Search of human proteins with 109389365

Search of human proteins with 109389365

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109389365 glucose-6-phosphate dehydrogenase isoform a [Homo
sapiens]
         (545 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109389365 glucose-6-phosphate dehydrogenase isoform a [Homo s...  1115   0.0  
gi|108773793 glucose-6-phosphate dehydrogenase isoform b [Homo s...  1054   0.0  
gi|52145310 hexose-6-phosphate dehydrogenase precursor [Homo sap...   224   2e-58
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ...    30   4.3  
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ...    30   4.3  
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...    30   4.3  
gi|47778940 C-type lectin, superfamily member 13 [Homo sapiens]        30   5.7  
gi|5729982 DNA-directed DNA polymerase eta [Homo sapiens]              30   7.4  
gi|229892328 IQ motif containing C isoform 1 [Homo sapiens]            29   9.7  
gi|194097448 RELT-like 2 [Homo sapiens]                                29   9.7  
gi|194097446 RELT-like 2 [Homo sapiens]                                29   9.7  
gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens]       29   9.7  
gi|157671949 rearranged L-myc fusion [Homo sapiens]                    29   9.7  

>gi|109389365 glucose-6-phosphate dehydrogenase isoform a [Homo
           sapiens]
          Length = 545

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 545/545 (100%), Positives = 545/545 (100%)

Query: 1   MGRRGSAPGNGRTLRGCERGGRRRRSADSVMAEQVALSRTQVCGILREELFQGDAFHQSD 60
           MGRRGSAPGNGRTLRGCERGGRRRRSADSVMAEQVALSRTQVCGILREELFQGDAFHQSD
Sbjct: 1   MGRRGSAPGNGRTLRGCERGGRRRRSADSVMAEQVALSRTQVCGILREELFQGDAFHQSD 60

Query: 61  THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKA 120
           THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKA
Sbjct: 61  THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKA 120

Query: 121 TPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAV 180
           TPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAV
Sbjct: 121 TPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAV 180

Query: 181 TKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQN 240
           TKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQN
Sbjct: 181 TKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQN 240

Query: 241 LMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCL 300
           LMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCL
Sbjct: 241 LMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCL 300

Query: 301 VAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPR 360
           VAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPR
Sbjct: 301 VAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPR 360

Query: 361 GSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNEL 420
           GSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNEL
Sbjct: 361 GSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNEL 420

Query: 421 VIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQM 480
           VIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQM
Sbjct: 421 VIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQM 480

Query: 481 HFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELMKRVGFQYEGTYKWV 540
           HFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELMKRVGFQYEGTYKWV
Sbjct: 481 HFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELMKRVGFQYEGTYKWV 540

Query: 541 NPHKL 545
           NPHKL
Sbjct: 541 NPHKL 545


>gi|108773793 glucose-6-phosphate dehydrogenase isoform b [Homo
           sapiens]
          Length = 515

 Score = 1054 bits (2726), Expect = 0.0
 Identities = 515/515 (100%), Positives = 515/515 (100%)

Query: 31  MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL 90
           MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL
Sbjct: 1   MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL 60

Query: 91  LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR 150
           LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR
Sbjct: 61  LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR 120

Query: 151 LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS 210
           LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS
Sbjct: 121 LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS 180

Query: 211 DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP 270
           DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP
Sbjct: 181 DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP 240

Query: 271 FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA 330
           FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA
Sbjct: 241 FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA 300

Query: 331 NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK 390
           NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK
Sbjct: 301 NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK 360

Query: 391 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL 450
           ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL
Sbjct: 361 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL 420

Query: 451 DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPI 510
           DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPI
Sbjct: 421 DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPI 480

Query: 511 PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL 545
           PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL
Sbjct: 481 PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL 515


>gi|52145310 hexose-6-phosphate dehydrogenase precursor [Homo
           sapiens]
          Length = 791

 Score =  224 bits (570), Expect = 2e-58
 Identities = 156/484 (32%), Positives = 251/484 (51%), Gaps = 47/484 (9%)

Query: 65  IIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKA---- 120
           I++GA+GDLAKK ++  ++ L+ D     ++F   +  + LT    ++  E   KA    
Sbjct: 29  ILLGATGDLAKKYLWQGLFQLYLDEAGRGHSF--SFHGAALTAP--KQGQELMAKALESL 84

Query: 121 ------TPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNAL--HLG-SQANRLFYLA 171
                  P    + +D F + S    Q   A  YQ LN  + A   H G  +A R+FY +
Sbjct: 85  SCPKDMAPSHCAEHKDQFLQLSQYR-QLKTAEDYQALNKDIEAQLQHAGLREAGRIFYFS 143

Query: 172 LPPTVYEAVTKNIHESCMSQIG-WNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRID 230
           +PP  YE + +NI+ SC    G W R+++EKPFG D  S+ +L+  + + F+E+++YR+D
Sbjct: 144 VPPFAYEDIARNINSSCRPGPGAWLRVVLEKPFGHDHFSAQQLATELGTFFQEEEMYRVD 203

Query: 231 HYLGKEMVQNLMVLRFANR-IFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDV 289
           HYLGK+ V  ++  R  NR     +WNR ++  V +  KE    EGR  +++E+G+IRDV
Sbjct: 204 HYLGKQAVAQILPFRDQNRKALDGLWNRHHVERVEIIMKETVDAEGRTSFYEEYGVIRDV 263

Query: 290 MQNHLLQMLCLVAMEKPASTNS-DDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEA 348
           +QNHL ++L LVAME P + +S + V   K++V + +  +Q  + V+GQY        E 
Sbjct: 264 LQNHLTEVLTLVAMELPHNVSSAEAVLRHKLQVFQALRGLQRGSAVVGQY----QSYSEQ 319

Query: 349 TKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAG 408
            +  L  P     S T TFAAV+++++N RW+GVPFIL  GKAL+ER    R+ F + A 
Sbjct: 320 VRRELQKPD-SFHSLTPTFAAVLVHIDNLRWEGVPFILMSGKALDERVGYARILFKNQAC 378

Query: 409 DI--------FHQQCKRNELVIRVQPNE----AVYTKMMTKKPGMFFNPEESE------- 449
            +           QC   +LV  +   +    AV       +P +  + +E E       
Sbjct: 379 CVQSEKHWAAAQSQCLPRQLVFHIGHGDLGSPAVLVSRNLFRPSLPSSWKEMEGPPGLRL 438

Query: 450 --LDLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKP 507
               L+    Y  V+  DA+  L+  +F G +  F+ ++ L  +W  +TPLL  +  + P
Sbjct: 439 FGSPLSDYYAYSPVRERDAHSVLLSHIFHGRKNFFITTENLLASWNFWTPLLESLAHKAP 498

Query: 508 KPIP 511
           +  P
Sbjct: 499 RLYP 502


>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
           [Homo sapiens]
          Length = 2000

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 12/77 (15%)

Query: 157 ALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNH 216
           A  +  +A   F++ L  T YE +T  I ++ +  I W  ++V++        + RL N+
Sbjct: 844 AFKMKREAQVKFHVLL--TSYELIT--IDQAALGSIRWACLVVDE--------AHRLKNN 891

Query: 217 ISSLFREDQIYRIDHYL 233
            S  FR    Y+IDH L
Sbjct: 892 QSKFFRVLNGYKIDHKL 908


>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
           [Homo sapiens]
          Length = 1966

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 12/77 (15%)

Query: 157 ALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNH 216
           A  +  +A   F++ L  T YE +T  I ++ +  I W  ++V++        + RL N+
Sbjct: 844 AFKMKREAQVKFHVLL--TSYELIT--IDQAALGSIRWACLVVDE--------AHRLKNN 891

Query: 217 ISSLFREDQIYRIDHYL 233
            S  FR    Y+IDH L
Sbjct: 892 QSKFFRVLNGYKIDHKL 908


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
           [Homo sapiens]
          Length = 2059

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 12/77 (15%)

Query: 157 ALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNH 216
           A  +  +A   F++ L  T YE +T  I ++ +  I W  ++V++        + RL N+
Sbjct: 903 AFKMKREAQVKFHVLL--TSYELIT--IDQAALGSIRWACLVVDE--------AHRLKNN 950

Query: 217 ISSLFREDQIYRIDHYL 233
            S  FR    Y+IDH L
Sbjct: 951 QSKFFRVLNGYKIDHKL 967


>gi|47778940 C-type lectin, superfamily member 13 [Homo sapiens]
          Length = 589

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 318 KVKVLKC-ISEVQANNVVLGQYVGNPDGEGEATKGYLDDPT 357
           ++++LKC +  V +   VLG ++GN + + +  KG L D T
Sbjct: 120 EIQMLKCRVDNVNSQLQVLGDHLGNTNADIQMVKGVLKDAT 160


>gi|5729982 DNA-directed DNA polymerase eta [Homo sapiens]
          Length = 713

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 509 PIPYIYG-SRGPTEADELMKRVGFQYEGTYKWVN 541
           P  YI G  +GPT A+E +++ G + +G ++W++
Sbjct: 143 PSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLD 176


>gi|229892328 IQ motif containing C isoform 1 [Homo sapiens]
          Length = 546

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 9   GNGRTLRGCERGGRRRRSADSVMAEQVALSR 39
           GNG++L+ C RG   RR   S+ AE  A+ R
Sbjct: 88  GNGKSLKACVRGFLVRRQFQSLRAEYEAIVR 118


>gi|194097448 RELT-like 2 [Homo sapiens]
          Length = 303

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 312 DDVRDEKV-KVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLD 354
           DD+ ++ V ++++CI + +AN   L + +G+ +GEG      +D
Sbjct: 65  DDMNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVD 108


>gi|194097446 RELT-like 2 [Homo sapiens]
          Length = 303

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 312 DDVRDEKV-KVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLD 354
           DD+ ++ V ++++CI + +AN   L + +G+ +GEG      +D
Sbjct: 65  DDMNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVD 108


>gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens]
          Length = 437

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 284 GIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQAN 331
           G    VM+  L+Q+ C  +  KPA+       D+++K +K + E  AN
Sbjct: 133 GFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDAN 180


>gi|157671949 rearranged L-myc fusion [Homo sapiens]
          Length = 1914

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 206 DLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVIL 265
           D  SSD+LS+  S+   E+ I  +DH    E +Q+  VL    ++FGP   ++  + + +
Sbjct: 893 DSNSSDQLSHSSSASMNEELIDTLDH---SETMQD--VLLSNEKVFGPSSLKEKCSSMAV 947

Query: 266 TFKEPFGTEGRGGYFDEFGIIRDVMQNHL 294
            F     T G  G    +   R  MQ HL
Sbjct: 948 CFDGTKFTCGFDGCGSTYKNARG-MQKHL 975


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,106,179
Number of Sequences: 37866
Number of extensions: 933444
Number of successful extensions: 1767
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1754
Number of HSP's gapped (non-prelim): 16
length of query: 545
length of database: 18,247,518
effective HSP length: 107
effective length of query: 438
effective length of database: 14,195,856
effective search space: 6217784928
effective search space used: 6217784928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.