C3orf55 5373

Name: C3orf55	Sequence: fasta or formatted (118aa)		NCBI GI: 153791811
Description: hypothetical protein LOC152078 isoform 3		Not currently referenced in the text
Other entries for this name: alt prot {133aa} hypothetical protein LOC152078 isoform 2 alt prot {135aa} hypothetical protein LOC152078 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 4 1 C cysteine 4.2 5 2 D aspartate 5.9 7 1 E glutamate 4.2 5 2 F phenylalanine 5.9 7 1 G glycine 5.9 7 2 H histidine 2.5 3 1 I isoleucine 5.9 7 2 K lysine 5.9 7 3 L leucine 11.0 13 1 M methionine 2.5 3 1 N asparagine 6.8 8 1 P proline 1.7 2 1 Q glutamine 4.2 5 1 R arginine 5.1 6 1 S serine 5.9 7 2 T threonine 6.8 8 1 V valine 5.9 7 2 W tryptophan 1.7 2 1 Y tyrosine 4.2 5 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC152078 isoform 3 C3orf55 0.812 hypothetical protein LOC152078 isoform 1 C3orf55 0.562 hypothetical protein LOC152078 isoform 2 PQLC2 0.192 PQ loop repeat containing 2 isoform 1 PQLC2 0.192 PQ loop repeat containing 2 isoform 1 PQLC2 0.156 PQ loop repeat containing 2 isoform 2 SCN7A 0.013 sodium channel, voltage-gated, type VII, alpha [Hom... EFCAB1 0.009 EF-hand calcium binding domain 1 isoform b EFCAB1 0.009 EF-hand calcium binding domain 1 isoform a ARRB1 0.004 arrestin beta 1 isoform A ARRB1 0.004 arrestin beta 1 isoform B NTSR1 0.004 neurotensin receptor 1 RABEP1 0.004 rabaptin, RAB GTPase binding effector protein 1 iso... RABEP1 0.004 rabaptin, RAB GTPase binding effector protein 1 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.