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Search of human proteins with 11037055
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11037055 sperm associated antigen 4 [Homo sapiens]
(437 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11037055 sperm associated antigen 4 [Homo sapiens] 886 0.0
gi|21361792 sperm associated antigen 4-like [Homo sapiens] 223 2e-58
gi|31742498 unc-84 homolog B [Homo sapiens] 160 2e-39
gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens] 155 7e-38
gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens] 155 7e-38
gi|195972890 unc-84 homolog A isoform a [Homo sapiens] 144 1e-34
gi|110227866 unc-84 homolog A isoform b [Homo sapiens] 144 1e-34
gi|239747614 PREDICTED: similar to Putative uncharacterized prot... 38 0.021
gi|239751037 PREDICTED: hypothetical protein [Homo sapiens] 37 0.035
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 37 0.046
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 37 0.046
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 37 0.046
gi|21264318 adenosine monophosphate deaminase 2 (isoform L) isof... 36 0.079
gi|169209545 PREDICTED: hypothetical protein [Homo sapiens] 35 0.10
gi|169210556 PREDICTED: hypothetical protein [Homo sapiens] 35 0.10
gi|169210041 PREDICTED: hypothetical protein [Homo sapiens] 35 0.10
gi|91982772 mucin 17 [Homo sapiens] 35 0.13
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 35 0.18
gi|110349786 Alstrom syndrome 1 [Homo sapiens] 34 0.23
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 34 0.23
gi|47078281 hypothetical protein LOC9679 [Homo sapiens] 34 0.23
gi|32479521 dishevelled 1 [Homo sapiens] 34 0.30
gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens] 34 0.30
gi|33286446 opioid growth factor receptor [Homo sapiens] 33 0.51
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 33 0.51
gi|239751012 PREDICTED: similar to hCG2041351 [Homo sapiens] 33 0.67
gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens] 33 0.67
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 33 0.67
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 33 0.67
gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens] 32 0.87
>gi|11037055 sperm associated antigen 4 [Homo sapiens]
Length = 437
Score = 886 bits (2290), Expect = 0.0
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 1 MRRSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEP 60
MRRSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEP
Sbjct: 1 MRRSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEP 60
Query: 61 ALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTL 120
ALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTL
Sbjct: 61 ALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTL 120
Query: 121 DLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSA 180
DLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSA
Sbjct: 121 DLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSA 180
Query: 181 FWLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSER 240
FWLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSER
Sbjct: 181 FWLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSER 240
Query: 241 VAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTV 300
VAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTV
Sbjct: 241 VAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTV 300
Query: 301 ILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFG 360
ILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFG
Sbjct: 301 ILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFG 360
Query: 361 LQVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRA 420
LQVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRA
Sbjct: 361 LQVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRA 420
Query: 421 HGVRTSEGAEGSAQGPH 437
HGVRTSEGAEGSAQGPH
Sbjct: 421 HGVRTSEGAEGSAQGPH 437
>gi|21361792 sperm associated antigen 4-like [Homo sapiens]
Length = 379
Score = 223 bits (569), Expect = 2e-58
Identities = 119/285 (41%), Positives = 174/285 (61%), Gaps = 11/285 (3%)
Query: 146 LLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSAFWLGLLYLVSPLE-------NEPKE 198
L + A VL + R + L +L L FW+ ++L S ++ N P +
Sbjct: 80 LRTQAQQVLFNTCRCKLLCQKLMEKTGILLLCAFGFWMFSIHLPSKMKVWQDDSINGPLQ 139
Query: 199 MLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSE-RVAKLVFQRLNEDFVRKP 257
L L Y E+VR ++Q L+ +++L ++ + A + E ++A+ + + ++ D++ KP
Sbjct: 140 SLRL--YQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKIMKMIHGDYIEKP 197
Query: 258 DYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHVFPGNCWAFEGD 317
D+AL S+GASID + TS Y +WN WNYA+PP VILEP+V PGNCWAFEGD
Sbjct: 198 DFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDVILEPNVTPGNCWAFEGD 257
Query: 318 QGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQVYDETEVSLGKFTFD 377
+GQV IQL +V LS++TLQH P ++ +G ++AP+DF ++G++ + EV LG F F
Sbjct: 258 RGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGMEGSPKEEVFLGAFQFQ 317
Query: 378 VEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHG 422
E + IQ F LQN P AF VK++I SNWG+P FTCLYRVR HG
Sbjct: 318 PE-NIIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVHG 361
>gi|31742498 unc-84 homolog B [Homo sapiens]
Length = 717
Score = 160 bits (405), Expect = 2e-39
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 212 QGQQLQQLQAELD-KLHKE-VSTVRAANSERVAKLVFQRLNEDFVRKPDYALSSVGASID 269
QG+ ++ A L L KE V V + K QR +ED + DYAL S GAS+
Sbjct: 500 QGKSAREAAASLSLTLQKEGVIGVTEEQVHHIVKQALQRYSEDRIGLADYALESGGASVI 559
Query: 270 LQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHVFPGNCWAFEGDQGQVVIQLPGRV 329
+ S Y + W +++ P VIL+P V PGNCWAF+G QG V++L R+
Sbjct: 560 STRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQGFAVVRLSARI 619
Query: 330 QLSDITLQHPPPSVEHTGGANSAPRDFAVFGL-QVYDETEVSLGKFTFDVEKSEIQTFHL 388
+ + +TL+H P ++ +SAP+DFA+FG + + LGKFT+D + IQTFH
Sbjct: 620 RPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHF 679
Query: 389 QNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHG 422
Q A + V+++IL+NWGHP +TC+YR R HG
Sbjct: 680 QAPTMATYQVVELRILTNWGHPEYTCIYRFRVHG 713
>gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens]
Length = 357
Score = 155 bits (392), Expect = 7e-38
Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 4/190 (2%)
Query: 237 NSERVAKLV---FQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWN 293
++E V+ LV ++L ED V DYAL S GASI TS Y + +W+ F N
Sbjct: 162 HTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLN 221
Query: 294 YARPPTVILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAP 353
+ PP +IL+P V+PG CWAF G QG +I+L ++ + +T++H V +G +SAP
Sbjct: 222 HEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAP 281
Query: 354 RDFAVFGL-QVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRF 412
++F+V+G+ + + E+ LG+F ++ + +QTF LQ+ VK+ I SNWGHP++
Sbjct: 282 KEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKY 341
Query: 413 TCLYRVRAHG 422
TCLYR R HG
Sbjct: 342 TCLYRFRVHG 351
>gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]
Length = 357
Score = 155 bits (392), Expect = 7e-38
Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 4/190 (2%)
Query: 237 NSERVAKLV---FQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWN 293
++E V+ LV ++L ED V DYAL S GASI TS Y + +W+ F N
Sbjct: 162 HTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHGIGFLN 221
Query: 294 YARPPTVILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAP 353
+ PP +IL+P V+PG CWAF G QG +I+L ++ + +T++H V +G +SAP
Sbjct: 222 HEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGNISSAP 281
Query: 354 RDFAVFGL-QVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRF 412
++F+V+G+ + + E+ LG+F ++ + +QTF LQ+ VK+ I SNWGHP++
Sbjct: 282 KEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNWGHPKY 341
Query: 413 TCLYRVRAHG 422
TCLYR R HG
Sbjct: 342 TCLYRFRVHG 351
>gi|195972890 unc-84 homolog A isoform a [Homo sapiens]
Length = 785
Score = 144 bits (364), Expect = 1e-34
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 2/194 (1%)
Query: 231 STVRAANSERVAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFS 290
S + A + + + ++D D+AL S G SI + S Y +
Sbjct: 588 SGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIP 647
Query: 291 FWNYARPPTVILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGAN 350
W +++ P V+++P ++PGNCWAF+G QG +V++L + + TL+H P ++ TG +
Sbjct: 648 LWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNIS 707
Query: 351 SAPRDFAVFGLQ-VYDETEVSLGKFTFDVEKSEIQTFH-LQNDPPAAFPKVKIQILSNWG 408
SAP+DFAV+GL+ Y E LG+FT+D + +Q F L+ AF V+++I SNWG
Sbjct: 708 SAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWG 767
Query: 409 HPRFTCLYRVRAHG 422
HP +TCLYR R HG
Sbjct: 768 HPEYTCLYRFRVHG 781
>gi|110227866 unc-84 homolog A isoform b [Homo sapiens]
Length = 702
Score = 144 bits (364), Expect = 1e-34
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 2/194 (1%)
Query: 231 STVRAANSERVAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFS 290
S + A + + + ++D D+AL S G SI + S Y +
Sbjct: 505 SGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIP 564
Query: 291 FWNYARPPTVILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGAN 350
W +++ P V+++P ++PGNCWAF+G QG +V++L + + TL+H P ++ TG +
Sbjct: 565 LWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNIS 624
Query: 351 SAPRDFAVFGLQ-VYDETEVSLGKFTFDVEKSEIQTFH-LQNDPPAAFPKVKIQILSNWG 408
SAP+DFAV+GL+ Y E LG+FT+D + +Q F L+ AF V+++I SNWG
Sbjct: 625 SAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWG 684
Query: 409 HPRFTCLYRVRAHG 422
HP +TCLYR R HG
Sbjct: 685 HPEYTCLYRFRVHG 698
>gi|239747614 PREDICTED: similar to Putative uncharacterized protein
FLJ44672 [Homo sapiens]
Length = 259
Score = 37.7 bits (86), Expect = 0.021
Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 7 PGSASSSRKHTPNFFSENSSMSI-TSEDSKGLRSAEPGPGEPEGRRARGPSCGEPALSAG 65
PGSA + R H + N S+ +S S GL +A GP PE +R PS G PA SAG
Sbjct: 92 PGSAPALRWHLQ---APNGLRSVGSSRPSLGLLAASAGPNRPEVGLSR-PSLGLPAASAG 147
Query: 66 V--PGGTTWAGSSQQK---PAPRSHNWQTACGAATVRGGASEPTGS--PVVS 110
P G +Q+ P P S + GA R S P+ S PV S
Sbjct: 148 PSHPQIGLELGLEEQQVGLPGPNSVLSAASPGAKLPRVSLSRPSSSCLPVAS 199
>gi|239751037 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 37.0 bits (84), Expect = 0.035
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 43 GPGEPEGRRARGPSC----GEPALSAGVPGGTTWAGSSQQKPAP--RSHNWQTACGAATV 96
G G P+G + PSC G S G G + AGSS PAP + W C ++
Sbjct: 47 GEGPPQGNLS--PSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSL 104
Query: 97 RGGASEPTGSP 107
A PTGSP
Sbjct: 105 LQAAGGPTGSP 115
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 36.6 bits (83), Expect = 0.046
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 42 PGPGEPEGRRARGPSCGEPALSAGVPG--GTTWAGSSQQKPAPRS 84
PGPG P R R G P SAG G G+ WA + + PAP S
Sbjct: 227 PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSS 271
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 36.6 bits (83), Expect = 0.046
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 42 PGPGEPEGRRARGPSCGEPALSAGVPG--GTTWAGSSQQKPAPRS 84
PGPG P R R G P SAG G G+ WA + + PAP S
Sbjct: 227 PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSS 271
>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
Length = 321
Score = 36.6 bits (83), Expect = 0.046
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 42 PGPGEPEGRRARGPSCGEPALSAGVPG--GTTWAGSSQQKPAPRS 84
PGPG P R R G P SAG G G+ WA + + PAP S
Sbjct: 227 PGPGPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSS 271
>gi|21264318 adenosine monophosphate deaminase 2 (isoform L) isoform
1 [Homo sapiens]
Length = 879
Score = 35.8 bits (81), Expect = 0.079
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 24 NSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEPALSAGVPGGTTW-AGSSQQK--- 79
+ S+ + + KGL AEPGP R R S PA++A VP ++ +GS + K
Sbjct: 18 HQSLPLGAGRRKGLDVAEPGPS-----RCRSDS---PAVAAVVPAMASYPSGSGKPKAKY 69
Query: 80 PAPRSHNWQTACGAATVRGG---------ASEPTGSPVVSEEPLDLLPTLD 121
P + + Q + A RGG S P +P + PLDL ++D
Sbjct: 70 PFKKRASLQASTAAPEARGGLGAPPLQSARSLPGPAPCLKHFPLDLRTSMD 120
>gi|169209545 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.10
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 43 GPGEPEGRRARGPSC----GEPALSAGVPGGTTWAGSSQQKPAP--RSHNWQTACGAATV 96
G G P+G + PSC G S G G + AGSS PAP + W C ++
Sbjct: 53 GEGPPQGNLS--PSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSL 110
Query: 97 RGGASEPTGSP 107
A P GSP
Sbjct: 111 LQAAGGPAGSP 121
>gi|169210556 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.10
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 43 GPGEPEGRRARGPSC----GEPALSAGVPGGTTWAGSSQQKPAP--RSHNWQTACGAATV 96
G G P+G + PSC G S G G + AGSS PAP + W C ++
Sbjct: 53 GEGPPQGNLS--PSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSL 110
Query: 97 RGGASEPTGSP 107
A P GSP
Sbjct: 111 LQAAGGPAGSP 121
>gi|169210041 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.10
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 43 GPGEPEGRRARGPSC----GEPALSAGVPGGTTWAGSSQQKPAP--RSHNWQTACGAATV 96
G G P+G + PSC G S G G + AGSS PAP + W C ++
Sbjct: 53 GEGPPQGNLS--PSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSL 110
Query: 97 RGGASEPTGSP 107
A P GSP
Sbjct: 111 LQAAGGPAGSP 121
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 35.0 bits (79), Expect = 0.13
Identities = 36/122 (29%), Positives = 49/122 (40%), Gaps = 15/122 (12%)
Query: 11 SSSRKHTPNFFSENSSMSITSEDSKG------LRSAEPGPGEPEGRRARGPSCGEPALSA 64
S+ HT SE S++S T DS S+ P P E PS G AL++
Sbjct: 1812 STPVSHTLVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIATSTPSEGSTALTS 1871
Query: 65 GVPGGTTWAGSSQQK-----PAPRSH---NWQTACGAATVRGGASEPTGSPVVSEEPLDL 116
+P TT SS+ PA S + + T G+S PT +P PL
Sbjct: 1872 -IPVSTTTVASSETNTLSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTPREGRPPLTS 1930
Query: 117 LP 118
+P
Sbjct: 1931 IP 1932
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 34.7 bits (78), Expect = 0.18
Identities = 40/134 (29%), Positives = 55/134 (41%), Gaps = 30/134 (22%)
Query: 2 RRSSRPGSASSSRKH--------TPNFFSENSSMSITSEDSKGLRSAEPGPG-EPEGRRA 52
RR SR SAS+ R+ P S + S + +S DS R A PGPG EP R
Sbjct: 393 RRRSR-SSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGA-PGPGPEPGSERG 450
Query: 53 RG---------PSCGEPALSAGVPGGTTWAG-----SSQQKPAPRSHNWQTACGAATVRG 98
G P PA ++ PG G SS + P P +W ++ + R
Sbjct: 451 HGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRS 510
Query: 99 GASE-----PTGSP 107
++E P+ SP
Sbjct: 511 RSAEKRPHSPSRSP 524
>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
Length = 4169
Score = 34.3 bits (77), Expect = 0.23
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 9 SASSSRKHTPN---FFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEPALSAG 65
+++S +HT F+ ++ S +E++K + SA PGPG+ + G P L +
Sbjct: 1378 TSTSYSQHTEKPSIFYQQSLPGSHLTEEAKNV-SAVPGPGDRK--------TGIPTLPST 1428
Query: 66 VPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVS 110
T GS Q+ P SH + A + G + G+P V+
Sbjct: 1429 FYSHTEKPGSFYQQVLPHSHLPEEALEVSVAPGPVDQTIGTPTVT 1473
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 34.3 bits (77), Expect = 0.23
Identities = 69/293 (23%), Positives = 109/293 (37%), Gaps = 41/293 (13%)
Query: 4 SSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARG-------PS 56
SS S+SSS + + S +SS S T EDS E P G A+
Sbjct: 2647 SSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQ 2706
Query: 57 CGEPALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAAT-----VRGGASEPTGSPVVSE 111
G+ SA PG T A Q P + Q A R G PT +
Sbjct: 2707 AGKARPSAHSPGKKTPAPQPQAPPPQPTQPLQPKAQAGAKSRPKKREGVHLPTTKELAKR 2766
Query: 112 EPLDLLPTLDLRQE----MPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFL 167
+ LP+++ R + +P +++K F + + G Y+ + + +
Sbjct: 2767 Q---RLPSVENRPKIAAFLPARQLWK-----WFGKPTQRRGMKGKARKLFYKAIVRGKEM 2818
Query: 168 FTAVSLLSLFLSAFWLGLLY---LVSPLENEPKEMLTLSE--YHERVRSQGQQLQQLQAE 222
+ ++FLSA L Y + S E+ M+ + YH S G+Q Q Q
Sbjct: 2819 I-RIGDCAVFLSAGRPNLPYIGRIQSMWESWGNNMVVRVKWFYHPEETSPGKQFHQGQHW 2877
Query: 223 LDKLHKEVSTVRAANSERVAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSH 275
K + + +S+R +DF+ + Y S V + D+Q SH
Sbjct: 2878 DQKSSRSLPAALRVSSQR----------KDFMERALYQSSHVDEN-DVQTVSH 2919
Score = 28.9 bits (63), Expect = 9.6
Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 11/132 (8%)
Query: 3 RSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEPAL 62
R++ P S+SSS + + S +SS S +S S S+ + S +
Sbjct: 2608 RAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2667
Query: 63 SAGVPGGTTWAGSSQQKPAPRSHNWQTACGA----ATVRGGASEPTGSPVVSEEPLDLLP 118
S+ + SS + AP +A A AT + G + P+ + P
Sbjct: 2668 SSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAP--- 2724
Query: 119 TLDLRQEMPPPR 130
+ + PPP+
Sbjct: 2725 ----QPQAPPPQ 2732
>gi|47078281 hypothetical protein LOC9679 [Homo sapiens]
Length = 422
Score = 34.3 bits (77), Expect = 0.23
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 3 RSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEPAL 62
+ RP + FS S +S +ED GP P R L
Sbjct: 289 QEQRPSLDLAKMAQNCQTFSSLSCLSAGTEDC--------GPQSPFARHVSNTRAWTALL 340
Query: 63 SAGVPGGTTWAGSSQQKPAPRSHNWQTAC 91
SA PGG T AG+ +P P S + AC
Sbjct: 341 SASGPGGRTPAGTPVPEPLPPSFDDHLAC 369
>gi|32479521 dishevelled 1 [Homo sapiens]
Length = 670
Score = 33.9 bits (76), Expect = 0.30
Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 22 SENSSMSITSEDSKGLRSAEPGPGEPEGRRARGP--SCGEPALSAGVPGGTTW----AGS 75
S S S S+ S RS+ PG + RRA G S E +A G++W AG
Sbjct: 539 STGSQQSEGSKSSGSTRSSRRAPGREKERRAAGAGGSGSESDHTAPSGVGSSWRERPAGQ 598
Query: 76 SQQKPAPRSHNWQTACG---------AATVRGGASEPTGSPVVSE 111
+ +PRS TA G A TV GG P G P V E
Sbjct: 599 LSRGSSPRSQASATAPGLPPPHPTTKAYTVVGG---PPGGPPVRE 640
>gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens]
Length = 644
Score = 33.9 bits (76), Expect = 0.30
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 12/81 (14%)
Query: 34 SKGLRSAEPGPGEPEGRRARGPSCG-EPALSAGVPGGTTWAGSSQQKPAPRSHNWQTACG 92
++ LR +EP P PEGR +G G PA AG P AP S + AC
Sbjct: 5 AENLRPSEPAPQPPEGRTLQGQLPGAPPAQRAGSP-----------PDAPGSESPALACS 53
Query: 93 AATVRGGASEPTGSPVVSEEP 113
G P + ++ P
Sbjct: 54 TPATPSGEDPPARAAPIAPRP 74
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 33.1 bits (74), Expect = 0.51
Identities = 36/132 (27%), Positives = 49/132 (37%), Gaps = 11/132 (8%)
Query: 3 RSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPG-------PGEPEGRRARGP 55
+ PGS S + +P + + SE + G R A P P E G R GP
Sbjct: 511 KEGTPGSPSETPGPSPAGPAGDEPAESPSE-TPGPRPAGPAGDEPAESPSETPGPRPAGP 569
Query: 56 SCGEPALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLD 115
+ EPA S G + AG ++ +PA + G EP SP + P
Sbjct: 570 AGDEPAESPSETPGPSPAGPTRDEPA---ESPSETPGPRPAGPAGDEPAESPSETPGPRP 626
Query: 116 LLPTLDLRQEMP 127
P D E P
Sbjct: 627 AGPAGDEPAESP 638
Score = 32.7 bits (73), Expect = 0.67
Identities = 29/98 (29%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 31 SEDSKGLRSAEPG-PGEPEGRRARGPSCGEPALSAGVPGGTTWAGSSQQKPAPRSHNWQT 89
+E G + PG P E G GP+ EPA S G AG + +PA +
Sbjct: 504 TEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPA---ESPSE 560
Query: 90 ACGAATVRGGASEPTGSPVVSEEPLDLLPTLDLRQEMP 127
G EP SP + P PT D E P
Sbjct: 561 TPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESP 598
Score = 28.9 bits (63), Expect = 9.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 44 PGEPEGRRARGPSCGEPALSAGVPGGTTWAGSSQQKPA 81
P E G R GP+ EPA S G + AG ++ +PA
Sbjct: 618 PSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPA 655
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 33.1 bits (74), Expect = 0.51
Identities = 35/131 (26%), Positives = 48/131 (36%), Gaps = 15/131 (11%)
Query: 10 ASSSRKHTPNFFSENSSMSITSEDSKGLRS--------AEPGPGEPEGRRARG--PSCGE 59
A SS + S+ S S+ S +G R P PG+PEGR +G S G
Sbjct: 12 ALSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGP 71
Query: 60 PALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPT 119
P G G+ Q P PR + G ++ G P +P P
Sbjct: 72 PPRPGKPEGPPPQGGNQSQGPPPRPGKPE-----GQPPQGGNQSQGPPPRPGKPEGPPPQ 126
Query: 120 LDLRQEMPPPR 130
+ + PPPR
Sbjct: 127 GGNQSQGPPPR 137
>gi|239751012 PREDICTED: similar to hCG2041351 [Homo sapiens]
Length = 186
Score = 32.7 bits (73), Expect = 0.67
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 24/93 (25%)
Query: 38 RSAEPGPGEPEGRRARGPSCGEPALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAAT-V 96
R EPGP RGP G+ L G PG G+ +Q+ + Q CGA T +
Sbjct: 28 RQVEPGP--------RGPGMGQQPLQPGSPG----RGAGRQRASR-----QPPCGALTSL 70
Query: 97 RGGASEPTGSPVVSEEPLDLLPTLDLRQEMPPP 129
+ +P GS S L L +PPP
Sbjct: 71 QAAPQQPPGSAHTS------LQGSPLALHLPPP 97
>gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens]
Length = 578
Score = 32.7 bits (73), Expect = 0.67
Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 24/155 (15%)
Query: 2 RRSSRPGSASSSRKHTPNFFSENSSMSITSEDS------KGL------RSAEPGPGEPEG 49
R+SS P S SSS TP SS+ + S +G+ R++ P E +G
Sbjct: 252 RKSSEPWSESSSPATTPQDGPSASSLWLLEPASYHVVPIRGVPGQWQGRTSAPATPEIQG 311
Query: 50 RRARGPSCGEPALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAAT-------VRGGASE 102
RR + S + AG P G + +++P + +C AT SE
Sbjct: 312 RRGQSQSLRVDSFRAG-PEGRGRSAFPRRRPTHYTVTVPDSCFPATKPPLPHAACHSCSE 370
Query: 103 PTGSPVVS----EEPLDLLPTLDLRQEMPPPRVFK 133
+GS V S P P + Q + PP+ +
Sbjct: 371 DSGSDVSSISHPTSPGSSSPDISFLQPLSPPKTHR 405
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens]
Length = 663
Score = 32.7 bits (73), Expect = 0.67
Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 24/155 (15%)
Query: 2 RRSSRPGSASSSRKHTPNFFSENSSMSITSEDS------KGL------RSAEPGPGEPEG 49
R+SS P S SSS TP SS+ + S +G+ R++ P E +G
Sbjct: 337 RKSSEPWSESSSPATTPQDGPSASSLWLLEPASYHVVPIRGVPGQWQGRTSAPATPEIQG 396
Query: 50 RRARGPSCGEPALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAAT-------VRGGASE 102
RR + S + AG P G + +++P + +C AT SE
Sbjct: 397 RRGQSQSLRVDSFRAG-PEGRGRSAFPRRRPTHYTVTVPDSCFPATKPPLPHAACHSCSE 455
Query: 103 PTGSPVVS----EEPLDLLPTLDLRQEMPPPRVFK 133
+GS V S P P + Q + PP+ +
Sbjct: 456 DSGSDVSSISHPTSPGSSSPDISFLQPLSPPKTHR 490
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 32.7 bits (73), Expect = 0.67
Identities = 31/125 (24%), Positives = 43/125 (34%), Gaps = 7/125 (5%)
Query: 9 SASSSRKHTPNFFSENSSMSITSEDS---KGLRSAEPGPGEPEGRRARGPSCGEPALSAG 65
S +S HT FS S++S +S S P P P R P+ PA +
Sbjct: 1080 SKQTSVLHTSRSFSSGLHHSLSSSESLPGSPTHSLSPSPTTP----CRSPAPDVPADTTA 1135
Query: 66 VPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTLDLRQE 125
P + + SS PA H ++ + G P S + P
Sbjct: 1136 SPPSASPSSSSPASPAAAGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPPSPLACPPIS 1195
Query: 126 MPPPR 130
PPPR
Sbjct: 1196 APPPR 1200
>gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens]
Length = 1294
Score = 32.3 bits (72), Expect = 0.87
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 194 NEPKEMLT-LSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSERVAKLVFQRLNED 252
N+P +++ +YH + ++ +Q +L +++ LH V + + ++V + VF + +D
Sbjct: 247 NDPTDLIKHFRKYHLGLHNRTRQDAELDSKILALHNMVQFSHSKDFQKVNRSVFSGVLQD 306
Query: 253 F-VRKP-------DYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEP 304
+P D ++S G I + + + D NT YF +F + Y + LE
Sbjct: 307 INSSRPVLLNGTYDVQVTSGGTFIGIGRKTPD-CQGNTKYFRCKFCNFTYMGNSSTELEQ 365
Query: 305 H 305
H
Sbjct: 366 H 366
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,265,578
Number of Sequences: 37866
Number of extensions: 995383
Number of successful extensions: 4984
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 158
Number of HSP's that attempted gapping in prelim test: 4807
Number of HSP's gapped (non-prelim): 335
length of query: 437
length of database: 18,247,518
effective HSP length: 105
effective length of query: 332
effective length of database: 14,271,588
effective search space: 4738167216
effective search space used: 4738167216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.