Guide to the Human Genome
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Name: IDO2 Sequence: fasta or formatted (420aa) NCBI GI: 148539554
Description:

indoleamine-pyrrole 2,3 dioxygenase-like 1

Referenced in:

Amino Acid Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         32           3
 C cysteine            0.5          2           1
 D aspartate           5.0         21           1
 E glutamate           5.7         24           2
 F phenylalanine       3.6         15           1
 G glycine             6.4         27           2
 H histidine           5.0         21           1
 I isoleucine          5.5         23           2
 K lysine              5.2         22           2
 L leucine            13.3         56           2
 M methionine          2.9         12           1
 N asparagine          2.9         12           1
 P proline             6.9         29           2
 Q glutamine           4.8         20           1
 R arginine            4.0         17           1
 S serine              6.7         28           2
 T threonine           4.3         18           1
 V valine              5.0         21           1
 W tryptophan          1.0          4           1
 Y tyrosine            3.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   indoleamine-pyrrole 2,3 dioxygenase-like 1 
IDO1                  0.378   indoleamine 2,3-dioxygenase 1 
ATP11A                0.018   ATPase, class VI, type 11A isoform b 
ATP11A                0.018   ATPase, class VI, type 11A isoform a 
ESR2                  0.007   estrogen receptor beta isoform 2 
ESR2                  0.007   estrogen receptor beta isoform 2 
ESR2                  0.007   estrogen receptor beta isoform 1 
HPD                   0.006   4-hydroxyphenylpyruvate dioxygenase 
HPS3                  0.005   Hermansky-Pudlak syndrome 3 protein 
LOC100291460          0.005   PREDICTED: hypothetical protein XP_002347393 
LOC100287897          0.005   PREDICTED: hypothetical protein XP_002343256 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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