Search of human proteins with 14270499

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14270499 protocadherin gamma subfamily B, 4 isoform 2
precursor [Homo sapiens]
         (803 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precurs...  1580   0.0  
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs...  1573   0.0  
gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precurs...  1317   0.0  
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs...  1316   0.0  
gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precurs...  1073   0.0  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...  1073   0.0  
gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precurs...  1073   0.0  
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs...  1073   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...  1047   0.0  
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs...  1047   0.0  
gi|14270496 protocadherin gamma subfamily B, 3 isoform 2 precurs...  1038   0.0  
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs...  1038   0.0  
gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precurs...  1030   0.0  
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs...  1030   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...   687   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...   687   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...   677   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...   677   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...   677   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...   677   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...   672   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...   672   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...   671   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...   670   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...   665   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...   665   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...   660   0.0  
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...   660   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...   656   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...   656   0.0  

>gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 803

 Score = 1580 bits (4092), Expect = 0.0
 Identities = 803/803 (100%), Positives = 803/803 (100%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE
Sbjct: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN
Sbjct: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL
Sbjct: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP
Sbjct: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT 300
           VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT
Sbjct: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT 300

Query: 301 VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAEL 360
           VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAEL
Sbjct: 301 VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAEL 360

Query: 361 GTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITV 420
           GTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITV
Sbjct: 361 GTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITV 420

Query: 421 TATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLG 480
           TATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLG
Sbjct: 421 TATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLG 480

Query: 481 PNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 540
           PNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPAL
Sbjct: 481 PNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 540

Query: 541 SANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA 600
           SANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA
Sbjct: 541 SANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA 600

Query: 601 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHL 660
           WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHL
Sbjct: 601 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHL 660

Query: 661 VFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPA 720
           VFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPA
Sbjct: 661 VFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPA 720

Query: 721 SWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG 780
           SWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG
Sbjct: 721 SWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG 780

Query: 781 DSSGALFPLCNSSELTSHQVSFL 803
           DSSGALFPLCNSSELTSHQVSFL
Sbjct: 781 DSSGALFPLCNSSELTSHQVSFL 803


>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score = 1573 bits (4074), Expect = 0.0
 Identities = 799/799 (100%), Positives = 799/799 (100%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE
Sbjct: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN
Sbjct: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL
Sbjct: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP
Sbjct: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT 300
           VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT
Sbjct: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT 300

Query: 301 VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAEL 360
           VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAEL
Sbjct: 301 VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAEL 360

Query: 361 GTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITV 420
           GTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITV
Sbjct: 361 GTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITV 420

Query: 421 TATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLG 480
           TATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLG
Sbjct: 421 TATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLG 480

Query: 481 PNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 540
           PNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPAL
Sbjct: 481 PNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 540

Query: 541 SANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA 600
           SANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA
Sbjct: 541 SANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA 600

Query: 601 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHL 660
           WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHL
Sbjct: 601 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHL 660

Query: 661 VFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPA 720
           VFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPA
Sbjct: 661 VFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPA 720

Query: 721 SWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG 780
           SWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG
Sbjct: 721 SWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG 780

Query: 781 DSSGALFPLCNSSELTSHQ 799
           DSSGALFPLCNSSELTSHQ
Sbjct: 781 DSSGALFPLCNSSELTSHQ 799


>gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1317 bits (3409), Expect = 0.0
 Identities = 671/805 (83%), Positives = 724/805 (89%), Gaps = 4/805 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE
Sbjct: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN
Sbjct: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           VEIEDINDHTPKFTQNSFELQISESAQPGTRFIL  A DADIG N+LQ Y+LS +  FSL
Sbjct: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           I KEK DGSKYPE+ L+  LDRE+Q  + L LTALD G PPLS T ++ + VTDANDN P
Sbjct: 181 IIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT 300
           VF++DVYRVSL ENV PGTTVLQV+ATDQDEG+N+EIT+SF    QI  F LNS +GEIT
Sbjct: 241 VFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQI--FSLNSKSGEIT 298

Query: 301 VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAEL 360
               LDFEE KEYS+V+E RDGGG++AQCTVE+ + DENDN+PEV F SL  +I+E+A  
Sbjct: 299 TQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVP 358

Query: 361 GTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITV 420
           GT IAL+K+ D+DS  NGEV C+L+G+VPFKI++SS+N+YKLVTD  LDREQ PEYN+T+
Sbjct: 359 GTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTI 418

Query: 421 TATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLG 480
           TATDRGKPPLSSS S+ LHI DVNDNAPVF Q+SY+V V ENNPPGASI+QV ASD DLG
Sbjct: 419 TATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLG 478

Query: 481 PNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 540
            NGQVSY IMASDLE   L+SYVS+SA+SGVVFAQRAFD+EQLR FELTLQARDQGSPAL
Sbjct: 479 LNGQVSYSIMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPAL 538

Query: 541 SANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA 600
           SANVSLRVLV DRNDNAPRVLYPALGPDGSALFDMVP AAEPGYLVTKVVAVDADSGHNA
Sbjct: 539 SANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNA 598

Query: 601 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHL 660
           WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATLHL
Sbjct: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658

Query: 661 VFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPA 720
           VFADSLQEVLPDITDRP PSD QAELQFYLVVALALISVLFL+A+ILA+ALRLRRSSSPA
Sbjct: 659 VFADSLQEVLPDITDRPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPA 718

Query: 721 SWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG 780
           +WSCFQPGLCVKS  VVPPNYS+GTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG
Sbjct: 719 AWSCFQPGLCVKSGPVVPPNYSQGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG 778

Query: 781 DSSGALFPLCNSSELTSHQ--VSFL 803
           DSSGALFPLCNSSE TSH   VSF+
Sbjct: 779 DSSGALFPLCNSSESTSHPELVSFI 803


>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score = 1316 bits (3407), Expect = 0.0
 Identities = 668/798 (83%), Positives = 720/798 (90%), Gaps = 2/798 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE
Sbjct: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN
Sbjct: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           VEIEDINDHTPKFTQNSFELQISESAQPGTRFIL  A DADIG N+LQ Y+LS +  FSL
Sbjct: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           I KEK DGSKYPE+ L+  LDRE+Q  + L LTALD G PPLS T ++ + VTDANDN P
Sbjct: 181 IIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEIT 300
           VF++DVYRVSL ENV PGTTVLQV+ATDQDEG+N+EIT+SF    QI  F LNS +GEIT
Sbjct: 241 VFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQI--FSLNSKSGEIT 298

Query: 301 VLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAEL 360
               LDFEE KEYS+V+E RDGGG++AQCTVE+ + DENDN+PEV F SL  +I+E+A  
Sbjct: 299 TQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVP 358

Query: 361 GTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITV 420
           GT IAL+K+ D+DS  NGEV C+L+G+VPFKI++SS+N+YKLVTD  LDREQ PEYN+T+
Sbjct: 359 GTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTI 418

Query: 421 TATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLG 480
           TATDRGKPPLSSS S+ LHI DVNDNAPVF Q+SY+V V ENNPPGASI+QV ASD DLG
Sbjct: 419 TATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLG 478

Query: 481 PNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 540
            NGQVSY IMASDLE   L+SYVS+SA+SGVVFAQRAFD+EQLR FELTLQARDQGSPAL
Sbjct: 479 LNGQVSYSIMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPAL 538

Query: 541 SANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNA 600
           SANVSLRVLV DRNDNAPRVLYPALGPDGSALFDMVP AAEPGYLVTKVVAVDADSGHNA
Sbjct: 539 SANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNA 598

Query: 601 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHL 660
           WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATLHL
Sbjct: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658

Query: 661 VFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPA 720
           VFADSLQEVLPDITDRP PSD QAELQFYLVVALALISVLFL+A+ILA+ALRLRRSSSPA
Sbjct: 659 VFADSLQEVLPDITDRPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPA 718

Query: 721 SWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG 780
           +WSCFQPGLCVKS  VVPPNYS+GTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG
Sbjct: 719 AWSCFQPGLCVKSGPVVPPNYSQGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCG 778

Query: 781 DSSGALFPLCNSSELTSH 798
           DSSGALFPLCNSSE TSH
Sbjct: 779 DSSGALFPLCNSSESTSH 796


>gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 810

 Score = 1073 bits (2774), Expect = 0.0
 Identities = 552/789 (69%), Positives = 644/789 (81%), Gaps = 8/789 (1%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYF 75
           VLF FLLSLFC A+ +QIRY IPEE+  GS VG LA DLG SV+ELPTRKLRVS+E  YF
Sbjct: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-YF 72

Query: 76  TVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQ 135
            VS ESG+LLV+ R+DRE+ICG+K  CALEFE VAENP+N +HV V I+DIND+ P+F  
Sbjct: 73  NVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFVA 132

Query: 136 NSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEMV 195
              +L+I ESA PG +F L SA DAD+  N+L+ Y ++P+ +FSL  KE  DGSKYP ++
Sbjct: 133 KGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLL 192

Query: 196 LKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSENV 255
           L+ PLDRE Q S+ L LTA+D G PPLS T  I + VTDANDNAPVFSQ+VYRVSL ENV
Sbjct: 193 LEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENV 252

Query: 256 YPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ-FDLNSNTGEITVLNTLDFEEVKEYS 314
             GT+VL+V ATDQDEG+NAEIT++F  +   T  F+LN NTG+IT   TLDFEE   Y 
Sbjct: 253 PWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYV 312

Query: 315 IVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRDKDS 374
           + +EA+DGG   A C V++E++DENDNAPEV F S  N I ED++LGT IAL+KVRDKDS
Sbjct: 313 LSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDS 372

Query: 375 RHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLSSSS 434
             NG VTC  + +VPFK+ ++S+N YKLV    L+REQ  +YN+T+ ATD+GKP LSS +
Sbjct: 373 GQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRT 432

Query: 435 SITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMASDL 494
           SITLHI D+NDNAPVF Q+SY+VHV+ENNPPGASI+QV ASDPDLGPNG+VSY I+ASDL
Sbjct: 433 SITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDL 492

Query: 495 EQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRN 554
           E REL SYVS+S +SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV D N
Sbjct: 493 EPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLN 552

Query: 555 DNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 614
           DNAPRVLYPALGPDGSALFDMVP AAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL
Sbjct: 553 DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 612

Query: 615 FSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDIT 674
           FSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATLHL+FADSLQEVLPD++
Sbjct: 613 FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLS 672

Query: 675 DRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLCVKSE 734
           DRP+PSD Q ELQFYLVVALALISVLFL+A+ILAIALRLRRSSS  +  CFQ GLC KS 
Sbjct: 673 DRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSG 732

Query: 735 SVVPPNYSEGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSS 793
             VPPN+SEGTLPYSYNLC+A H+ KTEFN L  + +++  QD+LC D S     +C S+
Sbjct: 733 PGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPS---MVVCASN 789

Query: 794 ELTSHQVSF 802
           E   H++++
Sbjct: 790 E--DHKIAY 796


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score = 1073 bits (2774), Expect = 0.0
 Identities = 545/800 (68%), Positives = 637/800 (79%), Gaps = 2/800 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MG    +  RA    VLF  LL LF P L E IRY IPEE+ KGSVVGNLA DLG SV +
Sbjct: 1   MGGSCAQRRRAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLD 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           +  RKLRVS+EK +F+V AESG+LLV +R+DRE+IC ++  C L+ EAV ENPLN +HV 
Sbjct: 61  VSARKLRVSAEKLHFSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVI 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           V IED+NDH P+F +    L+I ESA  GTR  L  A D DI  N++++Y+++ + +FSL
Sbjct: 121 VVIEDVNDHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           + +  SDG KYPE+ L+  LDRE+Q+S+ L LTALD G PP S+TA I + V D NDN P
Sbjct: 181 MVRVNSDGGKYPELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGE 298
           VFS+D YR+SLSEN+ PG+ VLQVTATDQDEGVNAEI + F   +Q T+  F L+  TG 
Sbjct: 241 VFSRDEYRISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGM 300

Query: 299 ITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDA 358
           I    + DFE+V+ Y++ +EA+DGGG+  QC V +E++DENDN+PE+I  SL + I+E++
Sbjct: 301 IKNNQSFDFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENS 360

Query: 359 ELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNI 418
             G  +AL K RD D   NGEV C +E D+PFKI +SS N YKLVTD  LDREQ PEYN+
Sbjct: 361 PPGMVVALFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNV 420

Query: 419 TVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPD 478
           T+ ATDRGKPPLSSS SITL++ D+NDNAPVF Q+SY+VHVAENNPPGASI+QV ASDPD
Sbjct: 421 TIVATDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPD 480

Query: 479 LGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSP 538
           LG NG +SY I+ASDLE   +SSYVS+SA+SGVVFAQRAFDHEQLRAF LTLQARD GSP
Sbjct: 481 LGLNGHISYSIVASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSP 540

Query: 539 ALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGH 598
            LSANVSLRVLV DRNDNAPRVLYPALGPDGSA FDMVP +AEPGYLVTKVVAVDADSGH
Sbjct: 541 TLSANVSLRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGH 600

Query: 599 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATL 658
           NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATL
Sbjct: 601 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATL 660

Query: 659 HLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSS 718
           HLVFAD+LQE+LPD++DRP  SD QAELQFYLVVALALISVLFL+A+ILAIALRLRRS S
Sbjct: 661 HLVFADNLQEILPDLSDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLS 720

Query: 719 PASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDIL 778
           PA+W CF PGLCVKS  VVPPNYSEGTLPYSYNLC+AHTG  EFNFLKCS  L S +D++
Sbjct: 721 PATWDCFHPGLCVKSGPVVPPNYSEGTLPYSYNLCIAHTGTKEFNFLKCSVPLHSNEDMV 780

Query: 779 CGDSSGALFPLCNSSELTSH 798
           C  S GAL P     +LTSH
Sbjct: 781 CSVSPGALIPPHGGEDLTSH 800


>gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1073 bits (2774), Expect = 0.0
 Identities = 545/800 (68%), Positives = 637/800 (79%), Gaps = 2/800 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MG    +  RA    VLF  LL LF P L E IRY IPEE+ KGSVVGNLA DLG SV +
Sbjct: 1   MGGSCAQRRRAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLD 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           +  RKLRVS+EK +F+V AESG+LLV +R+DRE+IC ++  C L+ EAV ENPLN +HV 
Sbjct: 61  VSARKLRVSAEKLHFSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVI 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           V IED+NDH P+F +    L+I ESA  GTR  L  A D DI  N++++Y+++ + +FSL
Sbjct: 121 VVIEDVNDHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           + +  SDG KYPE+ L+  LDRE+Q+S+ L LTALD G PP S+TA I + V D NDN P
Sbjct: 181 MVRVNSDGGKYPELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGE 298
           VFS+D YR+SLSEN+ PG+ VLQVTATDQDEGVNAEI + F   +Q T+  F L+  TG 
Sbjct: 241 VFSRDEYRISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGM 300

Query: 299 ITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDA 358
           I    + DFE+V+ Y++ +EA+DGGG+  QC V +E++DENDN+PE+I  SL + I+E++
Sbjct: 301 IKNNQSFDFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENS 360

Query: 359 ELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNI 418
             G  +AL K RD D   NGEV C +E D+PFKI +SS N YKLVTD  LDREQ PEYN+
Sbjct: 361 PPGMVVALFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNV 420

Query: 419 TVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPD 478
           T+ ATDRGKPPLSSS SITL++ D+NDNAPVF Q+SY+VHVAENNPPGASI+QV ASDPD
Sbjct: 421 TIVATDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPD 480

Query: 479 LGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSP 538
           LG NG +SY I+ASDLE   +SSYVS+SA+SGVVFAQRAFDHEQLRAF LTLQARD GSP
Sbjct: 481 LGLNGHISYSIVASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSP 540

Query: 539 ALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGH 598
            LSANVSLRVLV DRNDNAPRVLYPALGPDGSA FDMVP +AEPGYLVTKVVAVDADSGH
Sbjct: 541 TLSANVSLRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGH 600

Query: 599 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATL 658
           NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATL
Sbjct: 601 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATL 660

Query: 659 HLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSS 718
           HLVFAD+LQE+LPD++DRP  SD QAELQFYLVVALALISVLFL+A+ILAIALRLRRS S
Sbjct: 661 HLVFADNLQEILPDLSDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLS 720

Query: 719 PASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDIL 778
           PA+W CF PGLCVKS  VVPPNYSEGTLPYSYNLC+AHTG  EFNFLKCS  L S +D++
Sbjct: 721 PATWDCFHPGLCVKSGPVVPPNYSEGTLPYSYNLCIAHTGTKEFNFLKCSVPLHSNEDMV 780

Query: 779 CGDSSGALFPLCNSSELTSH 798
           C  S GAL P     +LTSH
Sbjct: 781 CSVSPGALIPPHGGEDLTSH 800


>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 927

 Score = 1073 bits (2774), Expect = 0.0
 Identities = 552/789 (69%), Positives = 644/789 (81%), Gaps = 8/789 (1%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYF 75
           VLF FLLSLFC A+ +QIRY IPEE+  GS VG LA DLG SV+ELPTRKLRVS+E  YF
Sbjct: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-YF 72

Query: 76  TVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQ 135
            VS ESG+LLV+ R+DRE+ICG+K  CALEFE VAENP+N +HV V I+DIND+ P+F  
Sbjct: 73  NVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFVA 132

Query: 136 NSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEMV 195
              +L+I ESA PG +F L SA DAD+  N+L+ Y ++P+ +FSL  KE  DGSKYP ++
Sbjct: 133 KGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLL 192

Query: 196 LKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSENV 255
           L+ PLDRE Q S+ L LTA+D G PPLS T  I + VTDANDNAPVFSQ+VYRVSL ENV
Sbjct: 193 LEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENV 252

Query: 256 YPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ-FDLNSNTGEITVLNTLDFEEVKEYS 314
             GT+VL+V ATDQDEG+NAEIT++F  +   T  F+LN NTG+IT   TLDFEE   Y 
Sbjct: 253 PWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYV 312

Query: 315 IVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRDKDS 374
           + +EA+DGG   A C V++E++DENDNAPEV F S  N I ED++LGT IAL+KVRDKDS
Sbjct: 313 LSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDS 372

Query: 375 RHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLSSSS 434
             NG VTC  + +VPFK+ ++S+N YKLV    L+REQ  +YN+T+ ATD+GKP LSS +
Sbjct: 373 GQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRT 432

Query: 435 SITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMASDL 494
           SITLHI D+NDNAPVF Q+SY+VHV+ENNPPGASI+QV ASDPDLGPNG+VSY I+ASDL
Sbjct: 433 SITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDL 492

Query: 495 EQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRN 554
           E REL SYVS+S +SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV D N
Sbjct: 493 EPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLN 552

Query: 555 DNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 614
           DNAPRVLYPALGPDGSALFDMVP AAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL
Sbjct: 553 DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 612

Query: 615 FSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDIT 674
           FSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATLHL+FADSLQEVLPD++
Sbjct: 613 FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLS 672

Query: 675 DRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLCVKSE 734
           DRP+PSD Q ELQFYLVVALALISVLFL+A+ILAIALRLRRSSS  +  CFQ GLC KS 
Sbjct: 673 DRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSG 732

Query: 735 SVVPPNYSEGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSS 793
             VPPN+SEGTLPYSYNLC+A H+ KTEFN L  + +++  QD+LC D S     +C S+
Sbjct: 733 PGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPS---MVVCASN 789

Query: 794 ELTSHQVSF 802
           E   H++++
Sbjct: 790 E--DHKIAY 796


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1047 bits (2708), Expect = 0.0
 Identities = 535/786 (68%), Positives = 631/786 (80%), Gaps = 3/786 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           M + +G  G    L VL  FLLSLF  AL  QIRY IPEE+ K SVVGNLA DLG SV++
Sbjct: 1   MKASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRD 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           LP RKLRVS+EK YFTV+ ESG+LLVS R+DRE+ICGK+P C L+F+ VAENPLN +++ 
Sbjct: 61  LPARKLRVSAEKEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIA 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           V ++DIND+TP F Q    L+I ES +PGT F L  A D+D+G N+LQ Y L+ +++F L
Sbjct: 121 VIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
             K+  DG KYPE++LK  LDRE+   + L LTA+D G PP S T QI + VTDANDN P
Sbjct: 181 AEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGE 298
           VFSQDVYRV+L E+V PG  VLQVTATD+DEG+NAEIT+SF    +  +  F+LN  TGE
Sbjct: 241 VFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGE 300

Query: 299 ITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDA 358
           IT  + LDFE    Y++ +EA+D G + A C+++VE++D+ND APEVI  S+   + ED+
Sbjct: 301 ITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDS 360

Query: 359 ELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNI 418
             GT IAL+K RD+DS  NGEV C++ G+  F + +SS+N YKLVTD  LDRE+ PEYN+
Sbjct: 361 PPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNL 420

Query: 419 TVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPD 478
           T+TATD GKPPLSSS  +TLHI DVNDNAPVF Q+SY+VHVAENNPPGASI+Q+ ASDPD
Sbjct: 421 TITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPD 480

Query: 479 LGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSP 538
           LGP+GQVSY I+ASDL+ RE+ SYVS+SA+SGVVFAQRAFDHEQLRAFELTLQARDQGSP
Sbjct: 481 LGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSP 540

Query: 539 ALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGH 598
           ALSANVSLRVLV D NDNAPRVLYPALGPDGSALFDMVP AAEPGYLVTKVVAVDADSGH
Sbjct: 541 ALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGH 600

Query: 599 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATL 658
           NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATL
Sbjct: 601 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATL 660

Query: 659 HLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSS 718
           HL+FADSLQEVLPD++DR +PSD QA+LQFYLVVALALISVLF +A+ILAI+LRLR SS 
Sbjct: 661 HLIFADSLQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRLRLSSR 720

Query: 719 PASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDI 777
             +W CFQPGL  K    V PNYSEGTLPYSYNLCVA  + KTEFNFL  + +L   QD+
Sbjct: 721 SDAWDCFQPGLSSKPGPGVLPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDL 780

Query: 778 LCGDSS 783
           +C ++S
Sbjct: 781 VCDNAS 786


>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 811

 Score = 1047 bits (2708), Expect = 0.0
 Identities = 535/786 (68%), Positives = 631/786 (80%), Gaps = 3/786 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           M + +G  G    L VL  FLLSLF  AL  QIRY IPEE+ K SVVGNLA DLG SV++
Sbjct: 1   MKASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRD 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           LP RKLRVS+EK YFTV+ ESG+LLVS R+DRE+ICGK+P C L+F+ VAENPLN +++ 
Sbjct: 61  LPARKLRVSAEKEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIA 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           V ++DIND+TP F Q    L+I ES +PGT F L  A D+D+G N+LQ Y L+ +++F L
Sbjct: 121 VIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
             K+  DG KYPE++LK  LDRE+   + L LTA+D G PP S T QI + VTDANDN P
Sbjct: 181 AEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGE 298
           VFSQDVYRV+L E+V PG  VLQVTATD+DEG+NAEIT+SF    +  +  F+LN  TGE
Sbjct: 241 VFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGE 300

Query: 299 ITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDA 358
           IT  + LDFE    Y++ +EA+D G + A C+++VE++D+ND APEVI  S+   + ED+
Sbjct: 301 ITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDS 360

Query: 359 ELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNI 418
             GT IAL+K RD+DS  NGEV C++ G+  F + +SS+N YKLVTD  LDRE+ PEYN+
Sbjct: 361 PPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNL 420

Query: 419 TVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPD 478
           T+TATD GKPPLSSS  +TLHI DVNDNAPVF Q+SY+VHVAENNPPGASI+Q+ ASDPD
Sbjct: 421 TITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPD 480

Query: 479 LGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSP 538
           LGP+GQVSY I+ASDL+ RE+ SYVS+SA+SGVVFAQRAFDHEQLRAFELTLQARDQGSP
Sbjct: 481 LGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSP 540

Query: 539 ALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGH 598
           ALSANVSLRVLV D NDNAPRVLYPALGPDGSALFDMVP AAEPGYLVTKVVAVDADSGH
Sbjct: 541 ALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGH 600

Query: 599 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATL 658
           NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATL
Sbjct: 601 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATL 660

Query: 659 HLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSS 718
           HL+FADSLQEVLPD++DR +PSD QA+LQFYLVVALALISVLF +A+ILAI+LRLR SS 
Sbjct: 661 HLIFADSLQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRLRLSSR 720

Query: 719 PASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDI 777
             +W CFQPGL  K    V PNYSEGTLPYSYNLCVA  + KTEFNFL  + +L   QD+
Sbjct: 721 SDAWDCFQPGLSSKPGPGVLPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDL 780

Query: 778 LCGDSS 783
           +C ++S
Sbjct: 781 VCDNAS 786


>gi|14270496 protocadherin gamma subfamily B, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 814

 Score = 1038 bits (2684), Expect = 0.0
 Identities = 531/786 (67%), Positives = 623/786 (79%), Gaps = 3/786 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MG+ +G  G A +  +LFLFLLSL    L E IRY IPEE+ +GS+VGNLA DLGF V +
Sbjct: 1   MGNSSGWRGPAGQRRMLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGD 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           LPTR LRV +EK +FTVS E+G LLVS R+DREEICGKK  C LEFE VAE PLNF+HV 
Sbjct: 61  LPTRNLRVIAEKKFFTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVT 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           V I+DIND+ P F+QN  EL+ISE A  G  F L SA D D+G N+LQ Y LSP  HFSL
Sbjct: 121 VLIQDINDNPPTFSQNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           I KE  DGS+YPE+VLK PLDRE+Q  +HL LTA+D G P  S T QI V+V DANDN P
Sbjct: 181 IQKENLDGSRYPELVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGE 298
           VF+QD+YRV+++EN+  G++VL+V A D DEG+NAEI ++F    +  +  F L+S TGE
Sbjct: 241 VFTQDMYRVNVAENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGE 300

Query: 299 ITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDA 358
           +T +  LDFEE   Y+I +EA+DGG   A C V++++ DENDNAPE+   S    I EDA
Sbjct: 301 LTTIGELDFEERDSYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDA 360

Query: 359 ELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNI 418
           ELGT +AL+K  D DS  NGE+ C+L+G+ PFKI+  ++NTY+LVTD  LDREQ PEYN+
Sbjct: 361 ELGTAVALIKTHDLDSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNV 420

Query: 419 TVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPD 478
           T+TATD+G PPLSSS +ITLHI DVNDN PVF Q+SY VHVAENNPPGASI+ VRASDPD
Sbjct: 421 TITATDKGNPPLSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPD 480

Query: 479 LGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSP 538
           LGPNG VSY I+ASDLE RELSSYVS+SA SGVVFAQRAFDHEQLRAFELTLQARDQGSP
Sbjct: 481 LGPNGLVSYYIVASDLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSP 540

Query: 539 ALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGH 598
            LSANVSLRVLVDDRNDNAP VLYPALGP+GSALFDMVP +AEPGYLVTKVVAVDADSG+
Sbjct: 541 TLSANVSLRVLVDDRNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGY 600

Query: 599 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATL 658
           NAWLSYH++QASEPGLFSLGLRTGEVRTAR LGDR+A RQRLLV VRDGGQ PLSAT  L
Sbjct: 601 NAWLSYHIVQASEPGLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVML 660

Query: 659 HLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSS 718
           HL+FADSLQE+ PD++DRP PSD QAELQF+LVVALALISVLFL+A+ILAI+LRLR SS 
Sbjct: 661 HLIFADSLQEIQPDLSDRPTPSDPQAELQFHLVVALALISVLFLLAVILAISLRLRCSSR 720

Query: 719 PASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDI 777
           PA+   FQPG+C K+   V P YSE TLPYSYN C A H+  TEF FL    + ++ QD+
Sbjct: 721 PATEGYFQPGVCFKTVPGVLPTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQDL 780

Query: 778 LCGDSS 783
           LC ++S
Sbjct: 781 LCDEAS 786


>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score = 1038 bits (2684), Expect = 0.0
 Identities = 531/786 (67%), Positives = 623/786 (79%), Gaps = 3/786 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MG+ +G  G A +  +LFLFLLSL    L E IRY IPEE+ +GS+VGNLA DLGF V +
Sbjct: 1   MGNSSGWRGPAGQRRMLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGD 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           LPTR LRV +EK +FTVS E+G LLVS R+DREEICGKK  C LEFE VAE PLNF+HV 
Sbjct: 61  LPTRNLRVIAEKKFFTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVT 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           V I+DIND+ P F+QN  EL+ISE A  G  F L SA D D+G N+LQ Y LSP  HFSL
Sbjct: 121 VLIQDINDNPPTFSQNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           I KE  DGS+YPE+VLK PLDRE+Q  +HL LTA+D G P  S T QI V+V DANDN P
Sbjct: 181 IQKENLDGSRYPELVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGE 298
           VF+QD+YRV+++EN+  G++VL+V A D DEG+NAEI ++F    +  +  F L+S TGE
Sbjct: 241 VFTQDMYRVNVAENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGE 300

Query: 299 ITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDA 358
           +T +  LDFEE   Y+I +EA+DGG   A C V++++ DENDNAPE+   S    I EDA
Sbjct: 301 LTTIGELDFEERDSYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDA 360

Query: 359 ELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNI 418
           ELGT +AL+K  D DS  NGE+ C+L+G+ PFKI+  ++NTY+LVTD  LDREQ PEYN+
Sbjct: 361 ELGTAVALIKTHDLDSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNV 420

Query: 419 TVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPD 478
           T+TATD+G PPLSSS +ITLHI DVNDN PVF Q+SY VHVAENNPPGASI+ VRASDPD
Sbjct: 421 TITATDKGNPPLSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPD 480

Query: 479 LGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSP 538
           LGPNG VSY I+ASDLE RELSSYVS+SA SGVVFAQRAFDHEQLRAFELTLQARDQGSP
Sbjct: 481 LGPNGLVSYYIVASDLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSP 540

Query: 539 ALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGH 598
            LSANVSLRVLVDDRNDNAP VLYPALGP+GSALFDMVP +AEPGYLVTKVVAVDADSG+
Sbjct: 541 TLSANVSLRVLVDDRNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGY 600

Query: 599 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATL 658
           NAWLSYH++QASEPGLFSLGLRTGEVRTAR LGDR+A RQRLLV VRDGGQ PLSAT  L
Sbjct: 601 NAWLSYHIVQASEPGLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVML 660

Query: 659 HLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSS 718
           HL+FADSLQE+ PD++DRP PSD QAELQF+LVVALALISVLFL+A+ILAI+LRLR SS 
Sbjct: 661 HLIFADSLQEIQPDLSDRPTPSDPQAELQFHLVVALALISVLFLLAVILAISLRLRCSSR 720

Query: 719 PASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDI 777
           PA+   FQPG+C K+   V P YSE TLPYSYN C A H+  TEF FL    + ++ QD+
Sbjct: 721 PATEGYFQPGVCFKTVPGVLPTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQDL 780

Query: 778 LCGDSS 783
           LC ++S
Sbjct: 781 LCDEAS 786


>gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 808

 Score = 1030 bits (2663), Expect = 0.0
 Identities = 538/807 (66%), Positives = 621/807 (76%), Gaps = 6/807 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MG    +  RA    VLF  LL LF P LCE IRY IPEE+ KGSVVGNLA DLG SV +
Sbjct: 1   MGGSCAQRRRAGPRQVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLD 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           +  R+LRVS+EK +F+V A+SG+LLV  R+DRE+IC ++  C L+ EAV ENPLN +HV 
Sbjct: 61  VSARELRVSAEKLHFSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVI 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           V IED+NDH P+F ++   L+ISES   G   IL SA D DI  N+L  YQLSP+++FSL
Sbjct: 121 VVIEDVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           + K+  DG KYPE+VL+  LDRE Q ++HL LTALD G PP S TAQI +LV DANDN P
Sbjct: 181 VEKDNPDGGKYPELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGE 298
           VFSQDVYRVSL E+V PGT++L+V ATDQDEG+N+EIT+SF   +   Q  F L+  TG 
Sbjct: 241 VFSQDVYRVSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGN 300

Query: 299 ITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDA 358
           I     LDFEEV+ Y+I +EA+D G +  +C V VEV+DENDN+PE+I  SL + IMED+
Sbjct: 301 ILTQQPLDFEEVERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDS 360

Query: 359 ELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNI 418
             G  +AL K RD+DS  NGEV C L   VPFKI +SS N YKLVTD  LDREQ PEYN+
Sbjct: 361 PPGVVVALFKTRDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNV 420

Query: 419 TVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPD 478
           T+ ATDRGKPPLSSS +ITLHI DVNDNAPVF QS+Y+VHV ENN PGASI+QV ASDPD
Sbjct: 421 TIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPD 480

Query: 479 LGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSP 538
            G NG+VSY ++ASDLE R LSSYVS+SA+SGVVFAQRAFDHEQLR FELTLQARDQGSP
Sbjct: 481 FGLNGRVSYSLIASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSP 540

Query: 539 ALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGH 598
           ALSANVSLRVLV DRNDNAPRVLYPALGPDGSALFD VP AA+PGYLVTKVVAVDADSGH
Sbjct: 541 ALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGH 600

Query: 599 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATL 658
           NAWLSYHV+QASEPGLFSLGLRTGEVR  RALGD+D+VRQRLLVAVRDGGQPPLSATATL
Sbjct: 601 NAWLSYHVVQASEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATL 660

Query: 659 HLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSS 718
           HLVFADSLQEVLPD +D P PSD QAE+QFYLVVALALISVLFL+A+ILAIALRLR+S S
Sbjct: 661 HLVFADSLQEVLPDFSDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFS 720

Query: 719 PASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCV-AHTGKTEFNFLKCSEQLSSGQDI 777
           P +  CF+  LC KS  V PPNYSEGTLPY+YN CV       EFNF    +   + QD 
Sbjct: 721 PTAGDCFESVLCSKSGPVGPPNYSEGTLPYAYNFCVPGDQMNPEFNFFTSVDHCPATQDN 780

Query: 778 LCGDS---SGALFPLCNSSELTSHQVS 801
           L  DS   +  L P   + +    QVS
Sbjct: 781 LNKDSMLLASILTPSVEADKKILKQVS 807


>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score = 1030 bits (2662), Expect = 0.0
 Identities = 533/785 (67%), Positives = 613/785 (78%), Gaps = 3/785 (0%)

Query: 1   MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQE 60
           MG    +  RA    VLF  LL LF P LCE IRY IPEE+ KGSVVGNLA DLG SV +
Sbjct: 1   MGGSCAQRRRAGPRQVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLD 60

Query: 61  LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVN 120
           +  R+LRVS+EK +F+V A+SG+LLV  R+DRE+IC ++  C L+ EAV ENPLN +HV 
Sbjct: 61  VSARELRVSAEKLHFSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVI 120

Query: 121 VEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSL 180
           V IED+NDH P+F ++   L+ISES   G   IL SA D DI  N+L  YQLSP+++FSL
Sbjct: 121 VVIEDVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSL 180

Query: 181 INKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAP 240
           + K+  DG KYPE+VL+  LDRE Q ++HL LTALD G PP S TAQI +LV DANDN P
Sbjct: 181 VEKDNPDGGKYPELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPP 240

Query: 241 VFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGE 298
           VFSQDVYRVSL E+V PGT++L+V ATDQDEG+N+EIT+SF   +   Q  F L+  TG 
Sbjct: 241 VFSQDVYRVSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGN 300

Query: 299 ITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDA 358
           I     LDFEEV+ Y+I +EA+D G +  +C V VEV+DENDN+PE+I  SL + IMED+
Sbjct: 301 ILTQQPLDFEEVERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDS 360

Query: 359 ELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNI 418
             G  +AL K RD+DS  NGEV C L   VPFKI +SS N YKLVTD  LDREQ PEYN+
Sbjct: 361 PPGVVVALFKTRDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNV 420

Query: 419 TVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPD 478
           T+ ATDRGKPPLSSS +ITLHI DVNDNAPVF QS+Y+VHV ENN PGASI+QV ASDPD
Sbjct: 421 TIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPD 480

Query: 479 LGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSP 538
            G NG+VSY ++ASDLE R LSSYVS+SA+SGVVFAQRAFDHEQLR FELTLQARDQGSP
Sbjct: 481 FGLNGRVSYSLIASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSP 540

Query: 539 ALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGH 598
           ALSANVSLRVLV DRNDNAPRVLYPALGPDGSALFD VP AA+PGYLVTKVVAVDADSGH
Sbjct: 541 ALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGH 600

Query: 599 NAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATL 658
           NAWLSYHV+QASEPGLFSLGLRTGEVR  RALGD+D+VRQRLLVAVRDGGQPPLSATATL
Sbjct: 601 NAWLSYHVVQASEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATL 660

Query: 659 HLVFADSLQEVLPDITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSS 718
           HLVFADSLQEVLPD +D P PSD QAE+QFYLVVALALISVLFL+A+ILAIALRLR+S S
Sbjct: 661 HLVFADSLQEVLPDFSDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFS 720

Query: 719 PASWSCFQPGLCVKSESVVPPNYSEGTLPYSYNLCV-AHTGKTEFNFLKCSEQLSSGQDI 777
           P +  CF+  LC KS  V PPNYSEGTLPY+YN CV       EFNF    +   + QD 
Sbjct: 721 PTAGDCFESVLCSKSGPVGPPNYSEGTLPYAYNFCVPGDQMNPEFNFFTSVDHCPATQDN 780

Query: 778 LCGDS 782
           L  DS
Sbjct: 781 LNKDS 785


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  687 bits (1772), Expect = 0.0
 Identities = 362/707 (51%), Positives = 486/707 (68%), Gaps = 9/707 (1%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV--SSEKP 73
           VL   LL       C QIRY +PEE+ KGS VG+++ DLG   +EL  R +R+       
Sbjct: 14  VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73

Query: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
            F ++  SG L+ + R+DREE+C     C L  + + E+ +  Y V VE+ DIND+ P F
Sbjct: 74  LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133

Query: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
            ++  E++ISE+A    RF L  A D DIG N+LQ+Y+LSP+ HFSLI +  +DGSKYPE
Sbjct: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193

Query: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
           +VLK  LDRE++ ++HL LTA D G P  + TA+I V+V DANDNAP F+Q  YR S+ E
Sbjct: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253

Query: 254 NVYPGTTVLQVTATDQDEGVNAEITFSF----SEASQITQFDLNSNTGEITVLNTLDFEE 309
           N+  GT +L V ATD DEGVNAE+ +SF     +A+Q+  F L+ N+G I+ +  LD EE
Sbjct: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQV--FKLDCNSGTISTIGELDHEE 311

Query: 310 VKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKV 369
              Y + ++A D  G  A+  V + V+D NDNAPEV+  SL + + E++  GT IALL V
Sbjct: 312 SGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNV 371

Query: 370 RDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPP 429
            D+DS  NG+V C ++G++PFK+  S  N Y LVTD VLDREQ P YNITVTATDRG PP
Sbjct: 372 NDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPP 431

Query: 430 LSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCI 489
           LS+ + I+L++ D NDN PVF Q+SY  ++ ENNP G S+  V A DPD   N Q++Y +
Sbjct: 432 LSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSL 491

Query: 490 MASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 549
             + ++   LSSYVSI++++GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL + 
Sbjct: 492 AENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLF 551

Query: 550 VDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 609
           V D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611

Query: 610 SEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEV 669
           SEPGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ +V
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 671

Query: 670 LPDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRR 715
           L D+     P++ + ++L  YLVVA+A +S +FL  +IL +ALRLRR
Sbjct: 672 LADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR 718


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score =  687 bits (1772), Expect = 0.0
 Identities = 362/707 (51%), Positives = 486/707 (68%), Gaps = 9/707 (1%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV--SSEKP 73
           VL   LL       C QIRY +PEE+ KGS VG+++ DLG   +EL  R +R+       
Sbjct: 14  VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73

Query: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
            F ++  SG L+ + R+DREE+C     C L  + + E+ +  Y V VE+ DIND+ P F
Sbjct: 74  LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133

Query: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
            ++  E++ISE+A    RF L  A D DIG N+LQ+Y+LSP+ HFSLI +  +DGSKYPE
Sbjct: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193

Query: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
           +VLK  LDRE++ ++HL LTA D G P  + TA+I V+V DANDNAP F+Q  YR S+ E
Sbjct: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253

Query: 254 NVYPGTTVLQVTATDQDEGVNAEITFSF----SEASQITQFDLNSNTGEITVLNTLDFEE 309
           N+  GT +L V ATD DEGVNAE+ +SF     +A+Q+  F L+ N+G I+ +  LD EE
Sbjct: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQV--FKLDCNSGTISTIGELDHEE 311

Query: 310 VKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKV 369
              Y + ++A D  G  A+  V + V+D NDNAPEV+  SL + + E++  GT IALL V
Sbjct: 312 SGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNV 371

Query: 370 RDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPP 429
            D+DS  NG+V C ++G++PFK+  S  N Y LVTD VLDREQ P YNITVTATDRG PP
Sbjct: 372 NDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPP 431

Query: 430 LSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCI 489
           LS+ + I+L++ D NDN PVF Q+SY  ++ ENNP G S+  V A DPD   N Q++Y +
Sbjct: 432 LSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSL 491

Query: 490 MASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 549
             + ++   LSSYVSI++++GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL + 
Sbjct: 492 AENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLF 551

Query: 550 VDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 609
           V D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611

Query: 610 SEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEV 669
           SEPGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ +V
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 671

Query: 670 LPDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRR 715
           L D+     P++ + ++L  YLVVA+A +S +FL  +IL +ALRLRR
Sbjct: 672 LADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR 718


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score =  677 bits (1748), Expect = 0.0
 Identities = 367/721 (50%), Positives = 480/721 (66%), Gaps = 16/721 (2%)

Query: 2   GSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQEL 61
           G G GEL       +L   LL   C     QIRY +PEE+ KGS VGN+A DLG   QEL
Sbjct: 7   GWGCGEL-------LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQEL 59

Query: 62  PTRKLRVSSE--KPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHV 119
             R +R+ S      F ++  SG L+ + R+DREE+C + P C + F  + EN +  Y V
Sbjct: 60  AERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGV 119

Query: 120 NVEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFS 179
            VEI DIND+ P+F     +++++E+A  GTR +L  A DAD+G N+L++YQLS + HFS
Sbjct: 120 EVEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFS 179

Query: 180 LINKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNA 239
           L     +DG KYPE+VL+ PLDREK+  + L LTALD G P LS T  I V V DANDNA
Sbjct: 180 LDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNA 239

Query: 240 PVFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSF-SEASQITQ-FDLNSNTG 297
           P+F+   Y VS+ EN+  GT +L +TATD DEG+N ++T+SF +E  +I++ F L+SN G
Sbjct: 240 PLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLG 299

Query: 298 EITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMED 357
           EI+ L +LD+EE + Y + + A+DGG ++A   V V V D NDNAPEVI  SL + I ED
Sbjct: 300 EISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISED 359

Query: 358 AELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYN 417
              GT IAL  V D DS  NGE+ C +  ++PFK+  S  N Y L+T   LDRE+  +YN
Sbjct: 360 CLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYN 419

Query: 418 ITVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDP 477
           IT+T  D G PPLS+ S I L + DVNDN P F Q+SY   V ENNP G SI  V A DP
Sbjct: 420 ITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDP 479

Query: 478 DLGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGS 537
           D G N +V+Y +     +   LSSYVSI++++GV++A R+FD+EQLR  +L + A D G+
Sbjct: 480 DSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGN 539

Query: 538 PALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSG 597
           P LS+NVSL + V D+NDN P +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG
Sbjct: 540 PPLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 599

Query: 598 HNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATAT 657
            NAWLSY +L+ASEPGLF++GL TGEVRTARAL DRDA++Q L+VAV D GQPPLSAT T
Sbjct: 600 QNAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFT 659

Query: 658 LHLVFADSLQEVLPD---ITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLR 714
           + +  AD + ++L D   I    DP DL  +L  YLVVA+A +S +FL  +I+ + LRLR
Sbjct: 660 VTVAVADRIPDILADLGSIKTPIDPEDL--DLTLYLVVAVAAVSCVFLAFVIVLLVLRLR 717

Query: 715 R 715
           R
Sbjct: 718 R 718


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  677 bits (1748), Expect = 0.0
 Identities = 367/721 (50%), Positives = 480/721 (66%), Gaps = 16/721 (2%)

Query: 2   GSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQEL 61
           G G GEL       +L   LL   C     QIRY +PEE+ KGS VGN+A DLG   QEL
Sbjct: 7   GWGCGEL-------LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQEL 59

Query: 62  PTRKLRVSSE--KPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHV 119
             R +R+ S      F ++  SG L+ + R+DREE+C + P C + F  + EN +  Y V
Sbjct: 60  AERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGV 119

Query: 120 NVEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFS 179
            VEI DIND+ P+F     +++++E+A  GTR +L  A DAD+G N+L++YQLS + HFS
Sbjct: 120 EVEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFS 179

Query: 180 LINKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNA 239
           L     +DG KYPE+VL+ PLDREK+  + L LTALD G P LS T  I V V DANDNA
Sbjct: 180 LDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNA 239

Query: 240 PVFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSF-SEASQITQ-FDLNSNTG 297
           P+F+   Y VS+ EN+  GT +L +TATD DEG+N ++T+SF +E  +I++ F L+SN G
Sbjct: 240 PLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLG 299

Query: 298 EITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMED 357
           EI+ L +LD+EE + Y + + A+DGG ++A   V V V D NDNAPEVI  SL + I ED
Sbjct: 300 EISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISED 359

Query: 358 AELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYN 417
              GT IAL  V D DS  NGE+ C +  ++PFK+  S  N Y L+T   LDRE+  +YN
Sbjct: 360 CLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYN 419

Query: 418 ITVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDP 477
           IT+T  D G PPLS+ S I L + DVNDN P F Q+SY   V ENNP G SI  V A DP
Sbjct: 420 ITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDP 479

Query: 478 DLGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGS 537
           D G N +V+Y +     +   LSSYVSI++++GV++A R+FD+EQLR  +L + A D G+
Sbjct: 480 DSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGN 539

Query: 538 PALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSG 597
           P LS+NVSL + V D+NDN P +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG
Sbjct: 540 PPLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 599

Query: 598 HNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATAT 657
            NAWLSY +L+ASEPGLF++GL TGEVRTARAL DRDA++Q L+VAV D GQPPLSAT T
Sbjct: 600 QNAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFT 659

Query: 658 LHLVFADSLQEVLPD---ITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLR 714
           + +  AD + ++L D   I    DP DL  +L  YLVVA+A +S +FL  +I+ + LRLR
Sbjct: 660 VTVAVADRIPDILADLGSIKTPIDPEDL--DLTLYLVVAVAAVSCVFLAFVIVLLVLRLR 717

Query: 715 R 715
           R
Sbjct: 718 R 718


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  677 bits (1747), Expect = 0.0
 Identities = 364/705 (51%), Positives = 481/705 (68%), Gaps = 5/705 (0%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
           VL L LL     A   QIRY IPEE+ KGS VGN+  DLG   QEL    +R+ S     
Sbjct: 14  VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73

Query: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
            F+++  +G L+ + R+DREE+C + P C + F  + E+ LN Y V VEI DIND+TP+F
Sbjct: 74  LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133

Query: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
            +   E++I E+A P +RF L   +D D+G N+LQ ++LS + HFS+  + ++ G KYPE
Sbjct: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193

Query: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
           +VL+  LDRE +  Y L LTA+D G P  SS AQI V V D NDN P+F+Q VYRVS+ E
Sbjct: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253

Query: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEASQ-ITQ-FDLNSNTGEITVLNTLDFEEVK 311
           N+  GT VL VTATDQDEGV+ E+T+SF + ++ I+Q F LN  TGEI+    LD+E+  
Sbjct: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313

Query: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
            Y + +EARDG G+  +  V + ++D NDN PEV+  S    I E A  GT IAL +V D
Sbjct: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373

Query: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
           +DS  NG VTC +   +PF++  S  N Y+LVT+A LDRE+   YNITVTATD+G PPLS
Sbjct: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433

Query: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
           + + I+L++ D NDN P F  SSY V+V ENNP GASI  V A DPD+  N QVSY +  
Sbjct: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493

Query: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
             L+   LSSYVSI++++G+++A R+FD+EQLR  +L + A D G P LS+NVSL + V 
Sbjct: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553

Query: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
           D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613

Query: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
           PGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  AD + ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673

Query: 672 DITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRR 715
           D+    P      ++L  YLVVA+A +S +FL  +I+ +ALRL+R
Sbjct: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQR 718


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score =  677 bits (1747), Expect = 0.0
 Identities = 364/705 (51%), Positives = 481/705 (68%), Gaps = 5/705 (0%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
           VL L LL     A   QIRY IPEE+ KGS VGN+  DLG   QEL    +R+ S     
Sbjct: 14  VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73

Query: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
            F+++  +G L+ + R+DREE+C + P C + F  + E+ LN Y V VEI DIND+TP+F
Sbjct: 74  LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133

Query: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
            +   E++I E+A P +RF L   +D D+G N+LQ ++LS + HFS+  + ++ G KYPE
Sbjct: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193

Query: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
           +VL+  LDRE +  Y L LTA+D G P  SS AQI V V D NDN P+F+Q VYRVS+ E
Sbjct: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253

Query: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEASQ-ITQ-FDLNSNTGEITVLNTLDFEEVK 311
           N+  GT VL VTATDQDEGV+ E+T+SF + ++ I+Q F LN  TGEI+    LD+E+  
Sbjct: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313

Query: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
            Y + +EARDG G+  +  V + ++D NDN PEV+  S    I E A  GT IAL +V D
Sbjct: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373

Query: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
           +DS  NG VTC +   +PF++  S  N Y+LVT+A LDRE+   YNITVTATD+G PPLS
Sbjct: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433

Query: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
           + + I+L++ D NDN P F  SSY V+V ENNP GASI  V A DPD+  N QVSY +  
Sbjct: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493

Query: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
             L+   LSSYVSI++++G+++A R+FD+EQLR  +L + A D G P LS+NVSL + V 
Sbjct: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553

Query: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
           D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613

Query: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
           PGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  AD + ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673

Query: 672 DITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRR 715
           D+    P      ++L  YLVVA+A +S +FL  +I+ +ALRL+R
Sbjct: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQR 718


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  672 bits (1733), Expect = 0.0
 Identities = 350/704 (49%), Positives = 475/704 (67%), Gaps = 5/704 (0%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
           VL   LL +   A   QIRY +PEE  KG +VGN++ DL    +EL  R++R+ S     
Sbjct: 14  VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73

Query: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
            F+++  SG L+ + R+DREE+C + P C + F+ + E+ +  Y + +E+ DIND  PKF
Sbjct: 74  LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133

Query: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
              S E++I+E A PG R+ L  A D D+G N+LQ+YQLSP+ HFSL  +   +G+  PE
Sbjct: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193

Query: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
           +VL+  LDRE+  ++HL LTA D G P  SST +IHV V D NDNAPVF+Q +YRV + E
Sbjct: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253

Query: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEAS--QITQFDLNSNTGEITVLNTLDFEEVK 311
           NV PGT +L  TA+D DEG+N ++ + F + +  Q   F LN NTGEI+   +LD+EE  
Sbjct: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313

Query: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
            Y + ++A DGGG+     V + V D NDN PEV   SL + + EDA  GT I L    D
Sbjct: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373

Query: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
           +DS  NG+V C ++ ++ F +  S  + Y+L+T  +LDRE+  EYNITVTATDRG PPLS
Sbjct: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433

Query: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
           +   ITL + D+NDN P FSQ+SY V++ ENN  G SI  V A DPD   N +V Y +  
Sbjct: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493

Query: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
             ++   LS+YVSI++++GV++A  +FD+EQ R  ++ + A D GSP LS+NVSLR+ V 
Sbjct: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553

Query: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
           D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613

Query: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
           PGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673

Query: 672 DITDRPDPSDLQA-ELQFYLVVALALISVLFLVAMILAIALRLR 714
           D+     P+DL+A +L  YLVVA+A++S +FL  +I  +ALRLR
Sbjct: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLR 717


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score =  672 bits (1733), Expect = 0.0
 Identities = 350/704 (49%), Positives = 475/704 (67%), Gaps = 5/704 (0%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
           VL   LL +   A   QIRY +PEE  KG +VGN++ DL    +EL  R++R+ S     
Sbjct: 14  VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73

Query: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
            F+++  SG L+ + R+DREE+C + P C + F+ + E+ +  Y + +E+ DIND  PKF
Sbjct: 74  LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133

Query: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
              S E++I+E A PG R+ L  A D D+G N+LQ+YQLSP+ HFSL  +   +G+  PE
Sbjct: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193

Query: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
           +VL+  LDRE+  ++HL LTA D G P  SST +IHV V D NDNAPVF+Q +YRV + E
Sbjct: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253

Query: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEAS--QITQFDLNSNTGEITVLNTLDFEEVK 311
           NV PGT +L  TA+D DEG+N ++ + F + +  Q   F LN NTGEI+   +LD+EE  
Sbjct: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313

Query: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
            Y + ++A DGGG+     V + V D NDN PEV   SL + + EDA  GT I L    D
Sbjct: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373

Query: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
           +DS  NG+V C ++ ++ F +  S  + Y+L+T  +LDRE+  EYNITVTATDRG PPLS
Sbjct: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433

Query: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
           +   ITL + D+NDN P FSQ+SY V++ ENN  G SI  V A DPD   N +V Y +  
Sbjct: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493

Query: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
             ++   LS+YVSI++++GV++A  +FD+EQ R  ++ + A D GSP LS+NVSLR+ V 
Sbjct: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553

Query: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
           D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613

Query: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
           PGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673

Query: 672 DITDRPDPSDLQA-ELQFYLVVALALISVLFLVAMILAIALRLR 714
           D+     P+DL+A +L  YLVVA+A++S +FL  +I  +ALRLR
Sbjct: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLR 717


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score =  671 bits (1732), Expect = 0.0
 Identities = 377/813 (46%), Positives = 516/813 (63%), Gaps = 23/813 (2%)

Query: 9   GRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV 68
           G   RL +L    L         QIRY +PEE  KGS VGN++ DLG   +EL  R +R+
Sbjct: 8   GDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRI 67

Query: 69  SS--EKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDI 126
            S  +   F V+  SG L+ + R+DREE+C    +C L  E + E+ L  Y V VEI DI
Sbjct: 68  VSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDI 127

Query: 127 NDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKS 186
           ND+ P F ++  E+++SE A PG RF L +A D D+G N+LQ+YQLSP+++FSL  + ++
Sbjct: 128 NDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRT 187

Query: 187 DGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDV 246
           DG+K PE+VL+  LDREK+ ++ L LTALD G P       I V+V D ND+ P+F+Q V
Sbjct: 188 DGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSV 247

Query: 247 YRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSF----SEASQITQFDLNSNTGEITVL 302
           YRVS+ EN+  GT VL V ATD DEG+N E+ +SF    S+AS+I  F L+S TGE+ V 
Sbjct: 248 YRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEI--FQLDSQTGEVQVR 305

Query: 303 NTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGT 362
            +LDFE+ + Y + ++ +DGGG+    T+ + V+D NDNAPE+   S  N I+E++  GT
Sbjct: 306 GSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGT 365

Query: 363 HIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTA 422
            IALL V+D+DS  NG+V+C +   +PFK+  +  N YKL+T  VLDRE    YNIT+TA
Sbjct: 366 VIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTA 425

Query: 423 TDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPN 482
           TD+G PPLS+ + + L++ D NDN PVF  SSY  ++ ENNP GASI  V A DPD   N
Sbjct: 426 TDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQN 485

Query: 483 GQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 542
             V+Y +    ++   LSSYVSI++ +GV++A ++FD+EQ R  EL + ARD G P LS+
Sbjct: 486 ALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSS 545

Query: 543 NVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWL 602
           NVSL + V D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWL
Sbjct: 546 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWL 605

Query: 603 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVF 662
           SY +L+ASEPGLF++G  TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  
Sbjct: 606 SYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 665

Query: 663 ADSLQEVLPDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRRSSSPAS 721
           ADS+ EVL D+      ++ + ++L  YLVVA+A +S +FLV +I+ +ALRL R      
Sbjct: 666 ADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRL 725

Query: 722 WSCFQPGLC--VKSESVVPPNYSEGTLPYSYNL-CVAHTGKTEFNF--------LKCSEQ 770
               + GL     S  V           YS+ +  +A + K+   F        L   E 
Sbjct: 726 LQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQES 785

Query: 771 LSSGQDILCGDSSGALFPLCNSSELTSHQVSFL 803
               + +L  + S  +   C+    TS+QV F+
Sbjct: 786 CEKSEPLLIAEDSAIILGKCDP---TSNQVRFI 815


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score =  670 bits (1729), Expect = 0.0
 Identities = 358/714 (50%), Positives = 484/714 (67%), Gaps = 9/714 (1%)

Query: 9   GRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV 68
           G   RL +L    L         QIRY +PEE  KGS VGN++ DLG   +EL  R +R+
Sbjct: 8   GDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRI 67

Query: 69  SS--EKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDI 126
            S  +   F V+  SG L+ + R+DREE+C    +C L  E + E+ L  Y V VEI DI
Sbjct: 68  VSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDI 127

Query: 127 NDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKS 186
           ND+ P F ++  E+++SE A PG RF L +A D D+G N+LQ+YQLSP+++FSL  + ++
Sbjct: 128 NDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRT 187

Query: 187 DGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDV 246
           DG+K PE+VL+  LDREK+ ++ L LTALD G P       I V+V D ND+ P+F+Q V
Sbjct: 188 DGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSV 247

Query: 247 YRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSF----SEASQITQFDLNSNTGEITVL 302
           YRVS+ EN+  GT VL V ATD DEG+N E+ +SF    S+AS+I  F L+S TGE+ V 
Sbjct: 248 YRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEI--FQLDSQTGEVQVR 305

Query: 303 NTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGT 362
            +LDFE+ + Y + ++ +DGGG+    T+ + V+D NDNAPE+   S  N I+E++  GT
Sbjct: 306 GSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGT 365

Query: 363 HIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTA 422
            IALL V+D+DS  NG+V+C +   +PFK+  +  N YKL+T  VLDRE    YNIT+TA
Sbjct: 366 VIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTA 425

Query: 423 TDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPN 482
           TD+G PPLS+ + + L++ D NDN PVF  SSY  ++ ENNP GASI  V A DPD   N
Sbjct: 426 TDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQN 485

Query: 483 GQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 542
             V+Y +    ++   LSSYVSI++ +GV++A ++FD+EQ R  EL + ARD G P LS+
Sbjct: 486 ALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSS 545

Query: 543 NVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWL 602
           NVSL + V D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWL
Sbjct: 546 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWL 605

Query: 603 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVF 662
           SY +L+ASEPGLF++G  TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  
Sbjct: 606 SYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 665

Query: 663 ADSLQEVLPDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRR 715
           ADS+ EVL D+      ++ + ++L  YLVVA+A +S +FLV +I+ +ALRL R
Sbjct: 666 ADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWR 719


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  665 bits (1716), Expect = 0.0
 Identities = 349/705 (49%), Positives = 469/705 (66%), Gaps = 5/705 (0%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
           VL  FLL+    A   QIRY + EE+ +GS VGN+A DLG     L  + +R+ S     
Sbjct: 14  VLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQ 73

Query: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
            F ++  SG L+ ++R+DREE+C +   C L F  + E+ L  Y V VEI DIND+ P+F
Sbjct: 74  LFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRF 133

Query: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
                EL+ISE+  PG R  L +AHDAD+G N LQ Y L+P+DHFSL  +  +DG+KYPE
Sbjct: 134 GVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPE 193

Query: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
           +VL+  LDRE++  +HL L A D G P LS T++I V V DANDNAPVF+Q  YR+S+ E
Sbjct: 194 LVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPE 253

Query: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGEITVLNTLDFEEVK 311
           N   GT +L VTATD DEG  A++ +   ++   T   F+L S +GE+T++  LD+E+  
Sbjct: 254 NTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDAT 313

Query: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
            + I +EA+DG G++ +  V V V+D NDNAPE    S  + + ED+  GT I L  V D
Sbjct: 314 FHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHD 373

Query: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
           +DS  N   TC L  D+PFK+  S  N Y+LVT   LDREQ   YNIT+TA D G P LS
Sbjct: 374 RDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLS 433

Query: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
           + + I L + D+NDNAP FS++SY  ++ ENNP GAS+  V A DPD   N  V+Y    
Sbjct: 434 TDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493

Query: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
             ++   LSSY+SI++++GV++A R+FD+EQLR  ++ + ARD G+P LS+NVSL + V 
Sbjct: 494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVL 553

Query: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
           D+NDNAP +LYPA   DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSYH+L+ASE
Sbjct: 554 DQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASE 613

Query: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
           PGLFS+GL TGEVRTARAL DRDA++Q L+VA++D GQPPLSAT TL +  AD + ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILA 673

Query: 672 DITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRR 715
           D+    P      ++L  YLVVA+A +S +FL  +I+ +A RLRR
Sbjct: 674 DLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 718


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score =  665 bits (1716), Expect = 0.0
 Identities = 349/705 (49%), Positives = 469/705 (66%), Gaps = 5/705 (0%)

Query: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
           VL  FLL+    A   QIRY + EE+ +GS VGN+A DLG     L  + +R+ S     
Sbjct: 14  VLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQ 73

Query: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
            F ++  SG L+ ++R+DREE+C +   C L F  + E+ L  Y V VEI DIND+ P+F
Sbjct: 74  LFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRF 133

Query: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
                EL+ISE+  PG R  L +AHDAD+G N LQ Y L+P+DHFSL  +  +DG+KYPE
Sbjct: 134 GVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPE 193

Query: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
           +VL+  LDRE++  +HL L A D G P LS T++I V V DANDNAPVF+Q  YR+S+ E
Sbjct: 194 LVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPE 253

Query: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ--FDLNSNTGEITVLNTLDFEEVK 311
           N   GT +L VTATD DEG  A++ +   ++   T   F+L S +GE+T++  LD+E+  
Sbjct: 254 NTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDAT 313

Query: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
            + I +EA+DG G++ +  V V V+D NDNAPE    S  + + ED+  GT I L  V D
Sbjct: 314 FHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHD 373

Query: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
           +DS  N   TC L  D+PFK+  S  N Y+LVT   LDREQ   YNIT+TA D G P LS
Sbjct: 374 RDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLS 433

Query: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
           + + I L + D+NDNAP FS++SY  ++ ENNP GAS+  V A DPD   N  V+Y    
Sbjct: 434 TDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493

Query: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
             ++   LSSY+SI++++GV++A R+FD+EQLR  ++ + ARD G+P LS+NVSL + V 
Sbjct: 494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVL 553

Query: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
           D+NDNAP +LYPA   DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSYH+L+ASE
Sbjct: 554 DQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASE 613

Query: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
           PGLFS+GL TGEVRTARAL DRDA++Q L+VA++D GQPPLSAT TL +  AD + ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILA 673

Query: 672 DITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRR 715
           D+    P      ++L  YLVVA+A +S +FL  +I+ +A RLRR
Sbjct: 674 DLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 718


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  660 bits (1703), Expect = 0.0
 Identities = 344/704 (48%), Positives = 475/704 (67%), Gaps = 5/704 (0%)

Query: 17  LFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPY 74
           L   LL   C     QIRY + EE+ KGS VGN+A DLG   +EL  R +R+ S      
Sbjct: 15  LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74

Query: 75  FTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFT 134
           F+++ +SG L+ + R+DREE+C + P C ++   + E+ L  + V +EI+DIND+ P F 
Sbjct: 75  FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134

Query: 135 QNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEM 194
               E++I E   PGTRF + +A D D+G N+LQNY+LSP+D+FSL     S+G+KYPE+
Sbjct: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194

Query: 195 VLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSEN 254
           VL+  LDREK++ + L L A D G P  S    I V+V DANDN P+F+Q  YRVS+ EN
Sbjct: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254

Query: 255 VYPGTTVLQVTATDQDEGVNAEITFSFSEA-SQITQ-FDLNSNTGEITVLNTLDFEEVKE 312
           V  GT +L V ATD DEG NA++++   +   +I + F LNS +GE+++L +LD+E+   
Sbjct: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314

Query: 313 YSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRDK 372
           Y I +EA+DG G++++  + V V+D NDNAPE+   SL + + E+  +G  IAL+ V D+
Sbjct: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374

Query: 373 DSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLSS 432
           DS  NG+V   + G++PFK+  S    Y+LVT   LDREQ  EYNI++ A+D G PPLS+
Sbjct: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434

Query: 433 SSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMAS 492
            + ITLH+ D+NDN P F   SY  ++ ENNP GASI  V A DPD   N +++Y +   
Sbjct: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494

Query: 493 DLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDD 552
            L+   LSS+VSI++ +GV++A R+FD+EQ R  +L + A D G+P LS+NVSL + V D
Sbjct: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554

Query: 553 RNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 612
           +NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614

Query: 613 GLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 672
           GLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  AD + ++L D
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674

Query: 673 ITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRR 715
           +    P      ++L  YLVVA+A +S +FL  +I+ +ALRLRR
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 718


>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score =  660 bits (1703), Expect = 0.0
 Identities = 344/704 (48%), Positives = 475/704 (67%), Gaps = 5/704 (0%)

Query: 17  LFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPY 74
           L   LL   C     QIRY + EE+ KGS VGN+A DLG   +EL  R +R+ S      
Sbjct: 15  LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74

Query: 75  FTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFT 134
           F+++ +SG L+ + R+DREE+C + P C ++   + E+ L  + V +EI+DIND+ P F 
Sbjct: 75  FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134

Query: 135 QNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEM 194
               E++I E   PGTRF + +A D D+G N+LQNY+LSP+D+FSL     S+G+KYPE+
Sbjct: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194

Query: 195 VLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSEN 254
           VL+  LDREK++ + L L A D G P  S    I V+V DANDN P+F+Q  YRVS+ EN
Sbjct: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254

Query: 255 VYPGTTVLQVTATDQDEGVNAEITFSFSEA-SQITQ-FDLNSNTGEITVLNTLDFEEVKE 312
           V  GT +L V ATD DEG NA++++   +   +I + F LNS +GE+++L +LD+E+   
Sbjct: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314

Query: 313 YSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRDK 372
           Y I +EA+DG G++++  + V V+D NDNAPE+   SL + + E+  +G  IAL+ V D+
Sbjct: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374

Query: 373 DSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLSS 432
           DS  NG+V   + G++PFK+  S    Y+LVT   LDREQ  EYNI++ A+D G PPLS+
Sbjct: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434

Query: 433 SSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMAS 492
            + ITLH+ D+NDN P F   SY  ++ ENNP GASI  V A DPD   N +++Y +   
Sbjct: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494

Query: 493 DLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDD 552
            L+   LSS+VSI++ +GV++A R+FD+EQ R  +L + A D G+P LS+NVSL + V D
Sbjct: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554

Query: 553 RNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 612
           +NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614

Query: 613 GLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 672
           GLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  AD + ++L D
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674

Query: 673 ITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRR 715
           +    P      ++L  YLVVA+A +S +FL  +I+ +ALRLRR
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 718


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score =  656 bits (1693), Expect = 0.0
 Identities = 347/706 (49%), Positives = 472/706 (66%), Gaps = 9/706 (1%)

Query: 19  LFLLSLFC----PALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--K 72
           L LL LF      A   QI Y IPEE+ KGS VGN++ DLG + +EL  R +R+ S    
Sbjct: 17  LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76

Query: 73  PYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPK 132
             F+++  SG L+ + R+DREE+C +   C + F  + E+ +  + + +E+ DIND+ PK
Sbjct: 77  QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136

Query: 133 FTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYP 192
           F   + +++I+E+   G RF L  A D D+G N+LQ+YQLSP+ HFSL  + +++G KYP
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196

Query: 193 EMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLS 252
           E+VL+  LDRE++  +HL LTA D G P  S T  + V V DANDNAPVF+   YRVS+ 
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256

Query: 253 ENVYPGTTVLQVTATDQDEGVNAEITFSFSEA--SQITQFDLNSNTGEITVLNTLDFEEV 310
           EN+  GT +L VTATD+DEG N E+T+SF +   +Q+ +F LN  TGEI +   LD+EE 
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316

Query: 311 KEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVR 370
             Y I ++A DGG  +A   V + V D NDN+PE+   SL + + ED+ LGT +ALL V 
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376

Query: 371 DKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPL 430
           D DS  NG+VTC +   +PFK+  S  + Y+LV    LDREQ   YNITVTATD G PPL
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436

Query: 431 SSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIM 490
           S+ +   L + D+NDN P FSQ SY  ++ ENN  GASI  V A DPD   N Q+ Y + 
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496

Query: 491 ASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 550
              ++   LSSY+SI++++GV++A R+FD+EQ    ++ + A D G P LS+NVSL + V
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556

Query: 551 DDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 610
            D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616

Query: 611 EPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVL 670
           EPGLF++G  TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ +VL
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676

Query: 671 PDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRR 715
            D+     P++ + ++L  YLVVA+A +S +FL  +I+ +A RLRR
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 722


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score =  656 bits (1693), Expect = 0.0
 Identities = 347/706 (49%), Positives = 472/706 (66%), Gaps = 9/706 (1%)

Query: 19  LFLLSLFC----PALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--K 72
           L LL LF      A   QI Y IPEE+ KGS VGN++ DLG + +EL  R +R+ S    
Sbjct: 17  LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76

Query: 73  PYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPK 132
             F+++  SG L+ + R+DREE+C +   C + F  + E+ +  + + +E+ DIND+ PK
Sbjct: 77  QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136

Query: 133 FTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYP 192
           F   + +++I+E+   G RF L  A D D+G N+LQ+YQLSP+ HFSL  + +++G KYP
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196

Query: 193 EMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLS 252
           E+VL+  LDRE++  +HL LTA D G P  S T  + V V DANDNAPVF+   YRVS+ 
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256

Query: 253 ENVYPGTTVLQVTATDQDEGVNAEITFSFSEA--SQITQFDLNSNTGEITVLNTLDFEEV 310
           EN+  GT +L VTATD+DEG N E+T+SF +   +Q+ +F LN  TGEI +   LD+EE 
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316

Query: 311 KEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVR 370
             Y I ++A DGG  +A   V + V D NDN+PE+   SL + + ED+ LGT +ALL V 
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376

Query: 371 DKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPL 430
           D DS  NG+VTC +   +PFK+  S  + Y+LV    LDREQ   YNITVTATD G PPL
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436

Query: 431 SSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIM 490
           S+ +   L + D+NDN P FSQ SY  ++ ENN  GASI  V A DPD   N Q+ Y + 
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496

Query: 491 ASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 550
              ++   LSSY+SI++++GV++A R+FD+EQ    ++ + A D G P LS+NVSL + V
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556

Query: 551 DDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 610
            D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616

Query: 611 EPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVL 670
           EPGLF++G  TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ +VL
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676

Query: 671 PDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRR 715
            D+     P++ + ++L  YLVVA+A +S +FL  +I+ +A RLRR
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 722


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,437,813
Number of Sequences: 37866
Number of extensions: 1361266
Number of successful extensions: 10509
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 3031
Number of HSP's gapped (non-prelim): 722
length of query: 803
length of database: 18,247,518
effective HSP length: 110
effective length of query: 693
effective length of database: 14,082,258
effective search space: 9759004794
effective search space used: 9759004794
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.