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Search of human proteins with 110556638
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens]
(655 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens] 1378 0.0
gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens] 1359 0.0
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 33 0.64
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 33 0.64
gi|239753327 PREDICTED: zinc finger protein 806 [Homo sapiens] 33 1.1
gi|239747893 PREDICTED: zinc finger protein 806 [Homo sapiens] 33 1.1
gi|239741794 PREDICTED: zinc finger protein 806 [Homo sapiens] 33 1.1
gi|56682964 legumain preproprotein [Homo sapiens] 33 1.1
gi|56682962 legumain preproprotein [Homo sapiens] 33 1.1
gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo sapiens] 32 1.8
gi|40018646 hypothetical protein LOC55668 isoform 1 [Homo sapiens] 32 1.8
gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Hom... 31 3.2
gi|48762934 alpha 2 type I collagen [Homo sapiens] 30 5.4
gi|153251823 stromal protein associated with thymii and lymph no... 30 9.2
gi|211971038 tousled-like kinase 1 isoform 3 [Homo sapiens] 30 9.2
gi|211971036 tousled-like kinase 1 isoform 2 [Homo sapiens] 30 9.2
gi|33636698 tousled-like kinase 1 isoform 1 [Homo sapiens] 30 9.2
>gi|110556638 leishmanolysin-like isoform 2 [Homo sapiens]
Length = 655
Score = 1378 bits (3566), Expect = 0.0
Identities = 655/655 (100%), Positives = 655/655 (100%)
Query: 1 MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS 60
MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS
Sbjct: 1 MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS 60
Query: 61 SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF 120
SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF
Sbjct: 61 SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF 120
Query: 121 PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE 180
PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE
Sbjct: 121 PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE 180
Query: 181 HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN 240
HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN
Sbjct: 181 HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN 240
Query: 241 MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF 300
MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF
Sbjct: 241 MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF 300
Query: 301 ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV 360
ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV
Sbjct: 301 ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV 360
Query: 361 LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGRQMLSPYCD 420
LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGRQMLSPYCD
Sbjct: 361 LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGRQMLSPYCD 420
Query: 421 TLRSNPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADY 480
TLRSNPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADY
Sbjct: 421 TLRSNPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADY 480
Query: 481 CPFSQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERK 540
CPFSQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERK
Sbjct: 481 CPFSQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERK 540
Query: 541 LSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWD 600
LSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWD
Sbjct: 541 LSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWD 600
Query: 601 FCELCPPETDPPATNLTRALPLDLCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH 655
FCELCPPETDPPATNLTRALPLDLCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH
Sbjct: 601 FCELCPPETDPPATNLTRALPLDLCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH 655
>gi|223468600 leishmanolysin-like isoform 1 [Homo sapiens]
Length = 692
Score = 1359 bits (3518), Expect = 0.0
Identities = 655/692 (94%), Positives = 655/692 (94%), Gaps = 37/692 (5%)
Query: 1 MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS 60
MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS
Sbjct: 1 MVTTLGPKMAAEWGGGVGYSGSGPGRSRWRWSGSVWVRSVLLLLGGLRASATSTPVSLGS 60
Query: 61 SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF 120
SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF
Sbjct: 61 SPPCRHHVPSDTEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLF 120
Query: 121 PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE 180
PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE
Sbjct: 121 PQAISYLEKTFQVRRPAGTILLSRQCATNQYLRKENDPHRYCTGECAAHTKCGPVIVPEE 180
Query: 181 HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN 240
HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN
Sbjct: 181 HLQQCRVYRGGKWPHGAVGVPDQEGISDADFVLYVGALATERCSHENIISYAAYCQQEAN 240
Query: 241 MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF 300
MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF
Sbjct: 241 MDRPIAGYANLCPNMISTQPQEFVGMLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRF 300
Query: 301 ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV 360
ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV
Sbjct: 301 ADGLPPFNYSLGLYQWSDKVVRKVERLWDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPV 360
Query: 361 LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTG--------- 411
LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTG
Sbjct: 361 LEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDTGWYKANYSMA 420
Query: 412 ----------------------------RQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL 443
RQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL
Sbjct: 421 EKLDWGRGMGCDFVRKSCKFWIDQQRQKRQMLSPYCDTLRSNPLQLTCRQDQRAVAVCNL 480
Query: 444 QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI 503
QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI
Sbjct: 481 QKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRI 540
Query: 504 LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW 563
LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW
Sbjct: 541 LENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVW 600
Query: 564 VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD 623
VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD
Sbjct: 601 VQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLD 660
Query: 624 LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH 655
LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH
Sbjct: 661 LCSCSSSLVVTLWLLLGNLFPLLAGFLLCIWH 692
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 33.5 bits (75), Expect = 0.64
Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 11/116 (9%)
Query: 517 EKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAG- 575
++ P C EKCE L P W ++ +P V + LC G
Sbjct: 2121 QQENPSGNCRAADLRRAREKCEAALRAPVWAQCASRIDLTP----FLVDCANTLCEFGGL 2176
Query: 576 -QVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLDLCSCSSS 630
Q L ++Q G L P W CP E P ++ T LP SCS S
Sbjct: 2177 YQALCQALQAFGATCQSQGLKPPLWRNSSFCPLEC-PAYSSYTNCLP----SCSPS 2227
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 33.5 bits (75), Expect = 0.64
Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 11/116 (9%)
Query: 517 EKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAG- 575
++ P C EKCE L P W ++ +P V + LC G
Sbjct: 2121 QQENPSGNCRAADLRRAREKCEAALRAPVWAQCASRIDLTP----FLVDCANTLCEFGGL 2176
Query: 576 -QVLPVSIQMNGWIHDGNLLCPSCWDFCELCPPETDPPATNLTRALPLDLCSCSSS 630
Q L ++Q G L P W CP E P ++ T LP SCS S
Sbjct: 2177 YQALCQALQAFGATCQSQGLKPPLWRNSSFCPLEC-PAYSSYTNCLP----SCSPS 2227
>gi|239753327 PREDICTED: zinc finger protein 806 [Homo sapiens]
Length = 544
Score = 32.7 bits (73), Expect = 1.1
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 512 KNYGAEKYGPHSVCLIQKSAFVMEKC-----ERKLSYPDWGSGCYQVSCSPQGLKVWVQD 566
K+Y ++YG + + +S +++ C E + +W +GC Q S P+ KV D
Sbjct: 212 KSYKCDQYGKN----LSQSQYLIVHCKTHSGETPYEFHEWPTGCKQSSDLPRCQKVPSGD 267
Query: 567 TSYLCSRAGQ 576
Y C G+
Sbjct: 268 NPYKCKECGK 277
>gi|239747893 PREDICTED: zinc finger protein 806 [Homo sapiens]
Length = 589
Score = 32.7 bits (73), Expect = 1.1
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 512 KNYGAEKYGPHSVCLIQKSAFVMEKC-----ERKLSYPDWGSGCYQVSCSPQGLKVWVQD 566
K+Y ++YG + + +S +++ C E + +W +GC Q S P+ KV D
Sbjct: 257 KSYKCDQYGKN----LSQSQYLIVHCKTHSGETPYEFHEWPTGCKQSSDLPRCQKVPSGD 312
Query: 567 TSYLCSRAGQ 576
Y C G+
Sbjct: 313 NPYKCKECGK 322
>gi|239741794 PREDICTED: zinc finger protein 806 [Homo sapiens]
Length = 589
Score = 32.7 bits (73), Expect = 1.1
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 512 KNYGAEKYGPHSVCLIQKSAFVMEKC-----ERKLSYPDWGSGCYQVSCSPQGLKVWVQD 566
K+Y ++YG + + +S +++ C E + +W +GC Q S P+ KV D
Sbjct: 257 KSYKCDQYGKN----LSQSQYLIVHCKTHSGETPYEFHEWPTGCKQSSDLPRCQKVPSGD 312
Query: 567 TSYLCSRAGQ 576
Y C G+
Sbjct: 313 NPYKCKECGK 322
>gi|56682964 legumain preproprotein [Homo sapiens]
Length = 433
Score = 32.7 bits (73), Expect = 1.1
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 72 TEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAI 124
TE I + HL A H++++ V + + + + VE+LL E+ L + +P+A+
Sbjct: 332 TEEIQR-HLDARHLIEKSVRKIVSLLAASEAEVEQLLSERAPLTGHSCYPEAL 383
>gi|56682962 legumain preproprotein [Homo sapiens]
Length = 433
Score = 32.7 bits (73), Expect = 1.1
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 72 TEVINKVHLKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAI 124
TE I + HL A H++++ V + + + + VE+LL E+ L + +P+A+
Sbjct: 332 TEEIQR-HLDARHLIEKSVRKIVSLLAASEAEVEQLLSERAPLTGHSCYPEAL 383
>gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo sapiens]
Length = 477
Score = 32.0 bits (71), Expect = 1.8
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 18/94 (19%)
Query: 484 SQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSY 543
S++ SWH S + ++ CR L + ++ K +E V ++KL
Sbjct: 106 SKQHSWHESDSFTENAPCRPLRRRRKV-KRVTSE---------------VAASLQQKLKV 149
Query: 544 PDWG--SGCYQVSCSPQGLKVWVQDTSYLCSRAG 575
DW GC S Q L W ++T + S G
Sbjct: 150 SDWSYERGCRFKSAKKQRLSRWKENTPWTSSGHG 183
>gi|40018646 hypothetical protein LOC55668 isoform 1 [Homo sapiens]
Length = 482
Score = 32.0 bits (71), Expect = 1.8
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 18/94 (19%)
Query: 484 SQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSY 543
S++ SWH S + ++ CR L + ++ K +E V ++KL
Sbjct: 106 SKQHSWHESDSFTENAPCRPLRRRRKV-KRVTSE---------------VAASLQQKLKV 149
Query: 544 PDWG--SGCYQVSCSPQGLKVWVQDTSYLCSRAG 575
DW GC S Q L W ++T + S G
Sbjct: 150 SDWSYERGCRFKSAKKQRLSRWKENTPWTSSGHG 183
>gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Homo
sapiens]
Length = 251
Score = 31.2 bits (69), Expect = 3.2
Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 21/157 (13%)
Query: 497 RSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSY---------PDWG 547
RS R PEI + A+ G CL A ++ E L + W
Sbjct: 58 RSEGGRARWVMPEIPALWEADAGGSLEFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWA 117
Query: 548 SGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFCELCPP 607
+ C+ GL + SR LP + + W+ LL + C LC
Sbjct: 118 GQTLAILCAALGLGFIIS------SRTRSELPHLVSWHSWVGALTLLATAVQALCGLC-- 169
Query: 608 ETDPPATNLTRALPLDLCSCSSSLVV----TLWLLLG 640
P A ++R L L + LVV T+ +LLG
Sbjct: 170 LLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLG 206
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 30.4 bits (67), Expect = 5.4
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 19/99 (19%)
Query: 494 EYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQV 553
+Y+ + + L NQ E + P C + +LS+P+W SG Y +
Sbjct: 1132 DYEVDATLKSLNNQIETLLTPEGSRKNPARTCR-----------DLRLSHPEWSSGYYWI 1180
Query: 554 ----SCSPQGLKVWVQ-DTSYLCSRAGQVLPVSIQMNGW 587
C+ +KV+ T C RA P +I W
Sbjct: 1181 DPNQGCTMDAIKVYCDFSTGETCIRA---QPENIPAKNW 1216
>gi|153251823 stromal protein associated with thymii and lymph nodes
[Homo sapiens]
Length = 351
Score = 29.6 bits (65), Expect = 9.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 425 NPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGIPAEDLP 469
+P +T QD VC ++ FP PLP+ + GIP +P
Sbjct: 84 HPQHVTHIQDLTGKPVCVVRDFPAPLPESTVFSGCQMGIPTISVP 128
>gi|211971038 tousled-like kinase 1 isoform 3 [Homo sapiens]
Length = 670
Score = 29.6 bits (65), Expect = 9.2
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 80 LKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAISYLEKTFQVRRPAGT 139
L+AN ++R +DE ++ Y + + + + K L+ K + +S EK+ Q R G
Sbjct: 147 LRANCDLRRQIDEQQKLLEKYKERLNKCISMSKKLLIEKSTQEKLSSREKSMQDRLRLGH 206
Query: 140 ILLSRQCAT 148
R A+
Sbjct: 207 FTTVRHGAS 215
>gi|211971036 tousled-like kinase 1 isoform 2 [Homo sapiens]
Length = 718
Score = 29.6 bits (65), Expect = 9.2
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 80 LKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAISYLEKTFQVRRPAGT 139
L+AN ++R +DE ++ Y + + + + K L+ K + +S EK+ Q R G
Sbjct: 195 LRANCDLRRQIDEQQKLLEKYKERLNKCISMSKKLLIEKSTQEKLSSREKSMQDRLRLGH 254
Query: 140 ILLSRQCAT 148
R A+
Sbjct: 255 FTTVRHGAS 263
>gi|33636698 tousled-like kinase 1 isoform 1 [Homo sapiens]
Length = 766
Score = 29.6 bits (65), Expect = 9.2
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 80 LKANHVVKRDVDEHLRIKTVYDKSVEELLPEKKNLVKNKLFPQAISYLEKTFQVRRPAGT 139
L+AN ++R +DE ++ Y + + + + K L+ K + +S EK+ Q R G
Sbjct: 243 LRANCDLRRQIDEQQKLLEKYKERLNKCISMSKKLLIEKSTQEKLSSREKSMQDRLRLGH 302
Query: 140 ILLSRQCAT 148
R A+
Sbjct: 303 FTTVRHGAS 311
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,574,472
Number of Sequences: 37866
Number of extensions: 1392591
Number of successful extensions: 3505
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3494
Number of HSP's gapped (non-prelim): 20
length of query: 655
length of database: 18,247,518
effective HSP length: 109
effective length of query: 546
effective length of database: 14,120,124
effective search space: 7709587704
effective search space used: 7709587704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.