Search of human proteins with 146198640

Search of human proteins with 146198640

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|146198640 glycerophosphodiester phosphodiesterase domain
containing 3 [Homo sapiens]
         (318 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|146198640 glycerophosphodiester phosphodiesterase domain cont...   647   0.0  
gi|32698962 glycerophosphodiester phosphodiesterase domain conta...   261   4e-70
gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens]    44   2e-04
gi|25901062 hypothetical protein LOC56261 [Homo sapiens]               34   0.20 
gi|33457301 glycerophosphodiester phosphodiesterase domain conta...    31   1.7  
gi|21361649 osteoblast differentiation promoting factor protein ...    30   2.2  
gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     30   2.8  
gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     30   2.8  
gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     30   2.8  
gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]     30   2.8  
gi|21361633 leucine rich repeat containing 40 [Homo sapiens]           30   3.7  
gi|189217917 FYVE, RhoGEF and PH domain containing 2 [Homo sapiens]    29   6.3  
gi|4501951 adenosine A2b receptor [Homo sapiens]                       28   8.2  

>gi|146198640 glycerophosphodiester phosphodiesterase domain
           containing 3 [Homo sapiens]
          Length = 318

 Score =  647 bits (1668), Expect = 0.0
 Identities = 318/318 (100%), Positives = 318/318 (100%)

Query: 1   MSLLLYYALPALGSYAMLSIFFLRRPHLLHTPRAPTFRIRLGAHRGGSGELLENTMEAME 60
           MSLLLYYALPALGSYAMLSIFFLRRPHLLHTPRAPTFRIRLGAHRGGSGELLENTMEAME
Sbjct: 1   MSLLLYYALPALGSYAMLSIFFLRRPHLLHTPRAPTFRIRLGAHRGGSGELLENTMEAME 60

Query: 61  NSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGSLDFEDLPLYKEKLEVYFS 120
           NSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGSLDFEDLPLYKEKLEVYFS
Sbjct: 61  NSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGSLDFEDLPLYKEKLEVYFS 120

Query: 121 PGHFAHGSDRRMVRLEDLFQRFPRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASE 180
           PGHFAHGSDRRMVRLEDLFQRFPRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASE
Sbjct: 121 PGHFAHGSDRRMVRLEDLFQRFPRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASE 180

Query: 181 KSSVMKKCKAANPEMPLSFTISRGFWVLLSYYLGLLPFIPIPEKFFFCFLPNIINRTYFP 240
           KSSVMKKCKAANPEMPLSFTISRGFWVLLSYYLGLLPFIPIPEKFFFCFLPNIINRTYFP
Sbjct: 181 KSSVMKKCKAANPEMPLSFTISRGFWVLLSYYLGLLPFIPIPEKFFFCFLPNIINRTYFP 240

Query: 241 FSCSCLNQLLAVVSKWLIMRKSLIRHLEERGVQVVFWCLNEESDFEAAFSVGATGVITDY 300
           FSCSCLNQLLAVVSKWLIMRKSLIRHLEERGVQVVFWCLNEESDFEAAFSVGATGVITDY
Sbjct: 241 FSCSCLNQLLAVVSKWLIMRKSLIRHLEERGVQVVFWCLNEESDFEAAFSVGATGVITDY 300

Query: 301 PTALRHYLDNHGPAARTS 318
           PTALRHYLDNHGPAARTS
Sbjct: 301 PTALRHYLDNHGPAARTS 318


>gi|32698962 glycerophosphodiester phosphodiesterase domain
           containing 1 [Homo sapiens]
          Length = 314

 Score =  261 bits (668), Expect = 4e-70
 Identities = 130/309 (42%), Positives = 197/309 (63%)

Query: 2   SLLLYYALPALGSYAMLSIFFLRRPHLLHTPRAPTFRIRLGAHRGGSGELLENTMEAMEN 61
           S   +Y L  LG Y + S   L+ P LLH  +   F  +  +HRGG+GE LENTM A ++
Sbjct: 3   STAAFYLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGAGENLENTMAAFQH 62

Query: 62  SMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGSLDFEDLPLYKEKLEVYFSP 121
           ++   +D LELDC +T+D  VVVSHDENL R +G+N ++  L + +LP Y  KL+V F  
Sbjct: 63  AVKIGTDTLELDCHITKDEQVVVSHDENLKRATGVNVNISDLKYCELPPYLGKLDVSFQR 122

Query: 122 GHFAHGSDRRMVRLEDLFQRFPRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASEK 181
                G D R+  L+++F+ FP TP++++IK  N  LI++++ LV+RY+R  +T+W +  
Sbjct: 123 ACQCEGKDNRIPLLKEVFEAFPNTPINIDIKVNNNVLIKKVSELVKRYNREHLTVWGNAN 182

Query: 182 SSVMKKCKAANPEMPLSFTISRGFWVLLSYYLGLLPFIPIPEKFFFCFLPNIINRTYFPF 241
             +++KC   N ++P+ F++ R   +L  ++ GLLPF+PI E+FF   +P+II +   P 
Sbjct: 183 YEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPH 242

Query: 242 SCSCLNQLLAVVSKWLIMRKSLIRHLEERGVQVVFWCLNEESDFEAAFSVGATGVITDYP 301
           + S   + L  +S  L+MRK+L  HL  RG+QV  W LNEE +++ AF +GATGV+TDYP
Sbjct: 243 TMSRSQKFLIWLSDLLLMRKALFDHLTARGIQVYIWVLNEEQEYKRAFDLGATGVMTDYP 302

Query: 302 TALRHYLDN 310
           T LR +L N
Sbjct: 303 TKLRDFLHN 311


>gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens]
          Length = 331

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 38/74 (51%)

Query: 35  PTFRIRLGAHRGGSGELLENTMEAMENSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQS 94
           P  RI   AHRGGS +  ENT+ A+  +    +  +ELD + T D + V+ HD  + R +
Sbjct: 61  PRDRISAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEFTSDGIPVLMHDNTVDRTT 120

Query: 95  GLNRDVGSLDFEDL 108
                +  L FE +
Sbjct: 121 DGTGRLCDLTFEQI 134


>gi|25901062 hypothetical protein LOC56261 [Homo sapiens]
          Length = 672

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 16/58 (27%), Positives = 30/58 (51%)

Query: 53  ENTMEAMENSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGSLDFEDLPL 110
           ENT+ ++ N+ +  +  +E D  L++D V VV HD   C       D   ++  ++P+
Sbjct: 340 ENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPV 397


>gi|33457301 glycerophosphodiester phosphodiesterase domain
           containing 4 [Homo sapiens]
          Length = 520

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 44  HRGGSGELLENTMEAMENSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGL 96
           HRG      ENTM + E ++   +  LE D  L+ D V  + HD +L R + +
Sbjct: 203 HRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFDLKRTTNI 255


>gi|21361649 osteoblast differentiation promoting factor protein
           [Homo sapiens]
          Length = 539

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 41  LGAHRGGSGELLENTMEAMENSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGL 96
           L  HRG      ENT+ ++  +    + + E D  ++ D V  + HDE+L R + +
Sbjct: 226 LVGHRGAPMLAPENTLMSLRKTAECGATVFETDVMVSSDGVPFLMHDEHLSRTTNV 281


>gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 143 PRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASEKSSVMKKCKAANPEMPLS 198
           PRTP  + ++G  E+    ++   +  DR E    + EKS+ +KK   + P++P+S
Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK---SQPDLPIS 163


>gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 143 PRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASEKSSVMKKCKAANPEMPLS 198
           PRTP  + ++G  E+    ++   +  DR E    + EKS+ +KK   + P++P+S
Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK---SQPDLPIS 163


>gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 143 PRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASEKSSVMKKCKAANPEMPLS 198
           PRTP  + ++G  E+    ++   +  DR E    + EKS+ +KK   + P++P+S
Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK---SQPDLPIS 163


>gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]
          Length = 339

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 143 PRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASEKSSVMKKCKAANPEMPLS 198
           PRTP  + ++G  E+    ++   +  DR E    + EKS+ +KK   + P++P+S
Sbjct: 173 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK---SQPDLPIS 225


>gi|21361633 leucine rich repeat containing 40 [Homo sapiens]
          Length = 602

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 13/136 (9%)

Query: 2   SLLLYYALPALGSYAMLSIFFLRRPHLLHTPRAPTFRIRLGAHRGGSGELLENTMEAME- 60
           S LL    P L     L + +LRR  L   P  P+  +    H G      EN +E +E 
Sbjct: 229 SNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVG------ENQIEMLEA 282

Query: 61  NSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGSLDFEDLPLYKEKLEVYFS 120
             +   + +L LD    RD  +    DE +  +S    D+ + D   LP     L + F 
Sbjct: 283 EHLKHLNSILVLD---LRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLHLKFL 339

Query: 121 PGHFAHGSDRRMVRLE 136
                 G+  R +R E
Sbjct: 340 A---LEGNPLRTIRRE 352


>gi|189217917 FYVE, RhoGEF and PH domain containing 2 [Homo sapiens]
          Length = 655

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/62 (25%), Positives = 33/62 (53%)

Query: 112 KEKLEVYFSPGHFAHGSDRRMVRLEDLFQRFPRTPMSVEIKGKNEELIREIAGLVRRYDR 171
           ++ L++ FS    ++ +   M RL+DL++ + R  +  +I   +  L+RE   L   + R
Sbjct: 274 QKALDMIFSAAQHSNAAITEMERLQDLWEVYQRLGLEDDIVDPSNTLLREGPVLKISFRR 333

Query: 172 NE 173
           N+
Sbjct: 334 ND 335


>gi|4501951 adenosine A2b receptor [Homo sapiens]
          Length = 332

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 21/100 (21%)

Query: 195 MPLSFTISRGFWVLLSYYLGLLPFIPIPEKFFFCFLPNIINRTYFPFSCSCLNQLLAVVS 254
           +P + TIS GF    + + G L        F  CF+  +   + F      +++ LA+  
Sbjct: 61  IPFAITISLGF---CTDFYGCL--------FLACFVLVLTQSSIFSLLAVAVDRYLAICV 109

Query: 255 KWLIMRKSLIRHLEERGVQVVFWCLNEESDFEAAFSVGAT 294
              +  KSL+     RGV  V W L        AF +G T
Sbjct: 110 P--LRYKSLVTGTRARGVIAVLWVL--------AFGIGLT 139


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.140    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,208,998
Number of Sequences: 37866
Number of extensions: 521722
Number of successful extensions: 1332
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1325
Number of HSP's gapped (non-prelim): 13
length of query: 318
length of database: 18,247,518
effective HSP length: 102
effective length of query: 216
effective length of database: 14,385,186
effective search space: 3107200176
effective search space used: 3107200176
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.