HMGCS1 4436

Name: HMGCS1	Sequence: fasta or formatted (520aa)		NCBI GI: 148298677
Description: hydroxymethylglutaryl-CoA synthase 1		Referenced in: Cholesterol Biosynthesis Fatty Acid Oxidation and Ketone Bodies
Other entries for this name: alt mRNA [520aa] hydroxymethylglutaryl-CoA synthase 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 44 2 C cysteine 1.9 10 1 D aspartate 7.1 37 2 E glutamate 5.4 28 2 F phenylalanine 3.5 18 1 G glycine 7.7 40 2 H histidine 1.9 10 2 I isoleucine 4.8 25 2 K lysine 5.6 29 2 L leucine 9.2 48 2 M methionine 2.3 12 1 N asparagine 5.0 26 2 P proline 4.0 21 1 Q glutamine 3.5 18 2 R arginine 4.0 21 2 S serine 7.7 40 3 T threonine 5.6 29 2 V valine 6.5 34 2 W tryptophan 1.0 5 1 Y tyrosine 4.8 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hydroxymethylglutaryl-CoA synthase 1 HMGCS1 1.000 hydroxymethylglutaryl-CoA synthase 1 HMGCS2 0.623 hydroxymethylglutaryl-CoA synthase 2 FAT1 0.005 FAT tumor suppressor 1 precursor C6orf204 0.005 chromosome 6 open reading frame 204 isoform a [Homo... ZBBX 0.005 zinc finger, B-box domain containing C6orf204 0.005 chromosome 6 open reading frame 204 isoform b [Homo... RPAP2 0.004 RNA polymerase II associated protein 2 NFAT5 0.004 nuclear factor of activated T-cells 5 isoform a [Hom... NFAT5 0.004 nuclear factor of activated T-cells 5 isoform c [Homo... NFAT5 0.004 nuclear factor of activated T-cells 5 isoform d [Ho... NFAT5 0.004 nuclear factor of activated T-cells 5 isoform b [Ho... NFAT5 0.004 nuclear factor of activated T-cells 5 isoform a [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.