW  +  H K+ S    +   +VC  V ++   E 
Sbjct: 388 KDHTTHCHASDHANQLSIHIP----GWSYRAVHTKVFSGSSKRQQGEVCMTV-SAPPVEQ 442

Query: 218 QPYFQTLPV 226
           +P    LP+
Sbjct: 443 KPTRHFLPI 451


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,089,076
Number of Sequences: 37866
Number of extensions: 784358
Number of successful extensions: 2035
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1999
Number of HSP's gapped (non-prelim): 18
length of query: 487
length of database: 18,247,518
effective HSP length: 106
effective length of query: 381
effective length of database: 14,233,722
effective search space: 5423048082
effective search space used: 5423048082
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press